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Sequence Information

Primary Database Link A0A094VQV5
Original Database ID ref NP_417111.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=integrase {eco:0000313|embl:ako58122.1};subname:
full=prophage cp4 -57 integrase;
Sequence Length 413

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region106-365
Protein Length413
Template PDB Code1z19A
Template Region75-335
Sequence Identity13%
E-Value0
GA3411
MPQS0.75934
z-DOPE0.13
TSVMod MethodMSALL
TSVMod RMSD7.428
TSVMod NO350.541
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1z19crystal structure of a lambda integrase(75-356) dimer bound to a coc' core site
DBALI1z19A 
CATH1.10.150.130 Domain: 1z19A01 DNA polymerase; domain 1 (100%)
CATH1.10.443.10 Domain: 1z19A02 Intergrase catalytic core (87%)
JenaImageLibrary1z19 
Target Sequence
UniProtKBC4ZYN8SubName: Full=CP4-57 prophage; integrase;
InterProC4ZYN8 
PFAMC4ZYN8 
ProdomC4ZYN8 
UniProtKBA0A0G3I526SubName: Full=CP4-57 prophage integrase protein {ECO:0000313|EMBL:AKK18512.1};
InterProA0A0G3I526 
PFAMA0A0G3I526 
ProdomA0A0G3I526 
UniProtKBC9R105SubName: Full=Integrase;SubName: Full=Integrase family protein;
InterProC9R105 
PFAMC9R105 
ProdomC9R105 
UniProtKBF9QWI6SubName: Full=Integrase;
InterProF9QWI6 
PFAMF9QWI6 
ProdomF9QWI6 
UniProtKBG2F773SubName: Full=Integrase;
InterProG2F773 
PFAMG2F773 
ProdomG2F773 
UniProtKBA0A094VQV5SubName: Full=Integrase {ECO:0000313|EMBL:AKO58122.1};SubName: Full=Prophage CP4-57 integrase;
InterProA0A094VQV5 
PFAMA0A094VQV5 
ProdomA0A094VQV5 
UniProtKBI0ZWP3SubName: Full=Integrase;
InterProI0ZWP3 
PFAMI0ZWP3 
ProdomI0ZWP3 
UniProtKBM2MPK3SubName: Full=Integrase;
InterProM2MPK3 
PFAMM2MPK3 
ProdomM2MPK3 
UniProtKBS1IB54SubName: Full=Prophage integrase {ECO:0000313|EMBL:EOW17059.1};
InterProS1IB54 
PFAMS1IB54 
ProdomS1IB54 
UniProtKBP32053RecName: Full=Prophage CP4-57 integrase;
InterProP32053 
PFAMP32053 
ProdomP32053 
UniProtKBA0A8F9HD04SubName: Full=Integrase {ECO:0000313|EMBL:QYE26740.1}
InterProA0A8F9HD04 
PFAMA0A8F9HD04 
ProdomA0A8F9HD04 
UniProtKBA0A5Q3TBJ8SubName: Full=Tyrosine-type recombinase/integrase {ECO:0000313|EMBL:QGL41904.1}
InterProA0A5Q3TBJ8 
PFAMA0A5Q3TBJ8 
ProdomA0A5Q3TBJ8 
UniProtKBC4ZYN8SubName: Full=CP4-57 prophage; integrase;
InterProC4ZYN8 
PFAMC4ZYN8 
ProdomC4ZYN8 
UniProtKBC9R105SubName: Full=Integrase;SubName: Full=Integrase family protein;
InterProC9R105 
PFAMC9R105 
ProdomC9R105 
UniProtKBA0A8F8GZM5SubName: Full=Integrase {ECO:0000313|EMBL:QXZ37961.1}
InterProA0A8F8GZM5 
PFAMA0A8F8GZM5 
ProdomA0A8F8GZM5 
UniProtKBF9QWI6SubName: Full=Integrase;
InterProF9QWI6 
PFAMF9QWI6 
ProdomF9QWI6 
UniProtKBG2F773SubName: Full=Integrase;
InterProG2F773 
PFAMG2F773 
ProdomG2F773 
UniProtKBA0A4V5URN3SubName: Full=Integrase {ECO:0000313|EMBL:GCU35883.1}SubName: Full=Tyrosine-type recombinase/integrase {ECO:0000313|EMBL:QGF37202.1}
InterProA0A4V5URN3 
PFAMA0A4V5URN3 
ProdomA0A4V5URN3 
UniProtKBI0ZWP3SubName: Full=Integrase;
InterProI0ZWP3 
PFAMI0ZWP3 
ProdomI0ZWP3 
UniProtKBP32053RecName: Full=Prophage CP4-57 integrase;
InterProP32053 
PFAMP32053 
ProdomP32053 
UniProtKBP32053.2INTA_ECOLI RecName: Full=Prophage CP4-57 integrase
InterProP32053.2 
PFAMP32053.2 
ProdomP32053.2 
RefSeqAP_003201.1 integrase [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002927576.1 CP4-57 prophage; integrase [Escherichia coli BW2952]
RefSeqNP_417111.1 CP4-57 prophage; integrase [Escherichia coli str. K-12 substr. MG1655]
GenPept827622778CP4-57 prophage integrase protein
GenPept85675485integrase
GenPept89109421 integrase [Escherichia coli str. K-12 substr. W3110]
GenPept899723559integrase
GenPept899727914integrase
GenPept899732362integrase
GenPept464767INTA_ECOLI RecName: Full=Prophage CP4-57 integrase
GenPept808731513integrase
GenPept827619450CP4-57 prophage integrase protein
GenPept817592426CP4-57 prophage, integrase
GenPept732683514integrase
GenPept731471557CP4-57 prophage; integrase
GenPept730583828CP4-57 prophage; integrase
GenPept687677750CP4-57 prophage; integrase
GenPept687673465CP4-57 prophage; integrase
GenPept682120092CP4-57 prophage; integrase
GenPept664684916integrase
GenPept557274114integrase
GenPept549814036CP4-57 prophage; integrase
GenPept433349SlpA integrase
GenPept315137238integrase
GenPept260448306integrase family protein
GenPept238901780 CP4-57 prophage; integrase [Escherichia coli BW2952]
GenPept238860623CP4-57 prophage; integrase
GenPept1788974CP4-57 prophage; integrase
GenPept16130540 CP4-57 prophage; integrase [Escherichia coli str. K-12 substr. MG1655]
GenPept7444569H65040 slpA integrase - Escherichia coli
GenPept1033117SlpA integrase
GenPept817588286CP4-57 prophage, integrase
GenPept817584145CP4-57 prophage, integrase
GenPept817580006CP4-57 prophage, integrase
GenPept817575864CP4-57 prophage, integrase
GenPept808735942integrase
GenPept808723197integrase
GenPept808718825integrase
GenPept808714415integrase
GenPept808710053integrase
GenPept808705693integrase
GenPept808701319integrase
GenPept802136001CP4-57 prophage; integrase
GenBankAAA18417.1 SlpA integrase [Escherichia coli]
GenBankAAA79791.1 SlpA integrase [Escherichia coli str. K-12 substr. MG1655]
GenBankAAC75670.1 CP4-57 prophage; integrase [Escherichia coli str. K-12 substr. MG1655]
GenBankACR62621.1 CP4-57 prophage; integrase [Escherichia coli BW2952]
GenBankACX38728.1 integrase family protein [Escherichia coli DH1]