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Sequence Information

Primary Database Link P39376
Original Database ID ref NP_418747.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=hth-type transcriptional
regulator yjie;altname: full=hypochlorite
-response regulator protein yjie;altname:
full=quorum-sensing regulat ...
Sequence Length 303

Dataset Information:

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Model Information

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Target Region11-298
Protein Length303
Template PDB Code3k1mA
Template Region1-292
Sequence Identity21%
E-Value0
GA3411
MPQS1.217
z-DOPE-0.04
TSVMod MethodMSALL
TSVMod RMSD5.651
TSVMod NO350.616
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3k1m
DBALI3k1mA 
JenaImageLibrary3k1m 
Target Sequence
UniProtKBB7NGY4SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR16047.1};
InterProB7NGY4 
PFAMB7NGY4 
ProdomB7NGY4 
UniProtKBA0A079Y419SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KEJ53319.1};
InterProA0A079Y419 
PFAMA0A079Y419 
ProdomA0A079Y419 
UniProtKBA0A080GJ19SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KEN84385.1};
InterProA0A080GJ19 
PFAMA0A080GJ19 
ProdomA0A080GJ19 
UniProtKBA0A0E0U7D4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE59716.1};
InterProA0A0E0U7D4 
PFAMA0A0E0U7D4 
ProdomA0A0E0U7D4 
UniProtKBA0A0E0VDW6SubName: Full=Cell density-dependent motility repressor {ECO:0000313|EMBL:AEQ15734.1};
InterProA0A0E0VDW6 
PFAMA0A0E0VDW6 
ProdomA0A0E0VDW6 
UniProtKBA0A0E2TPK7SubName: Full=Cell density-dependent motility repressor {ECO:0000313|EMBL:EYV08550.1};
InterProA0A0E2TPK7 
PFAMA0A0E2TPK7 
ProdomA0A0E2TPK7 
UniProtKBA0A0E2U2X0SubName: Full=Cell density-dependent motility repressor {ECO:0000313|EMBL:EZE22323.1};
InterProA0A0E2U2X0 
PFAMA0A0E2U2X0 
ProdomA0A0E2U2X0 
UniProtKBE1HQM2SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK89774.1};
InterProE1HQM2 
PFAME1HQM2 
ProdomE1HQM2 
UniProtKBE7JCF9SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProE7JCF9 
PFAME7JCF9 
ProdomE7JCF9 
UniProtKBE6BIY3SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFU35791.1};
InterProE6BIY3 
PFAME6BIY3 
ProdomE6BIY3 
UniProtKBE9VCL7SubName: Full=LysR substrate binding domain-containing protein;
InterProE9VCL7 
PFAME9VCL7 
ProdomE9VCL7 
UniProtKBA0A074HI00SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KEN93642.1};
InterProA0A074HI00 
PFAMA0A074HI00 
ProdomA0A074HI00 
UniProtKBA0A073W555SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KEL87451.1};
InterProA0A073W555 
PFAMA0A073W555 
ProdomA0A073W555 
UniProtKBD6IJG8SubName: Full=DNA-binding transcriptional regulator;
InterProD6IJG8 
PFAMD6IJG8 
ProdomD6IJG8 
UniProtKBI2T3L0SubName: Full=LysR substrate binding domain protein;
InterProI2T3L0 
PFAMI2T3L0 
ProdomI2T3L0 
UniProtKBI2W960SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EII21188.1};
InterProI2W960 
PFAMI2W960 
ProdomI2W960 
UniProtKBI2WT33SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EII33908.1};
InterProI2WT33 
PFAMI2WT33 
ProdomI2WT33 
UniProtKBI2X8G0SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EII45280.1};
InterProI2X8G0 
PFAMI2X8G0 
ProdomI2X8G0 
UniProtKBC6EBQ2SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACT30697.1};
InterProC6EBQ2 
PFAMC6EBQ2 
ProdomC6EBQ2 
UniProtKBC6UL98SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6UL98 
PFAMC6UL98 
ProdomC6UL98 
UniProtKBI4NGC2SubName: Full=Cell density-dependent motility repressor;
InterProI4NGC2 
PFAMI4NGC2 
ProdomI4NGC2 
UniProtKBC9QSY9SubName: Full=DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, LysR family;
InterProC9QSY9 
PFAMC9QSY9 
ProdomC9QSY9 
UniProtKBI2YGY6SubName: Full=LysR substrate binding domain protein;
InterProI2YGY6 
PFAMI2YGY6 
ProdomI2YGY6 
UniProtKBH5R3L3SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5R3L3 
PFAMH5R3L3 
ProdomH5R3L3 
UniProtKBE1J9X0SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK67391.1};
InterProE1J9X0 
PFAME1J9X0 
ProdomE1J9X0 
UniProtKBE0J7G4SubName: Full=Cell density-dependent motility repressor {ECO:0000313|EMBL:AFH14200.1};SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:ADT77957.1};
InterProE0J7G4 
PFAME0J7G4 
ProdomE0J7G4 
UniProtKBH5Q864SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5Q864 
PFAMH5Q864 
ProdomH5Q864 
UniProtKBH5H0Y0SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5H0Y0 
PFAMH5H0Y0 
ProdomH5H0Y0 
UniProtKBH4WJ94SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH4WJ94 
PFAMH4WJ94 
ProdomH4WJ94 
UniProtKBD7XQJ1SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFJ86329.1};
InterProD7XQJ1 
PFAMD7XQJ1 
ProdomD7XQJ1 
UniProtKBI0ZML1SubName: Full=Transcriptional regulator, LysR family;
InterProI0ZML1 
PFAMI0ZML1 
ProdomI0ZML1 
UniProtKBD7X9Q2SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFJ72981.1};
InterProD7X9Q2 
PFAMD7X9Q2 
ProdomD7X9Q2 
UniProtKBI2SLF3SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EIH21624.1};
InterProI2SLF3 
PFAMI2SLF3 
ProdomI2SLF3 
UniProtKBI2SE58SubName: Full=LysR substrate binding domain protein;
InterProI2SE58 
PFAMI2SE58 
ProdomI2SE58 
UniProtKBB2N141SubName: Full=Transcriptional regulator, LysR family;
InterProB2N141 
PFAMB2N141 
ProdomB2N141 
UniProtKBI2U612SubName: Full=LysR substrate binding domain protein;
InterProI2U612 
PFAMI2U612 
ProdomI2U612 
UniProtKBH5HGH3SubName: Full=HTH-type transcriptional regulator QseD;
InterProH5HGH3 
PFAMH5HGH3 
ProdomH5HGH3 
UniProtKBH5HY96SubName: Full=HTH-type transcriptional regulator QseD;
InterProH5HY96 
PFAMH5HY96 
ProdomH5HY96 
UniProtKBH5BJQ5SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5BJQ5 
PFAMH5BJQ5 
ProdomH5BJQ5 
UniProtKBF4T982SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGI23305.1};
InterProF4T982 
PFAMF4T982 
ProdomF4T982 
UniProtKBF4VMU3SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGI43231.1};
InterProF4VMU3 
PFAMF4VMU3 
ProdomF4VMU3 
UniProtKBF3WRY7SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:EGI88532.1};
InterProF3WRY7 
PFAMF3WRY7 
ProdomF3WRY7 
UniProtKBG2BYF7SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProG2BYF7 
PFAMG2BYF7 
ProdomG2BYF7 
UniProtKBG2A885SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProG2A885 
PFAMG2A885 
ProdomG2A885 
UniProtKBG4PS91SubName: Full=Cell density-dependent motility repressor;
InterProG4PS91 
PFAMG4PS91 
ProdomG4PS91 
UniProtKBG1ZT45SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProG1ZT45 
PFAMG1ZT45 
ProdomG1ZT45 
UniProtKBE9X9C6SubName: Full=LysR substrate binding domain-containing protein;
InterProE9X9C6 
PFAME9X9C6 
ProdomE9X9C6 
UniProtKBH5CW56SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5CW56 
PFAMH5CW56 
ProdomH5CW56 
UniProtKBH5C093SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5C093 
PFAMH5C093 
ProdomH5C093 
UniProtKBB6I2K8SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:BAG80125.1};
InterProB6I2K8 
PFAMB6I2K8 
ProdomB6I2K8 
UniProtKBI2TMV1SubName: Full=LysR substrate binding domain protein;
InterProI2TMV1 
PFAMI2TMV1 
ProdomI2TMV1 
UniProtKBA0A024KMM3SubName: Full=Cell density-dependent motility repressor {ECO:0000313|EMBL:CDP65304.1};
InterProA0A024KMM3 
PFAMA0A024KMM3 
ProdomA0A024KMM3 
UniProtKBC8U0S5SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI33787.1};
InterProC8U0S5 
PFAMC8U0S5 
ProdomC8U0S5 
UniProtKBA0A070US10SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KDX44299.1};
InterProA0A070US10 
PFAMA0A070US10 
ProdomA0A070US10 
UniProtKBA0A0A0F5A8SubName: Full=Putative HTH-type transcriptional regulator YjiE {ECO:0000313|EMBL:KGM58301.1};
InterProA0A0A0F5A8 
PFAMA0A0A0F5A8 
ProdomA0A0A0F5A8 
UniProtKBA0A0G3HS94SubName: Full=Hypochlorite-responsive transcription factor protein {ECO:0000313|EMBL:AKK14042.1};
InterProA0A0G3HS94 
PFAMA0A0G3HS94 
ProdomA0A0G3HS94 
UniProtKBE9W1X1SubName: Full=LysR substrate binding domain-containing protein;
InterProE9W1X1 
PFAME9W1X1 
ProdomE9W1X1 
UniProtKBG1YI20SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProG1YI20 
PFAMG1YI20 
ProdomG1YI20 
UniProtKBH4W5C8SubName: Full=HTH-type transcriptional regulator QseD;
InterProH4W5C8 
PFAMH4W5C8 
ProdomH4W5C8 
UniProtKBH5GJY5SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5GJY5 
PFAMH5GJY5 
ProdomH5GJY5 
UniProtKBH5QNC3SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5QNC3 
PFAMH5QNC3 
ProdomH5QNC3 
UniProtKBI2P805SubName: Full=HTH-type transcriptional regulator QseD;
InterProI2P805 
PFAMI2P805 
ProdomI2P805 
UniProtKBI2XKW0SubName: Full=LysR substrate binding domain protein;
InterProI2XKW0 
PFAMI2XKW0 
ProdomI2XKW0 
UniProtKBB7LXN6SubName: Full=Putative DNA-binding transcriptional regulator;
InterProB7LXN6 
PFAMB7LXN6 
ProdomB7LXN6 
UniProtKBI2I0S8SubName: Full=Cell density-dependent motility repressor;
InterProI2I0S8 
PFAMI2I0S8 
ProdomI2I0S8 
UniProtKBA0A024L943SubName: Full=Cell density-dependent motility repressor {ECO:0000313|EMBL:CDP73334.1};SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:CEE04088.1};SubName: Full=HTH-type transcr
InterProA0A024L943 
PFAMA0A024L943 
ProdomA0A024L943 
UniProtKBI1BGC4SubName: Full=Transcriptional regulator, LysR family;
InterProI1BGC4 
PFAMI1BGC4 
ProdomI1BGC4 
UniProtKBA0A069XJV1SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KDU27768.1};
InterProA0A069XJV1 
PFAMA0A069XJV1 
ProdomA0A069XJV1 
UniProtKBF4M2E9SubName: Full=Putative uncharacterized protein;
InterProF4M2E9 
PFAMF4M2E9 
ProdomF4M2E9 
UniProtKBH5R3V8SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5R3V8 
PFAMH5R3V8 
ProdomH5R3V8 
UniProtKBC4ZT15SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZT15 
PFAMC4ZT15 
ProdomC4ZT15 
UniProtKBA0A070F8P6SubName: Full=Cell density-dependent motility repressor {ECO:0000313|EMBL:KDV62120.1};
InterProA0A070F8P6 
PFAMA0A070F8P6 
ProdomA0A070F8P6 
UniProtKBA0A0E3H4N4SubName: Full=Quorum sensing regulator protein D {ECO:0000313|EMBL:AKA93471.1};
InterProA0A0E3H4N4 
PFAMA0A0E3H4N4 
ProdomA0A0E3H4N4 
UniProtKBG0F9Y9SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:AEJ59821.1};
InterProG0F9Y9 
PFAMG0F9Y9 
ProdomG0F9Y9 
UniProtKBH5FPE7SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5FPE7 
PFAMH5FPE7 
ProdomH5FPE7 
UniProtKBI2PVK2SubName: Full=HTH-type transcriptional regulator QseD;
InterProI2PVK2 
PFAMI2PVK2 
ProdomI2PVK2 
UniProtKBI2VUF9SubName: Full=LysR substrate binding domain protein;
InterProI2VUF9 
PFAMI2VUF9 
ProdomI2VUF9 
UniProtKBF9R0B6SubName: Full=Cell density-dependent motility repressor;
InterProF9R0B6 
PFAMF9R0B6 
ProdomF9R0B6 
UniProtKBG2CEJ9SubName: Full=Bacterial regulatory helix-turn-helix protein, lysR family protein;
InterProG2CEJ9 
PFAMG2CEJ9 
ProdomG2CEJ9 
UniProtKBG2F596SubName: Full=Cell density-dependent motility repressor;
InterProG2F596 
PFAMG2F596 
ProdomG2F596 
UniProtKBH5CF98SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5CF98 
PFAMH5CF98 
ProdomH5CF98 
UniProtKBH5DCM4SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5DCM4 
PFAMH5DCM4 
ProdomH5DCM4 
UniProtKBH5ICK1SubName: Full=HTH-type transcriptional regulator QseD;
InterProH5ICK1 
PFAMH5ICK1 
ProdomH5ICK1 
UniProtKBH5PTT0SubName: Full=Putative transcriptional regulator LYSR-type;
InterProH5PTT0 
PFAMH5PTT0 
ProdomH5PTT0 
UniProtKBE9WKJ7SubName: Full=LysR substrate binding domain-containing protein;
InterProE9WKJ7 
PFAME9WKJ7 
ProdomE9WKJ7 
UniProtKBA8A854SubName: Full=Transcriptional regulator, LysR family;
InterProA8A854 
PFAMA8A854 
ProdomA8A854 
UniProtKBB1IS98SubName: Full=Transcriptional regulator, LysR family;
InterProB1IS98 
PFAMB1IS98 
ProdomB1IS98 
UniProtKBD8EAU4SubName: Full=LysR substrate binding domain protein {ECO:0000313|EMBL:EFK44755.1};
InterProD8EAU4 
PFAMD8EAU4 
ProdomD8EAU4 
UniProtKBE8Y284SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADX52558.1};
InterProE8Y284 
PFAME8Y284 
ProdomE8Y284 
UniProtKBE7UJB3SubName: Full=Putative transcriptional regulator LYSR-type;
InterProE7UJB3 
PFAME7UJB3 
ProdomE7UJB3 
UniProtKBB7NV98SubName: Full=Putative DNA-binding transcriptional regulator;
InterProB7NV98 
PFAMB7NV98 
ProdomB7NV98 
UniProtKBC5W617SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACT30697.1};
InterProC5W617 
PFAMC5W617 
ProdomC5W617 
UniProtKBI4TLU0SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI4TLU0 
PFAMI4TLU0 
ProdomI4TLU0 
UniProtKBD6I4H4SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:EFE60485.2};
InterProD6I4H4 
PFAMD6I4H4 
ProdomD6I4H4 
UniProtKBA0A070Y313SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KDX84844.1};
InterProA0A070Y313 
PFAMA0A070Y313 
ProdomA0A070Y313 
UniProtKBA0A074IQK4SubName: Full=HTH-type transcriptional regulator QseD {ECO:0000313|EMBL:KEO17109.1};
InterProA0A074IQK4 
PFAMA0A074IQK4 
ProdomA0A074IQK4 
UniProtKBA0A0A8UP86SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEK08531.1};
InterProA0A0A8UP86 
PFAMA0A0A8UP86 
ProdomA0A0A8UP86 
UniProtKBA0A0E1SWZ5SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDU63466.1};
InterProA0A0E1SWZ5 
PFAMA0A0E1SWZ5 
ProdomA0A0E1SWZ5 
UniProtKBA0A0H3MNT3SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR20898.1};
InterProA0A0H3MNT3 
PFAMA0A0H3MNT3 
ProdomA0A0H3MNT3 
UniProtKBB3I589SubName: Full=Transcriptional regulator, LysR family;
InterProB3I589 
PFAMB3I589 
ProdomB3I589