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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P42905.1
Original Database ID sp P42905
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation ptpc2_ecoli recname: full=putative
n-acetylgalactosamine permease
iic component 2; altname: full=eiic-aga';
altname: full=pts system n-acetylgalactos
...
Sequence Length 133

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region74-122
Protein Length133
Template PDB Code3p03C
Template Region242-300
Sequence Identity29%
E-Value0
GA3410.03
MPQS0.248621
z-DOPE2.26
TSVMod MethodMSALL
TSVMod RMSD11.776
TSVMod NO350.049
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3p03
DBALI3p03C 
JenaImageLibrary3p03 
Target Sequence
UniProtKBW0FUN2SubName: Full=N-acetylgalactosamine permease IIC component 2 {ECO:0000313|EMBL:AHF26732.1};
InterProW0FUN2 
PFAMW0FUN2 
ProdomW0FUN2 
UniProtKBC9QYB0SubName: Full=N-acetylgalactosamine-specific enzyme IIC component of PTS;SubName: Full=Phosphotransferase system PTS sorbose-specific IIC subunit;
InterProC9QYB0 
PFAMC9QYB0 
ProdomC9QYB0 
UniProtKBG2F4Z7SubName: Full=Phosphotransferase system PTS sorbose-specific IIC subunit;
InterProG2F4Z7 
PFAMG2F4Z7 
ProdomG2F4Z7 
UniProtKBI0ZV71SubName: Full=N-acetylgalactosamine-specific enzyme IIC component of PTS;
InterProI0ZV71 
PFAMI0ZV71 
ProdomI0ZV71 
UniProtKBM2MH78SubName: Full=N-acetylgalactosamine-specific enzyme IIC component of PTS;
InterProM2MH78 
PFAMM2MH78 
ProdomM2MH78 
UniProtKBA0A0G3I1Q9SubName: Full=Putative N-acetylgalactosamine permease IIC component 2 protein {ECO:0000313|EMBL:AKK18905.1};
InterProA0A0G3I1Q9 
PFAMA0A0G3I1Q9 
ProdomA0A0G3I1Q9 
UniProtKBP42905RecName: Full=Putative N-acetylgalactosamine permease IIC component 2;AltName: Full=EIIC-Aga';AltName: Full=PTS system N-acetylgalactosamine-specific EIIC component 2;
InterProP42905 
PFAMP42905 
ProdomP42905 
UniProtKBA0A094Y076SubName: Full=N-acetylgalactosamine permease IIC component 2 {ECO:0000313|EMBL:AKO58601.1};SubName: Full=PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:CEE05733.1};
InterProA0A094Y076 
PFAMA0A094Y076 
ProdomA0A094Y076 
UniProtKBF9R3Y3SubName: Full=Phosphotransferase system PTS sorbose-specific IIC subunit;
InterProF9R3Y3 
PFAMF9R3Y3 
ProdomF9R3Y3 
UniProtKBA0A2Y0NXE7SubName: Full=PTS sorbose-specific transporter subunit IIC {ECO:0000313|EMBL:SVF43015.1}
InterProA0A2Y0NXE7 
PFAMA0A2Y0NXE7 
ProdomA0A2Y0NXE7 
UniProtKBC9QYB0SubName: Full=N-acetylgalactosamine-specific enzyme IIC component of PTS;SubName: Full=Phosphotransferase system PTS sorbose-specific IIC subunit;
InterProC9QYB0 
PFAMC9QYB0 
ProdomC9QYB0 
UniProtKBF9R3Y3SubName: Full=Phosphotransferase system PTS sorbose-specific IIC subunit;
InterProF9R3Y3 
PFAMF9R3Y3 
ProdomF9R3Y3 
UniProtKBG2F4Z7SubName: Full=Phosphotransferase system PTS sorbose-specific IIC subunit;
InterProG2F4Z7 
PFAMG2F4Z7 
ProdomG2F4Z7 
UniProtKBI0ZV71SubName: Full=N-acetylgalactosamine-specific enzyme IIC component of PTS;
InterProI0ZV71 
PFAMI0ZV71 
ProdomI0ZV71 
UniProtKBP42905.1PTPC2_ECOLI RecName: Full=Putative N-acetylgalactosamine permease IIC component 2; AltName: Full=EIIC-Aga'; AltName: Full=PTS system N-acetylgalactosamine-specific EIIC component 2
InterProP42905.1 
PFAMP42905.1 
ProdomP42905.1 
UniProtKBP42905RecName: Full=Putative N-acetylgalactosamine permease IIC component 2;AltName: Full=EIIC-Aga';AltName: Full=PTS system N-acetylgalactosamine-specific EIIC component 2;
InterProP42905 
PFAMP42905 
ProdomP42905 
GenPept808719291N-acetylgalactosamine permease IIC component 2
GenPept33757404Sequence 382 from patent US 6589738
GenPept932861220PTS system, N-acetylgalactosamine-specific IIC component
GenPept899732852N-acetylgalactosamine permease IIC component 2
GenPept899728382N-acetylgalactosamine permease IIC component 2
GenPept899724026N-acetylgalactosamine permease IIC component 2
GenPept827623171Putative N-acetylgalactosamine permease IIC component 2 protein
GenPept827619056Putative N-acetylgalactosamine permease IIC component 2 protein
GenPept687678235PTS system N-acetylgalactosameine-specific IIC component 2, subunit of N-acetyl-D-galactosamine PTS transporter
GenPept687673945PTS system N-acetylgalactosameine-specific IIC component 2, subunit of N-acetyl-D-galactosamine PTS transporter
GenPept63088999unnamed protein product
GenPept606074ORF_o133
GenPept571053170N-acetylgalactosamine permease IIC component 2
GenPept315137722N-acetylgalactosamine-specific enzyme IIC component of PTS
GenPept260447836phosphotransferase system PTS sorbose-specific IIC subunit
GenPept1789522N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene)
GenPept16131026 (NC_000913) PTS system N-acetylgalactosameine-specific IIC component 2 [Escherichia coli K12]
GenPept732683046N-acetylgalactosamine permease IIC component 2
GenPept7466899B65103 PTS system, n-acetylgalactosamine-specific IIc component 2 - Escherichia coli (strain K-12)
GenPept808736409N-acetylgalactosamine permease IIC component 2
GenPept808731978N-acetylgalactosamine permease IIC component 2
GenPept808723661N-acetylgalactosamine permease IIC component 2
GenPept808714881N-acetylgalactosamine permease IIC component 2
GenPept808710514N-acetylgalactosamine permease IIC component 2
GenPept808706158N-acetylgalactosamine permease IIC component 2
GenPept808701784N-acetylgalactosamine permease IIC component 2
GenPept1172737PTPC2_ECOLI RecName: Full=Putative N-acetylgalactosamine permease IIC component 2; AltName: Full=EIIC-Aga'; AltName: Full=PTS system N-acetylgalactosamine-specific EIIC component 2
GenBankAAA57937.1 ORF_o133 [Escherichia coli str. K-12 substr. MG1655]
GenBankACX38258.1 phosphotransferase system PTS sorbose-specific IIC subunit [Escherichia coli DH1]