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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P39385
Original Database ID ref NP_418756.1
Organism Escherichia coli, Shigella sp., etc.
Annotation recname: full=uncharacterized
protein yjin;
Sequence Length 426

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region193-320
Protein Length426
Template PDB Code2vlaA
Template Region142-266
Sequence Identity29%
E-Value0.95
GA3410.26
MPQS0.316169
z-DOPE0.91
TSVMod MethodMTALL
TSVMod RMSD18.415
TSVMod NO350.013
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2vlacrystal structure of restriction endonuclease bpuji recognition domain in complex with cognate dna
DBALI2vlaA 
JenaImageLibrary2vla 
Target Sequence
UniProtKBN4N439SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENG96487.1};
InterProN4N439 
PFAMN4N439 
ProdomN4N439 
UniProtKBA0A070YCV6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX84833.1};
InterProA0A070YCV6 
PFAMA0A070YCV6 
ProdomA0A070YCV6 
UniProtKBA0A074HGG3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN93653.1};
InterProA0A074HGG3 
PFAMA0A074HGG3 
ProdomA0A074HGG3 
UniProtKBA0A080EJJ1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN49332.1};
InterProA0A080EJJ1 
PFAMA0A080EJJ1 
ProdomA0A080EJJ1 
UniProtKBA0A080EJN6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN41200.1};
InterProA0A080EJN6 
PFAMA0A080EJN6 
ProdomA0A080EJN6 
UniProtKBA0A0E3H4N2SubName: Full=Uncharacterized protein YjiN {ECO:0000313|EMBL:AKA93461.1};
InterProA0A0E3H4N2 
PFAMA0A0E3H4N2 
ProdomA0A0E3H4N2 
UniProtKBA0A0G3HWP4SubName: Full=Zinc-type alcohol dehydrogenase-like protein {ECO:0000313|EMBL:AKK16363.1};
InterProA0A0G3HWP4 
PFAMA0A0G3HWP4 
ProdomA0A0G3HWP4 
UniProtKBT6ZVK0SubName: Full=Inner membrane protein;
InterProT6ZVK0 
PFAMT6ZVK0 
ProdomT6ZVK0 
UniProtKBT6ZZN9SubName: Full=Inner membrane protein;
InterProT6ZZN9 
PFAMT6ZZN9 
ProdomT6ZZN9 
UniProtKBT7CFY3SubName: Full=Inner membrane protein;
InterProT7CFY3 
PFAMT7CFY3 
ProdomT7CFY3 
UniProtKBT7EMB0SubName: Full=Inner membrane protein;
InterProT7EMB0 
PFAMT7EMB0 
ProdomT7EMB0 
UniProtKBA0A024L949SubName: Full=Conserved inner membrane protein {ECO:0000313|EMBL:CDP73344.1};SubName: Full=Inner membrane protein {ECO:0000313|EMBL:KLX90593.1};SubName: Full=Inner membrane protein YjiN {ECO:0000313|E
InterProA0A024L949 
PFAMA0A024L949 
ProdomA0A024L949 
UniProtKBA0A024KML7SubName: Full=Conserved inner membrane protein {ECO:0000313|EMBL:CDP65294.1};
InterProA0A024KML7 
PFAMA0A024KML7 
ProdomA0A024KML7 
UniProtKBT6BEG5SubName: Full=Inner membrane protein;
InterProT6BEG5 
PFAMT6BEG5 
ProdomT6BEG5 
UniProtKBT6R2W9SubName: Full=Inner membrane protein;
InterProT6R2W9 
PFAMT6R2W9 
ProdomT6R2W9 
UniProtKBP39385RecName: Full=Uncharacterized protein YjiN;
InterProP39385 
PFAMP39385 
ProdomP39385 
UniProtKBT6RQ17SubName: Full=Inner membrane protein;
InterProT6RQ17 
PFAMT6RQ17 
ProdomT6RQ17 
UniProtKBS1BGA6SubName: Full=Inner membrane protein;
InterProS1BGA6 
PFAMS1BGA6 
ProdomS1BGA6 
UniProtKBS1CLY5SubName: Full=Inner membrane protein;
InterProS1CLY5 
PFAMS1CLY5 
ProdomS1CLY5 
UniProtKBS1L8Z2SubName: Full=Inner membrane protein;
InterProS1L8Z2 
PFAMS1L8Z2 
ProdomS1L8Z2 
UniProtKBS1M2V0SubName: Full=Inner membrane protein;
InterProS1M2V0 
PFAMS1M2V0 
ProdomS1M2V0 
UniProtKBS1QKQ5SubName: Full=Inner membrane protein;
InterProS1QKQ5 
PFAMS1QKQ5 
ProdomS1QKQ5 
UniProtKBT5PYK8SubName: Full=Inner membrane protein;
InterProT5PYK8 
PFAMT5PYK8 
ProdomT5PYK8 
UniProtKBT5V610SubName: Full=Inner membrane protein;
InterProT5V610 
PFAMT5V610 
ProdomT5V610 
UniProtKBT7GR92SubName: Full=Inner membrane protein;
InterProT7GR92 
PFAMT7GR92 
ProdomT7GR92 
UniProtKBT7ICE0SubName: Full=Inner membrane protein;
InterProT7ICE0 
PFAMT7ICE0 
ProdomT7ICE0 
UniProtKBT6EJN0SubName: Full=Inner membrane protein;
InterProT6EJN0 
PFAMT6EJN0 
ProdomT6EJN0 
UniProtKBT8DYI4SubName: Full=Inner membrane protein;
InterProT8DYI4 
PFAMT8DYI4 
ProdomT8DYI4 
UniProtKBB7NGZ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR16058.1};
InterProB7NGZ4 
PFAMB7NGZ4 
ProdomB7NGZ4 
UniProtKBT8FTI3SubName: Full=Inner membrane protein;
InterProT8FTI3 
PFAMT8FTI3 
ProdomT8FTI3 
UniProtKBT8I103SubName: Full=Inner membrane protein;
InterProT8I103 
PFAMT8I103 
ProdomT8I103 
UniProtKBC4ZT24SubName: Full=Conserved inner membrane protein;
InterProC4ZT24 
PFAMC4ZT24 
ProdomC4ZT24 
UniProtKBT8J0A6SubName: Full=Inner membrane protein;
InterProT8J0A6 
PFAMT8J0A6 
ProdomT8J0A6 
UniProtKBC5W626SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT30687.1};
InterProC5W626 
PFAMC5W626 
ProdomC5W626 
UniProtKBT8K991SubName: Full=Inner membrane protein;
InterProT8K991 
PFAMT8K991 
ProdomT8K991 
UniProtKBC6EBP2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT30687.1};
InterProC6EBP2 
PFAMC6EBP2 
ProdomC6EBP2 
UniProtKBT6XAF1SubName: Full=Inner membrane protein;
InterProT6XAF1 
PFAMT6XAF1 
ProdomT6XAF1 
UniProtKBE1HQN3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK89785.1};
InterProE1HQN3 
PFAME1HQN3 
ProdomE1HQN3 
UniProtKBT7UE55SubName: Full=Inner membrane protein;
InterProT7UE55 
PFAMT7UE55 
ProdomT7UE55 
UniProtKBT7JCJ3SubName: Full=Inner membrane protein;
InterProT7JCJ3 
PFAMT7JCJ3 
ProdomT7JCJ3 
UniProtKBT7L869SubName: Full=Inner membrane protein;
InterProT7L869 
PFAMT7L869 
ProdomT7L869 
UniProtKBT7NC91SubName: Full=Inner membrane protein;
InterProT7NC91 
PFAMT7NC91 
ProdomT7NC91 
UniProtKBT7R6U5SubName: Full=Inner membrane protein;
InterProT7R6U5 
PFAMT7R6U5 
ProdomT7R6U5 
UniProtKBT7XJJ0SubName: Full=Inner membrane protein;
InterProT7XJJ0 
PFAMT7XJJ0 
ProdomT7XJJ0 
UniProtKBT7YDB2SubName: Full=Inner membrane protein;
InterProT7YDB2 
PFAMT7YDB2 
ProdomT7YDB2 
UniProtKBC6ULV2SubName: Full=Conserved inner membrane protein;
InterProC6ULV2 
PFAMC6ULV2 
ProdomC6ULV2 
UniProtKBT8AG97SubName: Full=Inner membrane protein;
InterProT8AG97 
PFAMT8AG97 
ProdomT8AG97 
UniProtKBC9QSX9SubName: Full=Conserved inner membrane protein;Flags: Precursor;
InterProC9QSX9 
PFAMC9QSX9 
ProdomC9QSX9 
UniProtKBD7X9R3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ72992.1};
InterProD7X9R3 
PFAMD7X9R3 
ProdomD7X9R3 
UniProtKBT8WWW8SubName: Full=Inner membrane protein {ECO:0000313|EMBL:EQX46288.1};
InterProT8WWW8 
PFAMT8WWW8 
ProdomT8WWW8 
UniProtKBL3RV00SubName: Full=Inner membrane protein;
InterProL3RV00 
PFAML3RV00 
ProdomL3RV00 
UniProtKBS1MHK7SubName: Full=Inner membrane protein;
InterProS1MHK7 
PFAMS1MHK7 
ProdomS1MHK7 
UniProtKBT6YZ35SubName: Full=Inner membrane protein;
InterProT6YZ35 
PFAMT6YZ35 
ProdomT6YZ35 
UniProtKBG2F586SubName: Full=Inner membrane protein;
InterProG2F586 
PFAMG2F586 
ProdomG2F586 
UniProtKBI4TQL0SubName: Full=Putative inner membrane protein;
InterProI4TQL0 
PFAMI4TQL0 
ProdomI4TQL0 
UniProtKBL2ZMB4SubName: Full=Inner membrane protein;
InterProL2ZMB4 
PFAML2ZMB4 
ProdomL2ZMB4 
UniProtKBL3DVL6SubName: Full=Inner membrane protein;
InterProL3DVL6 
PFAML3DVL6 
ProdomL3DVL6 
UniProtKBL4KDT8SubName: Full=Inner membrane protein;
InterProL4KDT8 
PFAML4KDT8 
ProdomL4KDT8 
UniProtKBL5FA29SubName: Full=Inner membrane protein;
InterProL5FA29 
PFAML5FA29 
ProdomL5FA29 
UniProtKBL5VHM2SubName: Full=Uncharacterized protein;
InterProL5VHM2 
PFAML5VHM2 
ProdomL5VHM2 
UniProtKBN2ISN3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENA28000.1};
InterProN2ISN3 
PFAMN2ISN3 
ProdomN2ISN3 
UniProtKBS1AQK3SubName: Full=Inner membrane protein;
InterProS1AQK3 
PFAMS1AQK3 
ProdomS1AQK3 
UniProtKBN4P578SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENH04235.1};
InterProN4P578 
PFAMN4P578 
ProdomN4P578 
UniProtKBN2H9B6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENA10889.1};
InterProN2H9B6 
PFAMN2H9B6 
ProdomN2H9B6 
UniProtKBL4SYX5SubName: Full=Inner membrane protein;
InterProL4SYX5 
PFAML4SYX5 
ProdomL4SYX5 
UniProtKBM9F325SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMX15093.1};
InterProM9F325 
PFAMM9F325 
ProdomM9F325 
UniProtKBT6VR22SubName: Full=Inner membrane protein;
InterProT6VR22 
PFAMT6VR22 
ProdomT6VR22 
UniProtKBL4WBL9SubName: Full=Inner membrane protein;
InterProL4WBL9 
PFAML4WBL9 
ProdomL4WBL9 
UniProtKBM9KX69SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMX91845.1};
InterProM9KX69 
PFAMM9KX69 
ProdomM9KX69 
UniProtKBQ2M5X7RecName: Full=Uncharacterized protein YjiN;
InterProQ2M5X7 
PFAMQ2M5X7 
ProdomQ2M5X7 
UniProtKBF4T993SubName: Full=Putative membrane protein {ECO:0000313|EMBL:EGI23316.1};
InterProF4T993 
PFAMF4T993 
ProdomF4T993 
UniProtKBT7G3L8SubName: Full=Inner membrane protein;
InterProT7G3L8 
PFAMT7G3L8 
ProdomT7G3L8 
UniProtKBL3U495SubName: Full=Inner membrane protein;
InterProL3U495 
PFAML3U495 
ProdomL3U495 
UniProtKBL4XDF4SubName: Full=Inner membrane protein;
InterProL4XDF4 
PFAML4XDF4 
ProdomL4XDF4 
UniProtKBN3ELJ5SubName: Full=Uncharacterized protein;
InterProN3ELJ5 
PFAMN3ELJ5 
ProdomN3ELJ5 
UniProtKBT6G1V8SubName: Full=Inner membrane protein;
InterProT6G1V8 
PFAMT6G1V8 
ProdomT6G1V8 
UniProtKBT6KNE2SubName: Full=Inner membrane protein;
InterProT6KNE2 
PFAMT6KNE2 
ProdomT6KNE2 
UniProtKBL3IKY0SubName: Full=Inner membrane protein;
InterProL3IKY0 
PFAML3IKY0 
ProdomL3IKY0 
UniProtKBL3R160SubName: Full=Inner membrane protein;
InterProL3R160 
PFAML3R160 
ProdomL3R160 
UniProtKBL4K0G6SubName: Full=Inner membrane protein;
InterProL4K0G6 
PFAML4K0G6 
ProdomL4K0G6 
UniProtKBL4W1Q5SubName: Full=Inner membrane protein;
InterProL4W1Q5 
PFAML4W1Q5 
ProdomL4W1Q5 
UniProtKBL5DZR2SubName: Full=Inner membrane protein;
InterProL5DZR2 
PFAML5DZR2 
ProdomL5DZR2 
UniProtKBL5GFG6SubName: Full=Inner membrane protein;
InterProL5GFG6 
PFAML5GFG6 
ProdomL5GFG6 
UniProtKBL8C390SubName: Full=Putative inner membrane protein;
InterProL8C390 
PFAML8C390 
ProdomL8C390 
UniProtKBM2M6W5SubName: Full=Uncharacterized protein;
InterProM2M6W5 
PFAMM2M6W5 
ProdomM2M6W5 
UniProtKBN2JPZ9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENA40954.1};
InterProN2JPZ9 
PFAMN2JPZ9 
ProdomN2JPZ9 
UniProtKBN2L0Q6SubName: Full=Uncharacterized protein;
InterProN2L0Q6 
PFAMN2L0Q6 
ProdomN2L0Q6 
UniProtKBL3CJW3SubName: Full=Inner membrane protein;
InterProL3CJW3 
PFAML3CJW3 
ProdomL3CJW3 
UniProtKBL2ZYQ5SubName: Full=Inner membrane protein;
InterProL2ZYQ5 
PFAML2ZYQ5 
ProdomL2ZYQ5 
UniProtKBS1BA04SubName: Full=Inner membrane protein;
InterProS1BA04 
PFAMS1BA04 
ProdomS1BA04 
UniProtKBS1KI63SubName: Full=Inner membrane protein;
InterProS1KI63 
PFAMS1KI63 
ProdomS1KI63 
UniProtKBS1Q6P8SubName: Full=Inner membrane protein;
InterProS1Q6P8 
PFAMS1Q6P8 
ProdomS1Q6P8 
UniProtKBT5T089SubName: Full=Inner membrane protein;
InterProT5T089 
PFAMT5T089 
ProdomT5T089 
UniProtKBF9R0C6SubName: Full=Inner membrane protein;
InterProF9R0C6 
PFAMF9R0C6 
ProdomF9R0C6 
UniProtKBT6SS47SubName: Full=Inner membrane protein;
InterProT6SS47 
PFAMT6SS47 
ProdomT6SS47 
UniProtKBT7AX65SubName: Full=Inner membrane protein;
InterProT7AX65 
PFAMT7AX65 
ProdomT7AX65 
UniProtKBI2PVJ2SubName: Full=Uncharacterized protein;
InterProI2PVJ2 
PFAMI2PVJ2 
ProdomI2PVJ2 
UniProtKBL2UQA6SubName: Full=Inner membrane protein;
InterProL2UQA6 
PFAML2UQA6 
ProdomL2UQA6 
UniProtKBL2YGW7SubName: Full=Inner membrane protein;
InterProL2YGW7 
PFAML2YGW7 
ProdomL2YGW7 
UniProtKBN3MSU3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:END86294.1};
InterProN3MSU3 
PFAMN3MSU3 
ProdomN3MSU3