University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link C4ZSN9.1
Original Database ID ref NP_417617.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation yran_ecobw recname: full=upf0102
protein yran
Sequence Length 131

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region22-128
Protein Length131
Template PDB Code3fovA
Template Region23-127
Sequence Identity34%
E-Value0
GA3411
MPQS1.25459
z-DOPE-1.18
TSVMod MethodMSALL
TSVMod RMSD3.151
TSVMod NO350.818
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3fovcrystal structure of protein rpa0323 of unknown function from rhodopseudomonas palustris
DBALI3fovA 
CATH3.40.1350.10 Domain: 3fovA00 Trna Endonuclease; Chain: A, domain 1 (97%)
JenaImageLibrary3fov 
Target Sequence
UniProtKBC9QY97RecName: Full=UPF0102 protein YraN;
InterProC9QY97 
PFAMC9QY97 
ProdomC9QY97 
UniProtKBA0A080HWB1RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A080HWB1 
PFAMA0A080HWB1 
ProdomA0A080HWB1 
UniProtKBA0A0A0FKR3RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A0A0FKR3 
PFAMA0A0A0FKR3 
ProdomA0A0A0FKR3 
UniProtKBA0A0E1T3T0RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A0E1T3T0 
PFAMA0A0E1T3T0 
ProdomA0A0E1T3T0 
UniProtKBA0A0E3H406RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A0E3H406 
PFAMA0A0E3H406 
ProdomA0A0E3H406 
UniProtKBG2F4Y3RecName: Full=UPF0102 protein YraN;
InterProG2F4Y3 
PFAMG2F4Y3 
ProdomG2F4Y3 
UniProtKBG2CQP1RecName: Full=UPF0102 protein YraN;
InterProG2CQP1 
PFAMG2CQP1 
ProdomG2CQP1 
UniProtKBG2BE46RecName: Full=UPF0102 protein YraN;
InterProG2BE46 
PFAMG2BE46 
ProdomG2BE46 
UniProtKBH4WG21RecName: Full=UPF0102 protein YraN;
InterProH4WG21 
PFAMH4WG21 
ProdomH4WG21 
UniProtKBH4W1R6RecName: Full=UPF0102 protein YraN;
InterProH4W1R6 
PFAMH4W1R6 
ProdomH4W1R6 
UniProtKBI0ZV56RecName: Full=UPF0102 protein YraN;
InterProI0ZV56 
PFAMI0ZV56 
ProdomI0ZV56 
UniProtKBA0A080END2RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A080END2 
PFAMA0A080END2 
ProdomA0A080END2 
UniProtKBA0A079H035RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A079H035 
PFAMA0A079H035 
ProdomA0A079H035 
UniProtKBL2Z184RecName: Full=UPF0102 protein YraN;
InterProL2Z184 
PFAML2Z184 
ProdomL2Z184 
UniProtKBD7ZTP7RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProD7ZTP7 
PFAMD7ZTP7 
ProdomD7ZTP7 
UniProtKBD8AND4RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProD8AND4 
PFAMD8AND4 
ProdomD8AND4 
UniProtKBL3WRD1RecName: Full=UPF0102 protein YraN;
InterProL3WRD1 
PFAML3WRD1 
ProdomL3WRD1 
UniProtKBL3ZML8RecName: Full=UPF0102 protein YraN;
InterProL3ZML8 
PFAML3ZML8 
ProdomL3ZML8 
UniProtKBE2WY10RecName: Full=UPF0102 protein YraN;
InterProE2WY10 
PFAME2WY10 
ProdomE2WY10 
UniProtKBE3PK60RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProE3PK60 
PFAME3PK60 
ProdomE3PK60 
UniProtKBL4NVE3RecName: Full=UPF0102 protein YraN;
InterProL4NVE3 
PFAML4NVE3 
ProdomL4NVE3 
UniProtKBL4WKW4RecName: Full=UPF0102 protein YraN;
InterProL4WKW4 
PFAML4WKW4 
ProdomL4WKW4 
UniProtKBE9WI89RecName: Full=UPF0102 protein YraN;
InterProE9WI89 
PFAME9WI89 
ProdomE9WI89 
UniProtKBE9WTH1RecName: Full=UPF0102 protein YraN;
InterProE9WTH1 
PFAME9WTH1 
ProdomE9WTH1 
UniProtKBH4VLC1RecName: Full=UPF0102 protein YraN;
InterProH4VLC1 
PFAMH4VLC1 
ProdomH4VLC1 
UniProtKBG2AZP4RecName: Full=UPF0102 protein YraN;
InterProG2AZP4 
PFAMG2AZP4 
ProdomG2AZP4 
UniProtKBA0A029NBM7RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A029NBM7 
PFAMA0A029NBM7 
ProdomA0A029NBM7 
UniProtKBA0A069XYF6RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A069XYF6 
PFAMA0A069XYF6 
ProdomA0A069XYF6 
UniProtKBA0A069Z505RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A069Z505 
PFAMA0A069Z505 
ProdomA0A069Z505 
UniProtKBA0A070SWB6RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A070SWB6 
PFAMA0A070SWB6 
ProdomA0A070SWB6 
UniProtKBA0A070UYJ8RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A070UYJ8 
PFAMA0A070UYJ8 
ProdomA0A070UYJ8 
UniProtKBA0A070Y9E6RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A070Y9E6 
PFAMA0A070Y9E6 
ProdomA0A070Y9E6 
UniProtKBA0A071AL20RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A071AL20 
PFAMA0A071AL20 
ProdomA0A071AL20 
UniProtKBA0A071BX76RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A071BX76 
PFAMA0A071BX76 
ProdomA0A071BX76 
UniProtKBA0A071CVP4RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A071CVP4 
PFAMA0A071CVP4 
ProdomA0A071CVP4 
UniProtKBA0A071DC56RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A071DC56 
PFAMA0A071DC56 
ProdomA0A071DC56 
UniProtKBB3XGY1RecName: Full=UPF0102 protein YraN;
InterProB3XGY1 
PFAMB3XGY1 
ProdomB3XGY1 
UniProtKBB2NAS9RecName: Full=UPF0102 protein YraN;
InterProB2NAS9 
PFAMB2NAS9 
ProdomB2NAS9 
UniProtKBL3INM1RecName: Full=UPF0102 protein YraN;
InterProL3INM1 
PFAML3INM1 
ProdomL3INM1 
UniProtKBI2X6K4RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProI2X6K4 
PFAMI2X6K4 
ProdomI2X6K4 
UniProtKBI2Y8J8RecName: Full=UPF0102 protein YraN;
InterProI2Y8J8 
PFAMI2Y8J8 
ProdomI2Y8J8 
UniProtKBI2PKB4RecName: Full=UPF0102 protein YraN;
InterProI2PKB4 
PFAMI2PKB4 
ProdomI2PKB4 
UniProtKBK3HT23RecName: Full=UPF0102 protein YraN;
InterProK3HT23 
PFAMK3HT23 
ProdomK3HT23 
UniProtKBI4TZI4RecName: Full=UPF0102 protein YraN;
InterProI4TZI4 
PFAMI4TZI4 
ProdomI4TZI4 
UniProtKBK5BVW5RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProK5BVW5 
PFAMK5BVW5 
ProdomK5BVW5 
UniProtKBE9Y2G4RecName: Full=UPF0102 protein YraN;
InterProE9Y2G4 
PFAME9Y2G4 
ProdomE9Y2G4 
UniProtKBK5GSJ8RecName: Full=UPF0102 protein YraN;
InterProK5GSJ8 
PFAMK5GSJ8 
ProdomK5GSJ8 
UniProtKBF9R3Z7RecName: Full=UPF0102 protein YraN;
InterProF9R3Z7 
PFAMF9R3Z7 
ProdomF9R3Z7 
UniProtKBL2U3Y9RecName: Full=UPF0102 protein YraN;
InterProL2U3Y9 
PFAML2U3Y9 
ProdomL2U3Y9 
UniProtKBA0A073GLB7RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A073GLB7 
PFAMA0A073GLB7 
ProdomA0A073GLB7 
UniProtKBL3TLG8RecName: Full=UPF0102 protein YraN;
InterProL3TLG8 
PFAML3TLG8 
ProdomL3TLG8 
UniProtKBA0A073TGT4RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A073TGT4 
PFAMA0A073TGT4 
ProdomA0A073TGT4 
UniProtKBE6B544RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProE6B544 
PFAME6B544 
ProdomE6B544 
UniProtKBA0A079F8R0RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A079F8R0 
PFAMA0A079F8R0 
ProdomA0A079F8R0 
UniProtKBA0A0E0U4X4RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A0E0U4X4 
PFAMA0A0E0U4X4 
ProdomA0A0E0U4X4 
UniProtKBH4V6B6RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProH4V6B6 
PFAMH4V6B6 
ProdomH4V6B6 
UniProtKBI2I6H9RecName: Full=UPF0102 protein YraN;
InterProI2I6H9 
PFAMI2I6H9 
ProdomI2I6H9 
UniProtKBI4J6V8RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProI4J6V8 
PFAMI4J6V8 
ProdomI4J6V8 
UniProtKBK5GPQ2RecName: Full=UPF0102 protein YraN;
InterProK5GPQ2 
PFAMK5GPQ2 
ProdomK5GPQ2 
UniProtKBB1XGW0RecName: Full=UPF0102 protein YraN;
InterProB1XGW0 
PFAMB1XGW0 
ProdomB1XGW0 
UniProtKBI4TXF9RecName: Full=UPF0102 protein YraN;
InterProI4TXF9 
PFAMI4TXF9 
ProdomI4TXF9 
UniProtKBF4SNM7RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProF4SNM7 
PFAMF4SNM7 
ProdomF4SNM7 
UniProtKBL4K896RecName: Full=UPF0102 protein YraN;
InterProL4K896 
PFAML4K896 
ProdomL4K896 
UniProtKBC6UEY0RecName: Full=UPF0102 protein YraN;
InterProC6UEY0 
PFAMC6UEY0 
ProdomC6UEY0 
UniProtKBC4ZSN9RecName: Full=UPF0102 protein YraN;
InterProC4ZSN9 
PFAMC4ZSN9 
ProdomC4ZSN9 
UniProtKBA0A074HKK5RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A074HKK5 
PFAMA0A074HKK5 
ProdomA0A074HKK5 
UniProtKBL3QPI0RecName: Full=UPF0102 protein YraN;
InterProL3QPI0 
PFAML3QPI0 
ProdomL3QPI0 
UniProtKBA0A074IE18RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A074IE18 
PFAMA0A074IE18 
ProdomA0A074IE18 
UniProtKBI2QYA2RecName: Full=UPF0102 protein YraN;
InterProI2QYA2 
PFAMI2QYA2 
ProdomI2QYA2 
UniProtKBL3KES9RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProL3KES9 
PFAML3KES9 
ProdomL3KES9 
UniProtKBD8B157RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProD8B157 
PFAMD8B157 
ProdomD8B157 
UniProtKBA0A079DPC7RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A079DPC7 
PFAMA0A079DPC7 
ProdomA0A079DPC7 
UniProtKBH4UPK4RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProH4UPK4 
PFAMH4UPK4 
ProdomH4UPK4 
UniProtKBI2ZPL0RecName: Full=UPF0102 protein YraN;
InterProI2ZPL0 
PFAMI2ZPL0 
ProdomI2ZPL0 
UniProtKBF4M157RecName: Full=UPF0102 protein YraN;
InterProF4M157 
PFAMF4M157 
ProdomF4M157 
UniProtKBL3UDR2RecName: Full=UPF0102 protein YraN;
InterProL3UDR2 
PFAML3UDR2 
ProdomL3UDR2 
UniProtKBL3V7U0RecName: Full=UPF0102 protein YraN;
InterProL3V7U0 
PFAML3V7U0 
ProdomL3V7U0 
UniProtKBI2YPN1RecName: Full=UPF0102 protein YraN;
InterProI2YPN1 
PFAMI2YPN1 
ProdomI2YPN1 
UniProtKBK3IFQ8RecName: Full=UPF0102 protein YraN;
InterProK3IFQ8 
PFAMK3IFQ8 
ProdomK3IFQ8 
UniProtKBK3IGL2RecName: Full=UPF0102 protein YraN;
InterProK3IGL2 
PFAMK3IGL2 
ProdomK3IGL2 
UniProtKBB1IQX3RecName: Full=UPF0102 protein YraN;
InterProB1IQX3 
PFAMB1IQX3 
ProdomB1IQX3 
UniProtKBE9YJ78RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProE9YJ78 
PFAME9YJ78 
ProdomE9YJ78 
UniProtKBL3EUL3RecName: Full=UPF0102 protein YraN;
InterProL3EUL3 
PFAML3EUL3 
ProdomL3EUL3 
UniProtKBC1NEC3RecName: Full=UPF0102 protein yraN;
InterProC1NEC3 
PFAMC1NEC3 
ProdomC1NEC3 
UniProtKBL3M089RecName: Full=UPF0102 protein YraN;
InterProL3M089 
PFAML3M089 
ProdomL3M089 
UniProtKBL3TIV0RecName: Full=UPF0102 protein YraN;
InterProL3TIV0 
PFAML3TIV0 
ProdomL3TIV0 
UniProtKBC5W997SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT27662.1};
InterProC5W997 
PFAMC5W997 
ProdomC5W997 
UniProtKBG0F755RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProG0F755 
PFAMG0F755 
ProdomG0F755 
UniProtKBH9UX50RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProH9UX50 
PFAMH9UX50 
ProdomH9UX50 
UniProtKBH4XAA7RecName: Full=UPF0102 protein YraN;
InterProH4XAA7 
PFAMH4XAA7 
ProdomH4XAA7 
UniProtKBL3R9Z2RecName: Full=UPF0102 protein YraN;
InterProL3R9Z2 
PFAML3R9Z2 
ProdomL3R9Z2 
UniProtKBE1HKB8RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProE1HKB8 
PFAME1HKB8 
ProdomE1HKB8 
UniProtKBL4W953RecName: Full=UPF0102 protein YraN;
InterProL4W953 
PFAML4W953 
ProdomL4W953 
UniProtKBL3WDQ9RecName: Full=UPF0102 protein YraN;
InterProL3WDQ9 
PFAML3WDQ9 
ProdomL3WDQ9 
UniProtKBA0A079FV48RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A079FV48 
PFAMA0A079FV48 
ProdomA0A079FV48 
UniProtKBA0A080GH56RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A080GH56 
PFAMA0A080GH56 
ProdomA0A080GH56 
UniProtKBA0A0E1M3N3RecName: Full=UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048};
InterProA0A0E1M3N3 
PFAMA0A0E1M3N3 
ProdomA0A0E1M3N3 
UniProtKBA0A0H3X888SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM36704.1};
InterProA0A0H3X888 
PFAMA0A0H3X888 
ProdomA0A0H3X888 
UniProtKBH0QE88RecName: Full=UPF0102 protein YraN;
InterProH0QE88 
PFAMH0QE88 
ProdomH0QE88 
UniProtKBC6EH77SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT27662.1};
InterProC6EH77 
PFAMC6EH77 
ProdomC6EH77