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Sequence Information

Primary Database Link P32684.1
Original Database ID ref NP_418446.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation rluf_ecoli recname: full=ribosomal
large subunit pseudouridine synthase
f; altna me: full=rrna pseudouridylate
synthase f; altname: full=rrna-uridine
...
Sequence Length 290

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region4-243
Protein Length290
Template PDB Code3dh3A
Template Region4-243
Sequence Identity100%
E-Value0
GA3411
MPQS2.02929
z-DOPE-1.09
TSVMod MethodMSALL
TSVMod RMSD1.109
TSVMod NO350.95
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3dh3crystal structure of rluf in complex with a 22 nucleotide rna substrate
DBALI3dh3A 
JenaImageLibrary3dh3 
Target Sequence
UniProtKBN2U014RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2U014 
PFAMN2U014 
ProdomN2U014 
UniProtKBI2PEA5RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProI2PEA5 
PFAMI2PEA5 
ProdomI2PEA5 
UniProtKBI2XFF4RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProI2XFF4 
PFAMI2XFF4 
ProdomI2XFF4 
UniProtKBI2I0N8RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProI2I0N8 
PFAMI2I0N8 
ProdomI2I0N8 
UniProtKBI0ZLI6RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProI0ZLI6 
PFAMI0ZLI6 
ProdomI0ZLI6 
UniProtKBK5BM40RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProK5BM40 
PFAMK5BM40 
ProdomK5BM40 
UniProtKBK3HPB3RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProK3HPB3 
PFAMK3HPB3 
ProdomK3HPB3 
UniProtKBI4U7L8RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProI4U7L8 
PFAMI4U7L8 
ProdomI4U7L8 
UniProtKBL3W6G7RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL3W6G7 
PFAML3W6G7 
ProdomL3W6G7 
UniProtKBL3VTS3RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL3VTS3 
PFAML3VTS3 
ProdomL3VTS3 
UniProtKBL4W2Q3RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL4W2Q3 
PFAML4W2Q3 
ProdomL4W2Q3 
UniProtKBA0A0E3H4H7RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A0E3H4H7 
PFAMA0A0E3H4H7 
ProdomA0A0E3H4H7 
UniProtKBA0A0E1M6C3RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A0E1M6C3 
PFAMA0A0E1M6C3 
ProdomA0A0E1M6C3 
UniProtKBH4US55RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProH4US55 
PFAMH4US55 
ProdomH4US55 
UniProtKBE9WY19RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProE9WY19 
PFAME9WY19 
ProdomE9WY19 
UniProtKBE9Y409RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProE9Y409 
PFAME9Y409 
ProdomE9Y409 
UniProtKBN2UBE6RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2UBE6 
PFAMN2UBE6 
ProdomN2UBE6 
UniProtKBN2UDA9RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2UDA9 
PFAMN2UDA9 
ProdomN2UDA9 
UniProtKBG2B2V0RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProG2B2V0 
PFAMG2B2V0 
ProdomG2B2V0 
UniProtKBG2BGU7RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProG2BGU7 
PFAMG2BGU7 
ProdomG2BGU7 
UniProtKBN3ISS4RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN3ISS4 
PFAMN3ISS4 
ProdomN3ISS4 
UniProtKBG2F6A4RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProG2F6A4 
PFAMG2F6A4 
ProdomG2F6A4 
UniProtKBN2ZZF8RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2ZZF8 
PFAMN2ZZF8 
ProdomN2ZZF8 
UniProtKBN2HBB2RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2HBB2 
PFAMN2HBB2 
ProdomN2HBB2 
UniProtKBL3R6J5RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL3R6J5 
PFAML3R6J5 
ProdomL3R6J5 
UniProtKBH4W4D3RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProH4W4D3 
PFAMH4W4D3 
ProdomH4W4D3 
UniProtKBA0A070UVP8RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A070UVP8 
PFAMA0A070UVP8 
ProdomA0A070UVP8 
UniProtKBA0A070YAP4RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A070YAP4 
PFAMA0A070YAP4 
ProdomA0A070YAP4 
UniProtKBA0A071AVF9RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A071AVF9 
PFAMA0A071AVF9 
ProdomA0A071AVF9 
UniProtKBA0A071CBV1RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A071CBV1 
PFAMA0A071CBV1 
ProdomA0A071CBV1 
UniProtKBA0A071CL91RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A071CL91 
PFAMA0A071CL91 
ProdomA0A071CL91 
UniProtKBA0A071D849RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A071D849 
PFAMA0A071D849 
ProdomA0A071D849 
UniProtKBA0A073GJ05RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A073GJ05 
PFAMA0A073GJ05 
ProdomA0A073GJ05 
UniProtKBA0A073T9W0RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A073T9W0 
PFAMA0A073T9W0 
ProdomA0A073T9W0 
UniProtKBA0A074HIG5RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A074HIG5 
PFAMA0A074HIG5 
ProdomA0A074HIG5 
UniProtKBA0A074IAR0RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A074IAR0 
PFAMA0A074IAR0 
ProdomA0A074IAR0 
UniProtKBA0A070SZV8RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A070SZV8 
PFAMA0A070SZV8 
ProdomA0A070SZV8 
UniProtKBA0A069Z061RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A069Z061 
PFAMA0A069Z061 
ProdomA0A069Z061 
UniProtKBA0A069XFN2RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A069XFN2 
PFAMA0A069XFN2 
ProdomA0A069XFN2 
UniProtKBM2NXA3RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProM2NXA3 
PFAMM2NXA3 
ProdomM2NXA3 
UniProtKBB1XC21RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProB1XC21 
PFAMB1XC21 
ProdomB1XC21 
UniProtKBC1NAP3RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProC1NAP3 
PFAMC1NAP3 
ProdomC1NAP3 
UniProtKBM9DK57RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProM9DK57 
PFAMM9DK57 
ProdomM9DK57 
UniProtKBM9GLJ8RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProM9GLJ8 
PFAMM9GLJ8 
ProdomM9GLJ8 
UniProtKBC5A0V9RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProC5A0V9 
PFAMC5A0V9 
ProdomC5A0V9 
UniProtKBC5WBQ6SubName: Full=Pseudouridine synthase {ECO:0000313|EMBL:ACT31000.1};
InterProC5WBQ6 
PFAMC5WBQ6 
ProdomC5WBQ6 
UniProtKBN2EGD5RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2EGD5 
PFAMN2EGD5 
ProdomN2EGD5 
UniProtKBC6EE02SubName: Full=Pseudouridine synthase {ECO:0000313|EMBL:ACT31000.1};
InterProC6EE02 
PFAMC6EE02 
ProdomC6EE02 
UniProtKBA0A024L713RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A024L713 
PFAMA0A024L713 
ProdomA0A024L713 
UniProtKBA0A077ZJ21SubName: Full=PseudoU synth 2 and S4 domain containing protein {ECO:0000313|EMBL:CDW59618.1};
InterProA0A077ZJ21 
PFAMA0A077ZJ21 
ProdomA0A077ZJ21 
UniProtKBN2TC45RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2TC45 
PFAMN2TC45 
ProdomN2TC45 
UniProtKBA0A079CL49RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A079CL49 
PFAMA0A079CL49 
ProdomA0A079CL49 
UniProtKBG2CSR9RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProG2CSR9 
PFAMG2CSR9 
ProdomG2CSR9 
UniProtKBA0A080GL53RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A080GL53 
PFAMA0A080GL53 
ProdomA0A080GL53 
UniProtKBI2YFK1RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProI2YFK1 
PFAMI2YFK1 
ProdomI2YFK1 
UniProtKBL3LTZ4RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL3LTZ4 
PFAML3LTZ4 
ProdomL3LTZ4 
UniProtKBL4PR97RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL4PR97 
PFAML4PR97 
ProdomL4PR97 
UniProtKBL8CE32RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL8CE32 
PFAML8CE32 
ProdomL8CE32 
UniProtKBM7UFL5RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProM7UFL5 
PFAMM7UFL5 
ProdomM7UFL5 
UniProtKBC6UJP6RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProC6UJP6 
PFAMC6UJP6 
ProdomC6UJP6 
UniProtKBD7ZTH0RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProD7ZTH0 
PFAMD7ZTH0 
ProdomD7ZTH0 
UniProtKBD8BRV7RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProD8BRV7 
PFAMD8BRV7 
ProdomD8BRV7 
UniProtKBN2VI16RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2VI16 
PFAMN2VI16 
ProdomN2VI16 
UniProtKBN2U7X2RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2U7X2 
PFAMN2U7X2 
ProdomN2U7X2 
UniProtKBN2SKB9RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2SKB9 
PFAMN2SKB9 
ProdomN2SKB9 
UniProtKBA0A079F3H0RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A079F3H0 
PFAMA0A079F3H0 
ProdomA0A079F3H0 
UniProtKBN2NR37RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2NR37 
PFAMN2NR37 
ProdomN2NR37 
UniProtKBA0A079FTT0RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A079FTT0 
PFAMA0A079FTT0 
ProdomA0A079FTT0 
UniProtKBM7VFN9RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProM7VFN9 
PFAMM7VFN9 
ProdomM7VFN9 
UniProtKBD8B608RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProD8B608 
PFAMD8B608 
ProdomD8B608 
UniProtKBF9QYR6RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProF9QYR6 
PFAMF9QYR6 
ProdomF9QYR6 
UniProtKBA0A079H5D7RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A079H5D7 
PFAMA0A079H5D7 
ProdomA0A079H5D7 
UniProtKBL3L7J0RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProL3L7J0 
PFAML3L7J0 
ProdomL3L7J0 
UniProtKBB3XC99RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProB3XC99 
PFAMB3XC99 
ProdomB3XC99 
UniProtKBN2GCR5RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2GCR5 
PFAMN2GCR5 
ProdomN2GCR5 
UniProtKBN2TQV4RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2TQV4 
PFAMN2TQV4 
ProdomN2TQV4 
UniProtKBE9WJS4RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProE9WJS4 
PFAME9WJS4 
ProdomE9WJS4 
UniProtKBH4V8T1RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProH4V8T1 
PFAMH4V8T1 
ProdomH4V8T1 
UniProtKBL8C483RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL8C483 
PFAML8C483 
ProdomL8C483 
UniProtKBH4VP93RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProH4VP93 
PFAMH4VP93 
ProdomH4VP93 
UniProtKBH4WJG1RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProH4WJG1 
PFAMH4WJG1 
ProdomH4WJG1 
UniProtKBN2FQ88RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2FQ88 
PFAMN2FQ88 
ProdomN2FQ88 
UniProtKBC9QV57RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProC9QV57 
PFAMC9QV57 
ProdomC9QV57 
UniProtKBI2ZKU6RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProI2ZKU6 
PFAMI2ZKU6 
ProdomI2ZKU6 
UniProtKBD8AHL6RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProD8AHL6 
PFAMD8AHL6 
ProdomD8AHL6 
UniProtKBN2Q7Y4RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProN2Q7Y4 
PFAMN2Q7Y4 
ProdomN2Q7Y4 
UniProtKBE1HKQ3RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProE1HKQ3 
PFAME1HKQ3 
ProdomE1HKQ3 
UniProtKBM9BDA7RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProM9BDA7 
PFAMM9BDA7 
ProdomM9BDA7 
UniProtKBL4ACU3RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL4ACU3 
PFAML4ACU3 
ProdomL4ACU3 
UniProtKBL3X9W0RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL3X9W0 
PFAML3X9W0 
ProdomL3X9W0 
UniProtKBN2K7T2RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN2K7T2 
PFAMN2K7T2 
ProdomN2K7T2 
UniProtKBG0F2W8RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProG0F2W8 
PFAMG0F2W8 
ProdomG0F2W8 
UniProtKBN3L2A1RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProN3L2A1 
PFAMN3L2A1 
ProdomN3L2A1 
UniProtKBH0QFN6RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProH0QFN6 
PFAMH0QFN6 
ProdomH0QFN6 
UniProtKBA0A080HRW8RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProA0A080HRW8 
PFAMA0A080HRW8 
ProdomA0A080HRW8 
UniProtKBA0A0G3HYB4SubName: Full=23S rRNA pseudouridine(2604) synthase protein {ECO:0000313|EMBL:AKK16107.1};
InterProA0A0G3HYB4 
PFAMA0A0G3HYB4 
ProdomA0A0G3HYB4 
UniProtKBI2R870RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProI2R870 
PFAMI2R870 
ProdomI2R870 
UniProtKBK3I9D5RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProK3I9D5 
PFAMK3I9D5 
ProdomK3I9D5 
UniProtKBL2ZQK4RecName: Full=Pseudouridine synthase;EC=5.4.99.-;
InterProL2ZQK4 
PFAML2ZQK4 
ProdomL2ZQK4 
UniProtKBE3PBY7RecName: Full=Pseudouridine synthase {ECO:0000256|RuleBase:RU003887};EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};
InterProE3PBY7 
PFAME3PBY7 
ProdomE3PBY7