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Model Details Page

Sequence Information

Primary Database Link P37338
Original Database ID ref NP_417150.4
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation recname: full=hth-type transcriptional
repressor csir;altname: full=carbon
starv ation induced regulator;
Sequence Length 220

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-216
Protein Length220
Template PDB Code4p9fA
Template Region9-218
Sequence Identity22%
E-Value1.9e-8
GA3411
MPQS1.32302
z-DOPE-0.49
TSVMod MethodMSALL
TSVMod RMSD5.496
TSVMod NO350.67
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4p9f
DBALI4p9fA 
JenaImageLibrary4p9f 
Target Sequence
UniProtKBB7LE80SubName: Full=CsiR protein {ECO:0000313|EMBL:CAU98805.1};
InterProB7LE80 
PFAMB7LE80 
ProdomB7LE80 
UniProtKBA0A029KHP8SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:EZJ72555.1};
InterProA0A029KHP8 
PFAMA0A029KHP8 
ProdomA0A029KHP8 
UniProtKBA0A029M367SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:EZJ92123.1};
InterProA0A029M367 
PFAMA0A029M367 
ProdomA0A029M367 
UniProtKBA0A069WZN0SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDU23107.1};
InterProA0A069WZN0 
PFAMA0A069WZN0 
ProdomA0A069WZN0 
UniProtKBA0A069XHD7SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDU29106.1};
InterProA0A069XHD7 
PFAMA0A069XHD7 
ProdomA0A069XHD7 
UniProtKBA0A070CTR3SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KDV31690.1};
InterProA0A070CTR3 
PFAMA0A070CTR3 
ProdomA0A070CTR3 
UniProtKBA0A070FDY4SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KDV64090.1};
InterProA0A070FDY4 
PFAMA0A070FDY4 
ProdomA0A070FDY4 
UniProtKBA0A070TG58SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDX25003.1};
InterProA0A070TG58 
PFAMA0A070TG58 
ProdomA0A070TG58 
UniProtKBA0A070UWN1SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDX46350.1};
InterProA0A070UWN1 
PFAMA0A070UWN1 
ProdomA0A070UWN1 
UniProtKBA0A071AQP1SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDY63450.1};
InterProA0A071AQP1 
PFAMA0A071AQP1 
ProdomA0A071AQP1 
UniProtKBA0A071BVE8SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDY85402.1};
InterProA0A071BVE8 
PFAMA0A071BVE8 
ProdomA0A071BVE8 
UniProtKBA0A028BRB9SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE25916.1};
InterProA0A028BRB9 
PFAMA0A028BRB9 
ProdomA0A028BRB9 
UniProtKBA0A028A6D8SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE06405.1};
InterProA0A028A6D8 
PFAMA0A028A6D8 
ProdomA0A028A6D8 
UniProtKBA7ZQ95SubName: Full=Gab operon transcriptional repressor CsiR {ECO:0000313|EMBL:ABV18161.1};
InterProA7ZQ95 
PFAMA7ZQ95 
ProdomA7ZQ95 
UniProtKBB3XIQ8SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3XIQ8 
PFAMB3XIQ8 
ProdomB3XIQ8 
UniProtKBC6UC19SubName: Full=DNA-binding transcriptional dual regulator;
InterProC6UC19 
PFAMC6UC19 
ProdomC6UC19 
UniProtKBC6URJ9SubName: Full=DNA-binding transcriptional dual regulator;
InterProC6URJ9 
PFAMC6URJ9 
ProdomC6URJ9 
UniProtKBC8TW26SubName: Full=DNA-binding transcriptional dual regulator CsiR {ECO:0000313|EMBL:BAI26926.1};
InterProC8TW26 
PFAMC8TW26 
ProdomC8TW26 
UniProtKBC5W7Y0SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACT28121.1};
InterProC5W7Y0 
PFAMC5W7Y0 
ProdomC5W7Y0 
UniProtKBE0J5N5SubName: Full=DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:ADT76272.1};SubName: Full=DNA-binding transcriptional regulator CsiR {ECO:0000313|EMBL:AFH12453.1};
InterProE0J5N5 
PFAME0J5N5 
ProdomE0J5N5 
UniProtKBD3QPL5SubName: Full=DNA-binding transcriptional regulator CsiR {ECO:0000313|EMBL:ADD57829.1};
InterProD3QPL5 
PFAMD3QPL5 
ProdomD3QPL5 
UniProtKBE2JT58SubName: Full=Gab operon transcriptional repressor CsiR;
InterProE2JT58 
PFAME2JT58 
ProdomE2JT58 
UniProtKBC9R0X7SubName: Full=DNA-binding transcriptional regulator CsiR;SubName: Full=Transcriptional regulator, GntR family;
InterProC9R0X7 
PFAMC9R0X7 
ProdomC9R0X7 
UniProtKBB1LPD7SubName: Full=Gab operon transcriptional repressor CsiR {ECO:0000313|EMBL:ACB19156.1};
InterProB1LPD7 
PFAMB1LPD7 
ProdomB1LPD7 
UniProtKBA0A073FTQ5SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEJ45237.1};
InterProA0A073FTQ5 
PFAMA0A073FTQ5 
ProdomA0A073FTQ5 
UniProtKBA0A073GL03SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEJ59468.1};
InterProA0A073GL03 
PFAMA0A073GL03 
ProdomA0A073GL03 
UniProtKBA0A0G3K7E8SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:AKK49413.1};
InterProA0A0G3K7E8 
PFAMA0A0G3K7E8 
ProdomA0A0G3K7E8 
UniProtKBA0A0H4RX49SubName: Full=DNA-binding transcriptional regulator CsiR {ECO:0000313|EMBL:AKP85495.1};
InterProA0A0H4RX49 
PFAMA0A0H4RX49 
ProdomA0A0H4RX49 
UniProtKBA0A0I5A9K4SubName: Full=DNA-binding transcriptional regulator CsiR {ECO:0000313|EMBL:CTB92172.1};
InterProA0A0I5A9K4 
PFAMA0A0I5A9K4 
ProdomA0A0I5A9K4 
UniProtKBA8A3E5SubName: Full=Gab operon transcriptional repressor CsiR;
InterProA8A3E5 
PFAMA8A3E5 
ProdomA8A3E5 
UniProtKBB2PF40SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB2PF40 
PFAMB2PF40 
ProdomB2PF40 
UniProtKBB2NRP3SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB2NRP3 
PFAMB2NRP3 
ProdomB2NRP3 
UniProtKBB3IBN0SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3IBN0 
PFAMB3IBN0 
ProdomB3IBN0 
UniProtKBB3HDL3SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3HDL3 
PFAMB3HDL3 
ProdomB3HDL3 
UniProtKBB3WLT8SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3WLT8 
PFAMB3WLT8 
ProdomB3WLT8 
UniProtKBB6I655SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:BAG78441.1};
InterProB6I655 
PFAMB6I655 
ProdomB6I655 
UniProtKBA0A0G3HYX3SubName: Full=DNA-binding transcriptional repressor of csiD protein {ECO:0000313|EMBL:AKK18529.1};
InterProA0A0G3HYX3 
PFAMA0A0G3HYX3 
ProdomA0A0G3HYX3 
UniProtKBA0A0E3KP75SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:AKA91722.1};
InterProA0A0E3KP75 
PFAMA0A0E3KP75 
ProdomA0A0E3KP75 
UniProtKBA0A0E2U4Z2SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE24688.1};
InterProA0A0E2U4Z2 
PFAMA0A0E2U4Z2 
ProdomA0A0E2U4Z2 
UniProtKBA0A073TAH5SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEL23075.1};
InterProA0A073TAH5 
PFAMA0A073TAH5 
ProdomA0A073TAH5 
UniProtKBA0A073VRZ8SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEL82896.1};
InterProA0A073VRZ8 
PFAMA0A073VRZ8 
ProdomA0A073VRZ8 
UniProtKBA0A079FA53SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDY51316.1};
InterProA0A079FA53 
PFAMA0A079FA53 
ProdomA0A079FA53 
UniProtKBA0A079FXC0SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDY66935.1};
InterProA0A079FXC0 
PFAMA0A079FXC0 
ProdomA0A079FXC0 
UniProtKBA0A080EJ76SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEN47166.1};
InterProA0A080EJ76 
PFAMA0A080EJ76 
ProdomA0A080EJ76 
UniProtKBA0A080F3X7SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEN54829.1};
InterProA0A080F3X7 
PFAMA0A080F3X7 
ProdomA0A080F3X7 
UniProtKBA0A080I461SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEO22715.1};
InterProA0A080I461 
PFAMA0A080I461 
ProdomA0A080I461 
UniProtKBA0A0A0FJM0SubName: Full=Putative HTH-type transcriptional regulator YgaE {ECO:0000313|EMBL:KGM62710.1};
InterProA0A0A0FJM0 
PFAMA0A0A0FJM0 
ProdomA0A0A0FJM0 
UniProtKBA0A0E0U228SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE57880.1};
InterProA0A0E0U228 
PFAMA0A0E0U228 
ProdomA0A0E0U228 
UniProtKBA0A0E0XX53SubName: Full=DNA-binding transcriptional regulator CsiR {ECO:0000313|EMBL:AFS73157.1};
InterProA0A0E0XX53 
PFAMA0A0E0XX53 
ProdomA0A0E0XX53 
UniProtKBB6ZWF7SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB6ZWF7 
PFAMB6ZWF7 
ProdomB6ZWF7 
UniProtKBB5Z276SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB5Z276 
PFAMB5Z276 
ProdomB5Z276 
UniProtKBA0A017JSR4SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:EYE01654.1};
InterProA0A017JSR4 
PFAMA0A017JSR4 
ProdomA0A017JSR4 
UniProtKBE2K793SubName: Full=Gab operon transcriptional repressor CsiR;
InterProE2K793 
PFAME2K793 
ProdomE2K793 
UniProtKBA0A026VB08SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZA38385.1};
InterProA0A026VB08 
PFAMA0A026VB08 
ProdomA0A026VB08 
UniProtKBA0A029PDZ7SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:EZK20586.1};
InterProA0A029PDZ7 
PFAMA0A029PDZ7 
ProdomA0A029PDZ7 
UniProtKBA0A070PDC4SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDW78887.1};
InterProA0A070PDC4 
PFAMA0A070PDC4 
ProdomA0A070PDC4 
UniProtKBA0A071C9L6SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDZ13745.1};
InterProA0A071C9L6 
PFAMA0A071C9L6 
ProdomA0A071C9L6 
UniProtKBA0A074J055SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEO08656.1};
InterProA0A074J055 
PFAMA0A074J055 
ProdomA0A074J055 
UniProtKBA0A080FR55SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEN66049.1};
InterProA0A080FR55 
PFAMA0A080FR55 
ProdomA0A080FR55 
UniProtKBA0A0E1ST59SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDU62096.1};
InterProA0A0E1ST59 
PFAMA0A0E1ST59 
ProdomA0A0E1ST59 
UniProtKBA0A0H3PMM7SubName: Full=Gab operon transcriptional repressor CsiR {ECO:0000313|EMBL:EDU89284.1};
InterProA0A0H3PMM7 
PFAMA0A0H3PMM7 
ProdomA0A0H3PMM7 
UniProtKBB3BN51SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3BN51 
PFAMB3BN51 
ProdomB3BN51 
UniProtKBC8U997SubName: Full=DNA-binding transcriptional dual regulator CsiR {ECO:0000313|EMBL:BAI31956.1};
InterProC8U997 
PFAMC8U997 
ProdomC8U997 
UniProtKBB7LVS4SubName: Full=DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:CAQ87969.1};
InterProB7LVS4 
PFAMB7LVS4 
ProdomB7LVS4 
UniProtKBB3B3W1SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3B3W1 
PFAMB3B3W1 
ProdomB3B3W1 
UniProtKBA0A024KPQ4SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:CDP66890.1};
InterProA0A024KPQ4 
PFAMA0A024KPQ4 
ProdomA0A024KPQ4 
UniProtKBB3A6Q5SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3A6Q5 
PFAMB3A6Q5 
ProdomB3A6Q5 
UniProtKBA0A025GLE5SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV65068.1};
InterProA0A025GLE5 
PFAMA0A025GLE5 
ProdomA0A025GLE5 
UniProtKBA0A074HQ97SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEN96458.1};
InterProA0A074HQ97 
PFAMA0A074HQ97 
ProdomA0A074HQ97 
UniProtKBB2P9Q6SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB2P9Q6 
PFAMB2P9Q6 
ProdomB2P9Q6 
UniProtKBC6EJW1SubName: Full=Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACT28121.1};
InterProC6EJW1 
PFAMC6EJW1 
ProdomC6EJW1 
UniProtKBA0A026HCE7SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYY80725.1};
InterProA0A026HCE7 
PFAMA0A026HCE7 
ProdomA0A026HCE7 
UniProtKBA0A070NZU0SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDW74142.1};
InterProA0A070NZU0 
PFAMA0A070NZU0 
ProdomA0A070NZU0 
UniProtKBA0A074HVG8SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEN98501.1};
InterProA0A074HVG8 
PFAMA0A074HVG8 
ProdomA0A074HVG8 
UniProtKBA0A0E1M0B8SubName: Full=Transcriptional repressor of csiD {ECO:0000313|EMBL:AJF57481.1};
InterProA0A0E1M0B8 
PFAMA0A0E1M0B8 
ProdomA0A0E1M0B8 
UniProtKBB3BZC4SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3BZC4 
PFAMB3BZC4 
ProdomB3BZC4 
UniProtKBB7N6P8SubName: Full=DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:CAR14159.1};
InterProB7N6P8 
PFAMB7N6P8 
ProdomB7N6P8 
UniProtKBA0A079DCA7SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDY20470.1};
InterProA0A079DCA7 
PFAMA0A079DCA7 
ProdomA0A079DCA7 
UniProtKBA0A079H757SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDY96904.1};
InterProA0A079H757 
PFAMA0A079H757 
ProdomA0A079H757 
UniProtKBA0A080GKZ0SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEN88955.1};
InterProA0A080GKZ0 
PFAMA0A080GKZ0 
ProdomA0A080GKZ0 
UniProtKBA0A0A8UI67SubName: Full=DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:CEK06453.1};
InterProA0A0A8UI67 
PFAMA0A0A8UI67 
ProdomA0A0A8UI67 
UniProtKBA0A0E2TYC8SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYV03893.1};
InterProA0A0E2TYC8 
PFAMA0A0E2TYC8 
ProdomA0A0E2TYC8 
UniProtKBA0A0F6C7Y7SubName: Full=DNA-binding transcriptional regulator CsiR {ECO:0000313|EMBL:AFJ30343.1};
InterProA0A0F6C7Y7 
PFAMA0A0F6C7Y7 
ProdomA0A0F6C7Y7 
UniProtKBA0A0H3X868SubName: Full=DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:AKM36192.1};
InterProA0A0H3X868 
PFAMA0A0H3X868 
ProdomA0A0H3X868 
UniProtKBB1IV09SubName: Full=Transcriptional regulator, GntR family;
InterProB1IV09 
PFAMB1IV09 
ProdomB1IV09 
UniProtKBB3AND5SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3AND5 
PFAMB3AND5 
ProdomB3AND5 
UniProtKBB3IQP6SubName: Full=Gab operon transcriptional repressor CsiR;
InterProB3IQP6 
PFAMB3IQP6 
ProdomB3IQP6 
UniProtKBA0A073H1H3SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KEJ67277.1};
InterProA0A073H1H3 
PFAMA0A073H1H3 
ProdomA0A073H1H3 
UniProtKBA0A071D485SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDZ35887.1};
InterProA0A071D485 
PFAMA0A071D485 
ProdomA0A071D485 
UniProtKBA0A070Y0T1SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDX84064.1};
InterProA0A070Y0T1 
PFAMA0A070Y0T1 
ProdomA0A070Y0T1 
UniProtKBB1XBW9SubName: Full=DNA-binding transcriptional dual regulator;
InterProB1XBW9 
PFAMB1XBW9 
ProdomB1XBW9 
UniProtKBC8UEM2SubName: Full=DNA-binding transcriptional dual regulator CsiR {ECO:0000313|EMBL:BAI37194.1};
InterProC8UEM2 
PFAMC8UEM2 
ProdomC8UEM2 
UniProtKBD8BZV8SubName: Full=FCD domain protein {ECO:0000313|EMBL:EFI87793.1};
InterProD8BZV8 
PFAMD8BZV8 
ProdomD8BZV8 
UniProtKBC4ZYR6SubName: Full=DNA-binding transcriptional dual regulator;
InterProC4ZYR6 
PFAMC4ZYR6 
ProdomC4ZYR6 
UniProtKBA0A027YZT1SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZD92216.1};
InterProA0A027YZT1 
PFAMA0A027YZT1 
ProdomA0A027YZT1 
UniProtKBA0A028ECT1SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EZE57680.1};
InterProA0A028ECT1 
PFAMA0A028ECT1 
ProdomA0A028ECT1 
UniProtKBA0A064TBS1SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDG93358.1};
InterProA0A064TBS1 
PFAMA0A064TBS1 
ProdomA0A064TBS1 
UniProtKBA0A069YRF1SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDU49659.1};
InterProA0A069YRF1 
PFAMA0A069YRF1 
ProdomA0A069YRF1 
UniProtKBA0A070SRN1SubName: Full=HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:KDX20632.1};
InterProA0A070SRN1 
PFAMA0A070SRN1 
ProdomA0A070SRN1 
UniProtKBB2N1L3SubName: Full=Transcriptional regulator, GntR family;
InterProB2N1L3 
PFAMB2N1L3 
ProdomB2N1L3