University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P33218.2
Original Database ID ref NP_416360.1
Organism Escherichia coli, Shigella sonnei, etc.
Annotation yebe_ecoli recname: full=inner
membrane protein yebe
Sequence Length 219

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region125-212
Protein Length219
Template PDB Code4dciA
Template Region36-146
Sequence Identity36%
E-Value0.32
GA3410.07
MPQS0.334526
z-DOPE1.16
TSVMod MethodMSALL
TSVMod RMSD14.691
TSVMod NO350.05
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4dci
DBALI4dciA 
JenaImageLibrary4dci 
Target Sequence
UniProtKBW1BQ60SubName: Full=FIG004088: inner membrane protein YebE {ECO:0000313|EMBL:CDK81725.1};
InterProW1BQ60 
PFAMW1BQ60 
ProdomW1BQ60 
UniProtKBA0A070T6M1SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KDX21648.1};
InterProA0A070T6M1 
PFAMA0A070T6M1 
ProdomA0A070T6M1 
UniProtKBA0A070YAP1SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KDX88050.1};
InterProA0A070YAP1 
PFAMA0A070YAP1 
ProdomA0A070YAP1 
UniProtKBA0A071AY22SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KDY61665.1};
InterProA0A071AY22 
PFAMA0A071AY22 
ProdomA0A071AY22 
UniProtKBA0A073TQE6SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KEL22311.1};
InterProA0A073TQE6 
PFAMA0A073TQE6 
ProdomA0A073TQE6 
UniProtKBA0A074HUI5SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KEN98663.1};
InterProA0A074HUI5 
PFAMA0A074HUI5 
ProdomA0A074HUI5 
UniProtKBA0A079FTK4SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KDY64294.1};
InterProA0A079FTK4 
PFAMA0A079FTK4 
ProdomA0A079FTK4 
UniProtKBA0A080GXC1SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KEN90610.1};
InterProA0A080GXC1 
PFAMA0A080GXC1 
ProdomA0A080GXC1 
UniProtKBA0A080IBB2SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KEO24118.1};
InterProA0A080IBB2 
PFAMA0A080IBB2 
ProdomA0A080IBB2 
UniProtKBA0A094XWK2SubName: Full=Inner membrane protein YebE {ECO:0000313|EMBL:KGM81026.1};SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:CEE03813.1};SubName: Full=Membrane protein {ECO:0000313|EMBL:AJB5196
InterProA0A094XWK2 
PFAMA0A094XWK2 
ProdomA0A094XWK2 
UniProtKBA0A069Z7R4SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KDU54954.1};
InterProA0A069Z7R4 
PFAMA0A069Z7R4 
ProdomA0A069Z7R4 
UniProtKBA0A069XI63SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KDU28823.1};
InterProA0A069XI63 
PFAMA0A069XI63 
ProdomA0A069XI63 
UniProtKBI2ZUP6SubName: Full=PF04391 family protein;
InterProI2ZUP6 
PFAMI2ZUP6 
ProdomI2ZUP6 
UniProtKBL2ZAI5SubName: Full=Inner membrane protein yebE;
InterProL2ZAI5 
PFAML2ZAI5 
ProdomL2ZAI5 
UniProtKBL3KMX5SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:ELE00266.1};
InterProL3KMX5 
PFAML3KMX5 
ProdomL3KMX5 
UniProtKBL3RK72SubName: Full=Inner membrane protein yebE;
InterProL3RK72 
PFAML3RK72 
ProdomL3RK72 
UniProtKBL3VGC3SubName: Full=Inner membrane protein yebE;
InterProL3VGC3 
PFAML3VGC3 
ProdomL3VGC3 
UniProtKBL3ZXV4SubName: Full=Inner membrane protein yebE;
InterProL3ZXV4 
PFAML3ZXV4 
ProdomL3ZXV4 
UniProtKBL4P342SubName: Full=Inner membrane protein yebE;
InterProL4P342 
PFAML4P342 
ProdomL4P342 
UniProtKBL8BZS6SubName: Full=FIG004088: inner membrane protein YebE;
InterProL8BZS6 
PFAML8BZS6 
ProdomL8BZS6 
UniProtKBM2MY03SubName: Full=Uncharacterized protein;
InterProM2MY03 
PFAMM2MY03 
ProdomM2MY03 
UniProtKBA0A0E3KMR9SubName: Full=Inner membrane protein YebE {ECO:0000313|EMBL:AKA90865.1};
InterProA0A0E3KMR9 
PFAMA0A0E3KMR9 
ProdomA0A0E3KMR9 
UniProtKBA0A0G3HYS1SubName: Full=Inner membrane protein, DUF533 family protein {ECO:0000313|EMBL:AKK17890.1};
InterProA0A0G3HYS1 
PFAMA0A0G3HYS1 
ProdomA0A0G3HYS1 
UniProtKBS1L7W4SubName: Full=Inner membrane protein yebE;
InterProS1L7W4 
PFAMS1L7W4 
ProdomS1L7W4 
UniProtKBF9QVB3SubName: Full=Putative uncharacterized protein;
InterProF9QVB3 
PFAMF9QVB3 
ProdomF9QVB3 
UniProtKBS0UBU0SubName: Full=Inner membrane protein yebE;
InterProS0UBU0 
PFAMS0UBU0 
ProdomS0UBU0 
UniProtKBB1XHB4SubName: Full=Conserved protein;
InterProB1XHB4 
PFAMB1XHB4 
ProdomB1XHB4 
UniProtKBC4ZZK3SubName: Full=Conserved protein;
InterProC4ZZK3 
PFAMC4ZZK3 
ProdomC4ZZK3 
UniProtKBC9QT92SubName: Full=Uncharacterized protein;Flags: Precursor;
InterProC9QT92 
PFAMC9QT92 
ProdomC9QT92 
UniProtKBD8AVC0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK12912.1};
InterProD8AVC0 
PFAMD8AVC0 
ProdomD8AVC0 
UniProtKBD8B3K1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ66309.1};
InterProD8B3K1 
PFAMD8B3K1 
ProdomD8B3K1 
UniProtKBD8BYH2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFI88308.1};
InterProD8BYH2 
PFAMD8BYH2 
ProdomD8BYH2 
UniProtKBE1HMF5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK90875.1};
InterProE1HMF5 
PFAME1HMF5 
ProdomE1HMF5 
UniProtKBS1K7G8SubName: Full=Inner membrane protein yebE;
InterProS1K7G8 
PFAMS1K7G8 
ProdomS1K7G8 
UniProtKBF4SL00SubName: Full=Inner membrane protein YebE {ECO:0000313|EMBL:EGI11475.1};
InterProF4SL00 
PFAMF4SL00 
ProdomF4SL00 
UniProtKBS1P500SubName: Full=Inner membrane protein yebE;
InterProS1P500 
PFAMS1P500 
ProdomS1P500 
UniProtKBT7JUP3SubName: Full=Inner membrane protein yebE;
InterProT7JUP3 
PFAMT7JUP3 
ProdomT7JUP3 
UniProtKBT8XI26SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:EQX52546.1};
InterProT8XI26 
PFAMT8XI26 
ProdomT8XI26 
UniProtKBT9IDV8SubName: Full=Inner membrane protein yebE;
InterProT9IDV8 
PFAMT9IDV8 
ProdomT9IDV8 
UniProtKBT9JI86SubName: Full=Inner membrane protein yebE;
InterProT9JI86 
PFAMT9JI86 
ProdomT9JI86 
UniProtKBT9V133SubName: Full=Inner membrane protein yebE;
InterProT9V133 
PFAMT9V133 
ProdomT9V133 
UniProtKBU0CR34SubName: Full=Inner membrane protein yebE;
InterProU0CR34 
PFAMU0CR34 
ProdomU0CR34 
UniProtKBU0D617SubName: Full=Inner membrane protein yebE;
InterProU0D617 
PFAMU0D617 
ProdomU0D617 
UniProtKBV1APL0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESD98838.1};
InterProV1APL0 
PFAMV1APL0 
ProdomV1APL0 
UniProtKBE9WX55SubName: Full=Inner membrane protein yebE;
InterProE9WX55 
PFAME9WX55 
ProdomE9WX55 
UniProtKBI2IA51SubName: Full=Uncharacterized protein;
InterProI2IA51 
PFAMI2IA51 
ProdomI2IA51 
UniProtKBS0ZNM0SubName: Full=Inner membrane protein yebE;
InterProS0ZNM0 
PFAMS0ZNM0 
ProdomS0ZNM0 
UniProtKBS1KUK6SubName: Full=Inner membrane protein yebE;
InterProS1KUK6 
PFAMS1KUK6 
ProdomS1KUK6 
UniProtKBG2BAB4SubName: Full=Putative uncharacterized protein;
InterProG2BAB4 
PFAMG2BAB4 
ProdomG2BAB4 
UniProtKBG2EXU9SubName: Full=Putative uncharacterized protein;
InterProG2EXU9 
PFAMG2EXU9 
ProdomG2EXU9 
UniProtKBS1AE46SubName: Full=Inner membrane protein yebE;
InterProS1AE46 
PFAMS1AE46 
ProdomS1AE46 
UniProtKBI2YN46SubName: Full=PF04391 family protein;
InterProI2YN46 
PFAMI2YN46 
ProdomI2YN46 
UniProtKBK3HTY4SubName: Full=Inner membrane protein yebE;
InterProK3HTY4 
PFAMK3HTY4 
ProdomK3HTY4 
UniProtKBL3QXN5SubName: Full=Inner membrane protein yebE;
InterProL3QXN5 
PFAML3QXN5 
ProdomL3QXN5 
UniProtKBN2F6D5SubName: Full=Inner membrane protein yebE;
InterProN2F6D5 
PFAMN2F6D5 
ProdomN2F6D5 
UniProtKBL3VSY6SubName: Full=Inner membrane protein yebE;
InterProL3VSY6 
PFAML3VSY6 
ProdomL3VSY6 
UniProtKBH4VWX2SubName: Full=Inner membrane protein yebE;
InterProH4VWX2 
PFAMH4VWX2 
ProdomH4VWX2 
UniProtKBS1EHB9SubName: Full=Inner membrane protein yebE;
InterProS1EHB9 
PFAMS1EHB9 
ProdomS1EHB9 
UniProtKBI4TBR4SubName: Full=Uncharacterized protein;
InterProI4TBR4 
PFAMI4TBR4 
ProdomI4TBR4 
UniProtKBM7UNN1SubName: Full=Uncharacterized protein;
InterProM7UNN1 
PFAMM7UNN1 
ProdomM7UNN1 
UniProtKBG0F6W4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEJ56885.1};
InterProG0F6W4 
PFAMG0F6W4 
ProdomG0F6W4 
UniProtKBT9NEQ7SubName: Full=Inner membrane protein yebE;
InterProT9NEQ7 
PFAMT9NEQ7 
ProdomT9NEQ7 
UniProtKBI2R2E8SubName: Full=Inner membrane protein yebE;
InterProI2R2E8 
PFAMI2R2E8 
ProdomI2R2E8 
UniProtKBK3H664SubName: Full=Inner membrane protein yebE;
InterProK3H664 
PFAMK3H664 
ProdomK3H664 
UniProtKBL3WZI7SubName: Full=Inner membrane protein yebE;
InterProL3WZI7 
PFAML3WZI7 
ProdomL3WZI7 
UniProtKBL4WH46SubName: Full=Inner membrane protein yebE;
InterProL4WH46 
PFAML4WH46 
ProdomL4WH46 
UniProtKBT9MG60SubName: Full=Inner membrane protein yebE;
InterProT9MG60 
PFAMT9MG60 
ProdomT9MG60 
UniProtKBH0QAD5SubName: Full=Conserved protein;
InterProH0QAD5 
PFAMH0QAD5 
ProdomH0QAD5 
UniProtKBH4VH54SubName: Full=Inner membrane protein yebE;
InterProH4VH54 
PFAMH4VH54 
ProdomH4VH54 
UniProtKBS0XYY8SubName: Full=Inner membrane protein yebE;
InterProS0XYY8 
PFAMS0XYY8 
ProdomS0XYY8 
UniProtKBA0A079F898SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:KDY52990.1};
InterProA0A079F898 
PFAMA0A079F898 
ProdomA0A079F898 
UniProtKBH4WC51SubName: Full=Uncharacterized protein;
InterProH4WC51 
PFAMH4WC51 
ProdomH4WC51 
UniProtKBI0ZSP3SubName: Full=Putative inner membrane protein;
InterProI0ZSP3 
PFAMI0ZSP3 
ProdomI0ZSP3 
UniProtKBI2P6S5SubName: Full=Inner membrane protein yebE;
InterProI2P6S5 
PFAMI2P6S5 
ProdomI2P6S5 
UniProtKBI2XE25SubName: Full=PF04391 family protein {ECO:0000313|EMBL:EII47245.1};
InterProI2XE25 
PFAMI2XE25 
ProdomI2XE25 
UniProtKBG2CKW7SubName: Full=Putative uncharacterized protein;
InterProG2CKW7 
PFAMG2CKW7 
ProdomG2CKW7 
UniProtKBT8ZYH3SubName: Full=Inner membrane protein yebE;
InterProT8ZYH3 
PFAMT8ZYH3 
ProdomT8ZYH3 
UniProtKBS1CXX2SubName: Full=Inner membrane protein yebE;
InterProS1CXX2 
PFAMS1CXX2 
ProdomS1CXX2 
UniProtKBG2AVW8SubName: Full=Putative uncharacterized protein;
InterProG2AVW8 
PFAMG2AVW8 
ProdomG2AVW8 
UniProtKBS0VGQ3SubName: Full=Inner membrane protein yebE {ECO:0000313|EMBL:EOU60662.1};
InterProS0VGQ3 
PFAMS0VGQ3 
ProdomS0VGQ3 
UniProtKBN2RJC8SubName: Full=Inner membrane protein yebE;
InterProN2RJC8 
PFAMN2RJC8 
ProdomN2RJC8 
UniProtKBP33218RecName: Full=Inner membrane protein YebE;
InterProP33218 
PFAMP33218 
ProdomP33218 
UniProtKBD8AVC0SubName: Full=Putative inner membrane protein;
InterProD8AVC0 
PFAMD8AVC0 
ProdomD8AVC0 
UniProtKBI2R2E8SubName: Full=Inner membrane protein yebE;
InterProI2R2E8 
PFAMI2R2E8 
ProdomI2R2E8 
UniProtKBD8B3K1SubName: Full=Putative inner membrane protein;
InterProD8B3K1 
PFAMD8B3K1 
ProdomD8B3K1 
UniProtKBI4TBR4SubName: Full=Uncharacterized protein;
InterProI4TBR4 
PFAMI4TBR4 
ProdomI4TBR4 
UniProtKBD8BYH2SubName: Full=Putative inner membrane protein;
InterProD8BYH2 
PFAMD8BYH2 
ProdomD8BYH2 
UniProtKBE1HMF5SubName: Full=Putative inner membrane protein;
InterProE1HMF5 
PFAME1HMF5 
ProdomE1HMF5 
UniProtKBE9WX55SubName: Full=Inner membrane protein yebE;
InterProE9WX55 
PFAME9WX55 
ProdomE9WX55 
UniProtKBI0ZSP3SubName: Full=Putative inner membrane protein;
InterProI0ZSP3 
PFAMI0ZSP3 
ProdomI0ZSP3 
UniProtKBH4VWX2SubName: Full=Inner membrane protein yebE;
InterProH4VWX2 
PFAMH4VWX2 
ProdomH4VWX2 
UniProtKBC9QT92SubName: Full=Putative uncharacterized protein yebE;Flags: Precursor;
InterProC9QT92 
PFAMC9QT92 
ProdomC9QT92 
UniProtKBA0A8F9I7C3SubName: Full=Tellurite resistance TerB family protein {ECO:0000313|EMBL:QYE41351.1}
InterProA0A8F9I7C3 
PFAMA0A8F9I7C3 
ProdomA0A8F9I7C3 
UniProtKBF4SL00SubName: Full=Inner membrane protein YebE;
InterProF4SL00 
PFAMF4SL00 
ProdomF4SL00 
UniProtKBI2YN46SubName: Full=PF04391 family protein;
InterProI2YN46 
PFAMI2YN46 
ProdomI2YN46 
UniProtKBI2IA51SubName: Full=Uncharacterized protein;
InterProI2IA51 
PFAMI2IA51 
ProdomI2IA51 
UniProtKBI2P6S5SubName: Full=Inner membrane protein yebE;
InterProI2P6S5 
PFAMI2P6S5 
ProdomI2P6S5 
UniProtKBB1XHB4SubName: Full=Conserved protein;
InterProB1XHB4 
PFAMB1XHB4 
ProdomB1XHB4 
UniProtKBI2XE25SubName: Full=PF04391 family protein;
InterProI2XE25 
PFAMI2XE25 
ProdomI2XE25 
UniProtKBC4ZZK3SubName: Full=Conserved protein;
InterProC4ZZK3 
PFAMC4ZZK3 
ProdomC4ZZK3