University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P31436.1
Original Database ID ref NP_418115.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation setc_ecoli recname: full=sugar
efflux transporter c
Sequence Length 394

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region14-392
Protein Length394
Template PDB Code4zp0A
Template Region17-400
Sequence Identity15%
E-Value0
GA3410.87
MPQS1.14203
z-DOPE-0.15
TSVMod MethodMSALL
TSVMod RMSD12.766
TSVMod NO350.08
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4zp0
DBALI4zp0A 
JenaImageLibrary4zp0 
Target Sequence
UniProtKBI0ZY63SubName: Full=Putative sugar efflux system;
InterProI0ZY63 
PFAMI0ZY63 
ProdomI0ZY63 
UniProtKBH0QDR8SubName: Full=Predicted sugar efflux system;
InterProH0QDR8 
PFAMH0QDR8 
ProdomH0QDR8 
UniProtKBF9R109SubName: Full=Putative sugar efflux system;
InterProF9R109 
PFAMF9R109 
ProdomF9R109 
UniProtKBC9QUK2SubName: Full=Putative sugar efflux system;SubName: Full=Sugar efflux transporter;Flags: Precursor;
InterProC9QUK2 
PFAMC9QUK2 
ProdomC9QUK2 
UniProtKBM2NLI7SubName: Full=Putative sugar efflux system;
InterProM2NLI7 
PFAMM2NLI7 
ProdomM2NLI7 
UniProtKBG2F2J8SubName: Full=Putative sugar efflux system;
InterProG2F2J8 
PFAMG2F2J8 
ProdomG2F2J8 
UniProtKBA0A0G3HXE5SubName: Full=Putative arabinose efflux transporter protein {ECO:0000313|EMBL:AKK15807.1};
InterProA0A0G3HXE5 
PFAMA0A0G3HXE5 
ProdomA0A0G3HXE5 
UniProtKBP31436RecName: Full=Sugar efflux transporter C;
InterProP31436 
PFAMP31436 
ProdomP31436 
UniProtKBC4ZXQ0SubName: Full=Predicted sugar efflux system;
InterProC4ZXQ0 
PFAMC4ZXQ0 
ProdomC4ZXQ0 
UniProtKBB1X991SubName: Full=Predicted sugar efflux system;
InterProB1X991 
PFAMB1X991 
ProdomB1X991 
UniProtKBQ2M7X1RecName: Full=Sugar efflux transporter C;
InterProQ2M7X1 
PFAMQ2M7X1 
ProdomQ2M7X1 
UniProtKBA0A094W6L1SubName: Full=Sugar efflux transporter C;SubName: Full=Sugar transporter {ECO:0000313|EMBL:AKO54835.1};
InterProA0A094W6L1 
PFAMA0A094W6L1 
ProdomA0A094W6L1 
UniProtKBC4ZXQ0SubName: Full=Predicted sugar efflux system;
InterProC4ZXQ0 
PFAMC4ZXQ0 
ProdomC4ZXQ0 
UniProtKBF9R109SubName: Full=Putative sugar efflux system;
InterProF9R109 
PFAMF9R109 
ProdomF9R109 
UniProtKBG2F2J8SubName: Full=Putative sugar efflux system;
InterProG2F2J8 
PFAMG2F2J8 
ProdomG2F2J8 
UniProtKBA0A8F9MQU8SubName: Full=Sugar efflux transporter {ECO:0000313|EMBL:QYE25785.1}
InterProA0A8F9MQU8 
PFAMA0A8F9MQU8 
ProdomA0A8F9MQU8 
UniProtKBH0QDR8SubName: Full=Predicted sugar efflux system;
InterProH0QDR8 
PFAMH0QDR8 
ProdomH0QDR8 
UniProtKBI0ZY63SubName: Full=Putative sugar efflux system;
InterProI0ZY63 
PFAMI0ZY63 
ProdomI0ZY63 
UniProtKBA0A8F8DFV3SubName: Full=Sugar efflux transporter {ECO:0000313|EMBL:QXZ37007.1}
InterProA0A8F8DFV3 
PFAMA0A8F8DFV3 
ProdomA0A8F8DFV3 
UniProtKBA0A5Q3TEF5SubName: Full=Sugar efflux transporter {ECO:0000313|EMBL:QGL42858.1}
InterProA0A5Q3TEF5 
PFAMA0A5Q3TEF5 
ProdomA0A5Q3TEF5 
UniProtKBA0A2S5ZN63SubName: Full=Sugar efflux transporter {ECO:0000313|EMBL:QGF36266.1}SubName: Full=Sugar efflux transporter C {ECO:0000313|EMBL:SVF30257.1}SubName: Full=Sugar efflux transporter SetB {ECO:0000313|EMBL:
InterProA0A2S5ZN63 
PFAMA0A2S5ZN63 
ProdomA0A2S5ZN63 
UniProtKBC9QUK2SubName: Full=Putative sugar efflux system;SubName: Full=Sugar efflux transporter;Flags: Precursor;
InterProC9QUK2 
PFAMC9QUK2 
ProdomC9QUK2 
UniProtKBQ2M7X1Predicted sugar efflux system
InterProQ2M7X1 
PFAMQ2M7X1 
ProdomQ2M7X1 
UniProtKBA0A8F7S7I4SubName: Full=Sugar efflux transporter {ECO:0000313|EMBL:QXW73535.1}
InterProA0A8F7S7I4 
PFAMA0A8F7S7I4 
ProdomA0A8F7S7I4 
UniProtKBB1X991SubName: Full=Predicted sugar efflux system;
InterProB1X991 
PFAMB1X991 
ProdomB1X991 
UniProtKBP31436.1SETC_ECOLI RecName: Full=Sugar efflux transporter C
InterProP31436.1 
PFAMP31436.1 
ProdomP31436.1 
UniProtKBQ2M7X1RecName: Full=Sugar efflux transporter C;
InterProQ2M7X1 
PFAMQ2M7X1 
ProdomQ2M7X1 
UniProtKBP31436RecName: Full=Sugar efflux transporter C;
InterProP31436 
PFAMP31436 
ProdomP31436 
RefSeqAP_004134.1 predicted sugar efflux system [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_001732485.1 sugar efflux system [Escherichia coli str. K-12 substr. DH10B]
RefSeqNP_418115.1 predicted sugar efflux system [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_002928545.1 putative sugar efflux system [Escherichia coli BW2952]
GenPept85676385predicted sugar efflux system
GenPept89110354 predicted sugar efflux system [Escherichia coli str. K-12 substr. W3110]
GenPept899724542sugar transporter
GenPept899728896sugar transporter
GenPept899733383sugar transporter
GenPept932861768Sugar efflux transporter B
GenPept300625590unnamed protein product
GenPept808724172sugar transporter
GenPept827620073putative arabinose efflux transporter protein
GenPept16131529 predicted sugar efflux system [Escherichia coli str. K-12 substr. MG1655]
GenPept401588SETC_ECOLI RecName: Full=Sugar efflux transporter C
GenPept549814992putative arabinose efflux transporter
GenPept549887554Sequence 563 from patent US 8541208
GenPept557273146putative sugar efflux system
GenPept682121058putative arabinose efflux transporter
GenPept687674392YicK MFS Transporter
GenPept687678754YicK MFS Transporter
GenPept730584861putative arabinose efflux transporter
GenPept359333803predicted sugar efflux system
GenPept315138240putative sugar efflux system
GenPept290508similar to unidentified ORF near 47 minutes
GenPept169891000predicted sugar efflux system
GenPept170083165 sugar efflux system [Escherichia coli str. K-12 substr. DH10B]
GenPept1790091putative arabinose efflux transporter
GenPept227482332unnamed protein product
GenPept238863114predicted sugar efflux system
GenPept238902749 putative sugar efflux system [Escherichia coli BW2952]
GenPept259427103unnamed protein product
GenPept260447322sugar efflux transporter
GenPept731472589putative arabinose efflux transporter
GenPept732686735sugar transporter
GenPept7466817D65167 probable membrane protein yicK - Escherichia coli
GenPept808715390sugar transporter
GenPept808719802sugar transporter
GenPept808732488sugar transporter
GenPept808736925sugar transporter
GenPept817576829putative arabinose efflux transporter
GenPept817580971putative arabinose efflux transporter
GenPept817585110putative arabinose efflux transporter
GenPept817589251putative arabinose efflux transporter
GenPept817593391putative arabinose efflux transporter
GenPept808711021sugar transporter
GenPept808706669sugar transporter
GenPept756728620Sequence 3404 from patent US 8809059
GenPept664685993sugar transporter
GenPept827618603putative arabinose efflux transporter protein
GenPept802136963putative arabinose efflux transporter
GenPept808702296sugar transporter
GenBankAAC76682.1 predicted sugar efflux system [Escherichia coli str. K-12 substr. MG1655]
GenBankAAA62011.1 similar to unidentified ORF near 47 minutes [Escherichia coli]
GenBankACB04707.1 predicted sugar efflux system [Escherichia coli str. K-12 substr. DH10B]
GenBankACX37744.1 sugar efflux transporter [Escherichia coli DH1]
GenBankACR65112.1 predicted sugar efflux system [Escherichia coli BW2952]