University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P43319.1
Original Database ID ref NP_417614.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation yrak_ecoli recname: full=uncharacterized
fimbrial-like protein yrak; flags:
prec ursor
Sequence Length 363

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region20-361
Protein Length363
Template PDB Code5afoA
Template Region1-324
Sequence Identity21%
E-Value1.8e-11
GA3411
MPQS1.02015
z-DOPE0.38
TSVMod MethodMSALL
TSVMod RMSD7.047
TSVMod NO350.587
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB5afo
DBALI5afoA 
JenaImageLibrary5afo 
Target Sequence
UniProtKBN4G3W3SubName: Full=Fimbrial family protein;
InterProN4G3W3 
PFAMN4G3W3 
ProdomN4G3W3 
UniProtKBL3INE9SubName: Full=Fimbrial-like adhesin protein;
InterProL3INE9 
PFAML3INE9 
ProdomL3INE9 
UniProtKBA0A037YKV9SubName: Full=Fimbrial protein {ECO:0000313|EMBL:KIH36630.1};SubName: Full=Fimbrial-like adhesin protein {ECO:0000313|EMBL:KLW97051.1};SubName: Full=Predicted fimbrial-like adhesin protein {ECO:000031
InterProA0A037YKV9 
PFAMA0A037YKV9 
ProdomA0A037YKV9 
UniProtKBA0A069XRT4SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDU32660.1};
InterProA0A069XRT4 
PFAMA0A069XRT4 
ProdomA0A069XRT4 
UniProtKBA0A069Z9K9SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDU54029.1};
InterProA0A069Z9K9 
PFAMA0A069Z9K9 
ProdomA0A069Z9K9 
UniProtKBA0A071AYT5SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDY62155.1};
InterProA0A071AYT5 
PFAMA0A071AYT5 
ProdomA0A071AYT5 
UniProtKBA0A071C9W1SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDY88377.1};
InterProA0A071C9W1 
PFAMA0A071C9W1 
ProdomA0A071C9W1 
UniProtKBA0A071CIN2SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDZ18762.1};
InterProA0A071CIN2 
PFAMA0A071CIN2 
ProdomA0A071CIN2 
UniProtKBA0A071DF98SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDZ39026.1};
InterProA0A071DF98 
PFAMA0A071DF98 
ProdomA0A071DF98 
UniProtKBA0A073TIG9SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KEL28139.1};
InterProA0A073TIG9 
PFAMA0A073TIG9 
ProdomA0A073TIG9 
UniProtKBA0A079FAX5SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDY53336.1};
InterProA0A079FAX5 
PFAMA0A079FAX5 
ProdomA0A079FAX5 
UniProtKBA8A4W1SubName: Full=Putative fimbrial protein;
InterProA8A4W1 
PFAMA8A4W1 
ProdomA8A4W1 
UniProtKBL3QQ50SubName: Full=Fimbrial-like adhesin protein;
InterProL3QQ50 
PFAML3QQ50 
ProdomL3QQ50 
UniProtKBK5FJZ6SubName: Full=GyraK;
InterProK5FJZ6 
PFAMK5FJZ6 
ProdomK5FJZ6 
UniProtKBI2PKB1SubName: Full=Uncharacterized protein;
InterProI2PKB1 
PFAMI2PKB1 
ProdomI2PKB1 
UniProtKBI2QY99SubName: Full=Uncharacterized protein;
InterProI2QY99 
PFAMI2QY99 
ProdomI2QY99 
UniProtKBN4NQB9SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:ENH00422.1};
InterProN4NQB9 
PFAMN4NQB9 
ProdomN4NQB9 
UniProtKBP43319RecName: Full=Uncharacterized fimbrial-like protein YraK;Flags: Precursor;
InterProP43319 
PFAMP43319 
ProdomP43319 
UniProtKBI2YPK0SubName: Full=Uncharacterized protein;
InterProI2YPK0 
PFAMI2YPK0 
ProdomI2YPK0 
UniProtKBI2ZV12SubName: Full=Putative lipoprotein;
InterProI2ZV12 
PFAMI2ZV12 
ProdomI2ZV12 
UniProtKBS0ZGU1SubName: Full=Fimbrial-like adhesin protein;
InterProS0ZGU1 
PFAMS0ZGU1 
ProdomS0ZGU1 
UniProtKBI4TZI7SubName: Full=Putative fimbrial protein;
InterProI4TZI7 
PFAMI4TZI7 
ProdomI4TZI7 
UniProtKBS0V5B0SubName: Full=Fimbrial-like adhesin protein {ECO:0000313|EMBL:EOU56627.1};
InterProS0V5B0 
PFAMS0V5B0 
ProdomS0V5B0 
UniProtKBK5BND0SubName: Full=Putative fimbrial protein {ECO:0000313|EMBL:EKJ83742.1};
InterProK5BND0 
PFAMK5BND0 
ProdomK5BND0 
UniProtKBA0A079H3B6SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KDY97929.1};
InterProA0A079H3B6 
PFAMA0A079H3B6 
ProdomA0A079H3B6 
UniProtKBA0A080EKC9SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KEN46285.1};
InterProA0A080EKC9 
PFAMA0A080EKC9 
ProdomA0A080EKC9 
UniProtKBM8NCS4SubName: Full=Fimbrial family protein;
InterProM8NCS4 
PFAMM8NCS4 
ProdomM8NCS4 
UniProtKBM8VQM3SubName: Full=Fimbrial family protein;
InterProM8VQM3 
PFAMM8VQM3 
ProdomM8VQM3 
UniProtKBM9BMA9SubName: Full=Fimbrial family protein;
InterProM9BMA9 
PFAMM9BMA9 
ProdomM9BMA9 
UniProtKBM9FQE2SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:EMX29710.1};
InterProM9FQE2 
PFAMM9FQE2 
ProdomM9FQE2 
UniProtKBM9GCI8SubName: Full=Fimbrial family protein;
InterProM9GCI8 
PFAMM9GCI8 
ProdomM9GCI8 
UniProtKBN2JKW7SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:ENA38075.1};
InterProN2JKW7 
PFAMN2JKW7 
ProdomN2JKW7 
UniProtKBN2QF64SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:ENB09855.1};
InterProN2QF64 
PFAMN2QF64 
ProdomN2QF64 
UniProtKBN2QRF0SubName: Full=Fimbrial family protein;
InterProN2QRF0 
PFAMN2QRF0 
ProdomN2QRF0 
UniProtKBN3F447SubName: Full=Fimbrial family protein;
InterProN3F447 
PFAMN3F447 
ProdomN3F447 
UniProtKBN3PMX8SubName: Full=Fimbrial family protein;
InterProN3PMX8 
PFAMN3PMX8 
ProdomN3PMX8 
UniProtKBM8LCP0SubName: Full=Fimbrial family protein;
InterProM8LCP0 
PFAMM8LCP0 
ProdomM8LCP0 
UniProtKBM8L7F8SubName: Full=Fimbrial family protein;
InterProM8L7F8 
PFAMM8L7F8 
ProdomM8L7F8 
UniProtKBM7W4H8SubName: Full=Putative fimbrial-like adhesin protein (LpfD-like);
InterProM7W4H8 
PFAMM7W4H8 
ProdomM7W4H8 
UniProtKBA0A080F4V1SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:KEN53059.1};
InterProA0A080F4V1 
PFAMA0A080F4V1 
ProdomA0A080F4V1 
UniProtKBA0A0E1M1V3SubName: Full=Putative fimbrial-like adhesin protein {ECO:0000313|EMBL:AJF57965.1};
InterProA0A0E1M1V3 
PFAMA0A0E1M1V3 
ProdomA0A0E1M1V3 
UniProtKBA0A0E3KPT3SubName: Full=Putative fimbrial-like protein YraK {ECO:0000313|EMBL:AKA92328.1};
InterProA0A0E3KPT3 
PFAMA0A0E3KPT3 
ProdomA0A0E3KPT3 
UniProtKBA0A0G3HNT8SubName: Full=Putative fimbrial-like adhesin protein {ECO:0000313|EMBL:AKK15029.1};
InterProA0A0G3HNT8 
PFAMA0A0G3HNT8 
ProdomA0A0G3HNT8 
UniProtKBL4NUE4SubName: Full=Fimbrial-like adhesin protein;
InterProL4NUE4 
PFAML4NUE4 
ProdomL4NUE4 
UniProtKBL4P423SubName: Full=Fimbrial-like adhesin protein;
InterProL4P423 
PFAML4P423 
ProdomL4P423 
UniProtKBL4W9A9SubName: Full=Fimbrial-like adhesin protein;
InterProL4W9A9 
PFAML4W9A9 
ProdomL4W9A9 
UniProtKBL4WL43SubName: Full=Fimbrial-like adhesin protein;
InterProL4WL43 
PFAML4WL43 
ProdomL4WL43 
UniProtKBL5FYA6SubName: Full=Fimbrial-like adhesin protein;
InterProL5FYA6 
PFAML5FYA6 
ProdomL5FYA6 
UniProtKBM2NQR1SubName: Full=Fimbrial-like adhesin protein;
InterProM2NQR1 
PFAMM2NQR1 
ProdomM2NQR1 
UniProtKBN4DBG0SubName: Full=Fimbrial family protein;
InterProN4DBG0 
PFAMN4DBG0 
ProdomN4DBG0 
UniProtKBI0ZV59SubName: Full=Putative fimbrial protein;
InterProI0ZV59 
PFAMI0ZV59 
ProdomI0ZV59 
UniProtKBL2Z089SubName: Full=Fimbrial-like adhesin protein;
InterProL2Z089 
PFAML2Z089 
ProdomL2Z089 
UniProtKBI4J6V5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF84964.1};
InterProI4J6V5 
PFAMI4J6V5 
ProdomI4J6V5 
UniProtKBL3HZS7SubName: Full=Fimbrial-like adhesin protein {ECO:0000313|EMBL:ELD67964.1};
InterProL3HZS7 
PFAML3HZS7 
ProdomL3HZS7 
UniProtKBB1XGV7SubName: Full=Predicted fimbrial-like adhesin protein;
InterProB1XGV7 
PFAMB1XGV7 
ProdomB1XGV7 
UniProtKBL3V909SubName: Full=Fimbrial-like adhesin protein;
InterProL3V909 
PFAML3V909 
ProdomL3V909 
UniProtKBC5W994SubName: Full=Putative fimbrial protein {ECO:0000313|EMBL:ACT27665.1};
InterProC5W994 
PFAMC5W994 
ProdomC5W994 
UniProtKBL5C562SubName: Full=Fimbrial-like adhesin protein;
InterProL5C562 
PFAML5C562 
ProdomL5C562 
UniProtKBM7UII8SubName: Full=Putative fimbrial-like adhesin protein (LpfD-like);
InterProM7UII8 
PFAMM7UII8 
ProdomM7UII8 
UniProtKBF9R3Z4SubName: Full=Putative fimbrial protein;
InterProF9R3Z4 
PFAMF9R3Z4 
ProdomF9R3Z4 
UniProtKBL3WSP5SubName: Full=Fimbrial-like adhesin protein;
InterProL3WSP5 
PFAML3WSP5 
ProdomL3WSP5 
UniProtKBN4DWV7SubName: Full=Fimbrial family protein;
InterProN4DWV7 
PFAMN4DWV7 
ProdomN4DWV7 
UniProtKBQ2M965RecName: Full=Uncharacterized fimbrial-like protein YraK;Flags: Precursor;
InterProQ2M965 
PFAMQ2M965 
ProdomQ2M965 
UniProtKBN4N2G8SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:ENG95058.1};
InterProN4N2G8 
PFAMN4N2G8 
ProdomN4N2G8 
UniProtKBH4W1R3SubName: Full=Fimbrial-like adhesin protein;
InterProH4W1R3 
PFAMH4W1R3 
ProdomH4W1R3 
UniProtKBL3ESJ5SubName: Full=Fimbrial-like adhesin protein;
InterProL3ESJ5 
PFAML3ESJ5 
ProdomL3ESJ5 
UniProtKBH0QE85SubName: Full=Predicted fimbrial-like adhesin protein;
InterProH0QE85 
PFAMH0QE85 
ProdomH0QE85 
UniProtKBL2VI02SubName: Full=Fimbrial-like adhesin protein {ECO:0000313|EMBL:ELC14464.1};
InterProL2VI02 
PFAML2VI02 
ProdomL2VI02 
UniProtKBL3ZN73SubName: Full=Fimbrial-like adhesin protein;
InterProL3ZN73 
PFAML3ZN73 
ProdomL3ZN73 
UniProtKBN2H1L7SubName: Full=Fimbrial family protein;
InterProN2H1L7 
PFAMN2H1L7 
ProdomN2H1L7 
UniProtKBI2T255SubName: Full=Uncharacterized protein;
InterProI2T255 
PFAMI2T255 
ProdomI2T255 
UniProtKBL3I6F2SubName: Full=Fimbrial-like adhesin protein;
InterProL3I6F2 
PFAML3I6F2 
ProdomL3I6F2 
UniProtKBL3TJ34SubName: Full=Fimbrial-like adhesin protein;
InterProL3TJ34 
PFAML3TJ34 
ProdomL3TJ34 
UniProtKBC6UEX7SubName: Full=Predicted fimbrial-like adhesin protein;
InterProC6UEX7 
PFAMC6UEX7 
ProdomC6UEX7 
UniProtKBM8PIX3SubName: Full=Fimbrial family protein;
InterProM8PIX3 
PFAMM8PIX3 
ProdomM8PIX3 
UniProtKBH5REW6SubName: Full=Putative fimbrial protein;
InterProH5REW6 
PFAMH5REW6 
ProdomH5REW6 
UniProtKBI2I6I2SubName: Full=Putative fimbrial protein;
InterProI2I6I2 
PFAMI2I6I2 
ProdomI2I6I2 
UniProtKBC9QYA0SubName: Full=Predicted fimbrial-like adhesin protein;SubName: Full=Putative fimbrial protein;Flags: Precursor;
InterProC9QYA0 
PFAMC9QYA0 
ProdomC9QYA0 
UniProtKBE3PK57SubName: Full=Predicted fimbrial-like adhesin protein {ECO:0000313|EMBL:CBJ02913.1};
InterProE3PK57 
PFAME3PK57 
ProdomE3PK57 
UniProtKBM8LAZ4SubName: Full=Fimbrial family protein;
InterProM8LAZ4 
PFAMM8LAZ4 
ProdomM8LAZ4 
UniProtKBF4SNM4SubName: Full=Putative fimbrial protein {ECO:0000313|EMBL:EGI09540.1};
InterProF4SNM4 
PFAMF4SNM4 
ProdomF4SNM4 
UniProtKBM8NLL3SubName: Full=Fimbrial family protein;
InterProM8NLL3 
PFAMM8NLL3 
ProdomM8NLL3 
UniProtKBG2CQN8SubName: Full=Putative uncharacterized protein;
InterProG2CQN8 
PFAMG2CQN8 
ProdomG2CQN8 
UniProtKBG2F4Y6SubName: Full=Putative fimbrial protein;
InterProG2F4Y6 
PFAMG2F4Y6 
ProdomG2F4Y6 
UniProtKBN2HGA2SubName: Full=Fimbrial family protein;
InterProN2HGA2 
PFAMN2HGA2 
ProdomN2HGA2 
UniProtKBH4XAA4SubName: Full=Putative fimbrial protein;
InterProH4XAA4 
PFAMH4XAA4 
ProdomH4XAA4 
UniProtKBN2G2G9SubName: Full=Fimbrial family protein;
InterProN2G2G9 
PFAMN2G2G9 
ProdomN2G2G9 
UniProtKBC6EH80SubName: Full=Putative fimbrial protein {ECO:0000313|EMBL:ACT27665.1};
InterProC6EH80 
PFAMC6EH80 
ProdomC6EH80 
UniProtKBL4K719SubName: Full=Fimbrial-like adhesin protein;
InterProL4K719 
PFAML4K719 
ProdomL4K719 
UniProtKBL3RBJ5SubName: Full=Fimbrial-like adhesin protein;
InterProL3RBJ5 
PFAML3RBJ5 
ProdomL3RBJ5 
UniProtKBM9K215SubName: Full=Fimbrial family protein {ECO:0000313|EMBL:EMX83464.1};
InterProM9K215 
PFAMM9K215 
ProdomM9K215 
UniProtKBI2YAV0SubName: Full=Uncharacterized protein;
InterProI2YAV0 
PFAMI2YAV0 
ProdomI2YAV0 
UniProtKBS0ZKK8SubName: Full=Fimbrial-like adhesin protein;
InterProS0ZKK8 
PFAMS0ZKK8 
ProdomS0ZKK8 
UniProtKBI4V3F2SubName: Full=Putative fimbrial protein;
InterProI4V3F2 
PFAMI4V3F2 
ProdomI4V3F2 
UniProtKBL2U355SubName: Full=Fimbrial-like adhesin protein;
InterProL2U355 
PFAML2U355 
ProdomL2U355 
UniProtKBK5HIH7SubName: Full=Fimbrial family protein;
InterProK5HIH7 
PFAMK5HIH7 
ProdomK5HIH7 
UniProtKBL3TGF7SubName: Full=Fimbrial-like adhesin protein;
InterProL3TGF7 
PFAML3TGF7 
ProdomL3TGF7 
UniProtKBC1NEC0SubName: Full=Putative uncharacterized protein;
InterProC1NEC0 
PFAMC1NEC0 
ProdomC1NEC0 
UniProtKBC4ZSN6SubName: Full=Predicted fimbrial-like adhesin protein;
InterProC4ZSN6 
PFAMC4ZSN6 
ProdomC4ZSN6 
UniProtKBN4DY06SubName: Full=Fimbrial family protein;
InterProN4DY06 
PFAMN4DY06 
ProdomN4DY06