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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P45570.1
Original Database ID ref NP_415060.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation ybci_ecoli recname: full=inner
membrane protein ybci
Sequence Length 173

Dataset Information:

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Model Information

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Target Region17-74
Protein Length173
Template PDB Code1kf6D
Template Region21-77
Sequence Identity37%
E-Value0.78
GA3410.06
MPQS0.38046
z-DOPE2.35
TSVMod MethodMTALL
TSVMod RMSD8.71
TSVMod NO350.02
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1kf6e. coli quinol-fumarate reductase with bound inhibitor hqno ; EC: 1.3.99.1 ; PFAM: PF00037 PF00111 PF00890 PF02300 PF02313 PF02910 ; SCOP: 72400
DBALI1kf6D 
CATH1.20.1300.10 Domain: 1kf6D00 Fumarate reductase respiratory complex transmembrane subunits (48%)
JenaImageLibrary1kf6 
Target Sequence
UniProtKBI2PSC9SubName: Full=Inner membrane protein ybcI;
InterProI2PSC9 
PFAMI2PSC9 
ProdomI2PSC9 
UniProtKBA0A079CVS9SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:KDY13929.1};
InterProA0A079CVS9 
PFAMA0A079CVS9 
ProdomA0A079CVS9 
UniProtKBA0A073TVR9SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:KEL25811.1};
InterProA0A073TVR9 
PFAMA0A073TVR9 
ProdomA0A073TVR9 
UniProtKBA0A069Z3L2SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:KDU53505.1};
InterProA0A069Z3L2 
PFAMA0A069Z3L2 
ProdomA0A069Z3L2 
UniProtKBA0A069XV02SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:KDU31426.1};
InterProA0A069XV02 
PFAMA0A069XV02 
ProdomA0A069XV02 
UniProtKBA0A024L6J3SubName: Full=Conserved inner membrane protein {ECO:0000313|EMBL:CDP72494.1};SubName: Full=Inner membrane protein YbcI {ECO:0000313|EMBL:KLX07809.1};SubName: Full=Inner membrane protein ybcI {ECO:0000
InterProA0A024L6J3 
PFAMA0A024L6J3 
ProdomA0A024L6J3 
UniProtKBT9ACM8SubName: Full=Inner membrane protein ybcI;
InterProT9ACM8 
PFAMT9ACM8 
ProdomT9ACM8 
UniProtKBT8XS23SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:EQX59737.1};
InterProT8XS23 
PFAMT8XS23 
ProdomT8XS23 
UniProtKBT6NGA5SubName: Full=Inner membrane protein ybcI;
InterProT6NGA5 
PFAMT6NGA5 
ProdomT6NGA5 
UniProtKBS1KEZ0SubName: Full=Inner membrane protein ybcI;
InterProS1KEZ0 
PFAMS1KEZ0 
ProdomS1KEZ0 
UniProtKBS1AK57SubName: Full=Inner membrane protein ybcI;
InterProS1AK57 
PFAMS1AK57 
ProdomS1AK57 
UniProtKBS0YNG1SubName: Full=Inner membrane protein ybcI;
InterProS0YNG1 
PFAMS0YNG1 
ProdomS0YNG1 
UniProtKBQ2MBQ2RecName: Full=Inner membrane protein YbcI;
InterProQ2MBQ2 
PFAMQ2MBQ2 
ProdomQ2MBQ2 
UniProtKBP45570RecName: Full=Inner membrane protein YbcI;
InterProP45570 
PFAMP45570 
ProdomP45570 
UniProtKBN4NT51SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:ENH04878.1};
InterProN4NT51 
PFAMN4NT51 
ProdomN4NT51 
UniProtKBN3NK39SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:END95909.1};
InterProN3NK39 
PFAMN3NK39 
ProdomN3NK39 
UniProtKBN2LSH6SubName: Full=Inner membrane protein ybcI;
InterProN2LSH6 
PFAMN2LSH6 
ProdomN2LSH6 
UniProtKBA0A080F316SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:KEN52404.1};
InterProA0A080F316 
PFAMA0A080F316 
ProdomA0A080F316 
UniProtKBA0A080FIH7SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:KEN59863.1};
InterProA0A080FIH7 
PFAMA0A080FIH7 
ProdomA0A080FIH7 
UniProtKBE9WQ00SubName: Full=GybcI;
InterProE9WQ00 
PFAME9WQ00 
ProdomE9WQ00 
UniProtKBE2WRJ2SubName: Full=Putative uncharacterized protein;
InterProE2WRJ2 
PFAME2WRJ2 
ProdomE2WRJ2 
UniProtKBD8BVP1SubName: Full=Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EFI89270.1};
InterProD8BVP1 
PFAMD8BVP1 
ProdomD8BVP1 
UniProtKBC9QPZ5SubName: Full=Conserved inner membrane protein;SubName: Full=Membrane-bound metal-dependent hydrolase;
InterProC9QPZ5 
PFAMC9QPZ5 
ProdomC9QPZ5 
UniProtKBC4ZUX5SubName: Full=Conserved inner membrane protein;
InterProC4ZUX5 
PFAMC4ZUX5 
ProdomC4ZUX5 
UniProtKBB2N8R7SubName: Full=Putative uncharacterized protein;
InterProB2N8R7 
PFAMB2N8R7 
ProdomB2N8R7 
UniProtKBB1XGC5SubName: Full=Conserved inner membrane protein;
InterProB1XGC5 
PFAMB1XGC5 
ProdomB1XGC5 
UniProtKBH0QBK9SubName: Full=Conserved inner membrane protein;
InterProH0QBK9 
PFAMH0QBK9 
ProdomH0QBK9 
UniProtKBG2F878SubName: Full=Inner membrane protein YbcI;
InterProG2F878 
PFAMG2F878 
ProdomG2F878 
UniProtKBF9R4K1SubName: Full=Inner membrane protein YbcI;
InterProF9R4K1 
PFAMF9R4K1 
ProdomF9R4K1 
UniProtKBA7ZXI2SubName: Full=Putative uncharacterized protein;
InterProA7ZXI2 
PFAMA7ZXI2 
ProdomA7ZXI2 
UniProtKBA0A0H3X5B3SubName: Full=Inner membrane protein {ECO:0000313|EMBL:AKM34123.1};
InterProA0A0H3X5B3 
PFAMA0A0H3X5B3 
ProdomA0A0H3X5B3 
UniProtKBA0A0G3HQY8SubName: Full=Inner membrane protein, DUF457 family protein {ECO:0000313|EMBL:AKK13557.1};
InterProA0A0G3HQY8 
PFAMA0A0G3HQY8 
ProdomA0A0G3HQY8 
UniProtKBA0A0E3H2E2SubName: Full=Inner membrane protein YbcI {ECO:0000313|EMBL:AKA89511.1};
InterProA0A0E3H2E2 
PFAMA0A0E3H2E2 
ProdomA0A0E3H2E2 
UniProtKBA0A0E1SYJ4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU62257.1};
InterProA0A0E1SYJ4 
PFAMA0A0E1SYJ4 
ProdomA0A0E1SYJ4 
UniProtKBA0A080IHI2SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:KEO28222.1};
InterProA0A080IHI2 
PFAMA0A080IHI2 
ProdomA0A080IHI2 
UniProtKBN2K5X1SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:ENA41778.1};
InterProN2K5X1 
PFAMN2K5X1 
ProdomN2K5X1 
UniProtKBM9LAH0SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:EMX90613.1};
InterProM9LAH0 
PFAMM9LAH0 
ProdomM9LAH0 
UniProtKBM9F3P2SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:EMX21820.1};
InterProM9F3P2 
PFAMM9F3P2 
ProdomM9F3P2 
UniProtKBS1EUN9SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:EOV82279.1};
InterProS1EUN9 
PFAMS1EUN9 
ProdomS1EUN9 
UniProtKBN2KDM3SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:ENA47710.1};
InterProN2KDM3 
PFAMN2KDM3 
ProdomN2KDM3 
UniProtKBS0UI88SubName: Full=Inner membrane protein ybcI;
InterProS0UI88 
PFAMS0UI88 
ProdomS0UI88 
UniProtKBN4PAQ8SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:ENH11033.1};
InterProN4PAQ8 
PFAMN4PAQ8 
ProdomN4PAQ8 
UniProtKBN1SQP2SubName: Full=Inner membrane protein ybcI;
InterProN1SQP2 
PFAMN1SQP2 
ProdomN1SQP2 
UniProtKBN4NGR4SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:ENH00139.1};
InterProN4NGR4 
PFAMN4NGR4 
ProdomN4NGR4 
UniProtKBN3FQ26SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:ENC93546.1};
InterProN3FQ26 
PFAMN3FQ26 
ProdomN3FQ26 
UniProtKBM2PXC8SubName: Full=Membrane-bound metal-dependent hydrolase;
InterProM2PXC8 
PFAMM2PXC8 
ProdomM2PXC8 
UniProtKBL3LQY1SubName: Full=Inner membrane protein ybcI;
InterProL3LQY1 
PFAML3LQY1 
ProdomL3LQY1 
UniProtKBI4TG30SubName: Full=Inner membrane protein ybcI;
InterProI4TG30 
PFAMI4TG30 
ProdomI4TG30 
UniProtKBT8DW86SubName: Full=Inner membrane protein ybcI;
InterProT8DW86 
PFAMT8DW86 
ProdomT8DW86 
UniProtKBT8MW01SubName: Full=Inner membrane protein ybcI;
InterProT8MW01 
PFAMT8MW01 
ProdomT8MW01 
UniProtKBV0A4M4SubName: Full=Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ESA88840.1};
InterProV0A4M4 
PFAMV0A4M4 
ProdomV0A4M4 
UniProtKBL4WZN8SubName: Full=Inner membrane protein ybcI;
InterProL4WZN8 
PFAML4WZN8 
ProdomL4WZN8 
UniProtKBL4A450SubName: Full=Inner membrane protein ybcI;
InterProL4A450 
PFAML4A450 
ProdomL4A450 
UniProtKBL3L0F6SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:ELE04688.1};
InterProL3L0F6 
PFAML3L0F6 
ProdomL3L0F6 
UniProtKBS1II56SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:EOW27517.1};
InterProS1II56 
PFAMS1II56 
ProdomS1II56 
UniProtKBK3KXC1SubName: Full=Inner membrane protein ybcI {ECO:0000313|EMBL:EKI55103.1};
InterProK3KXC1 
PFAMK3KXC1 
ProdomK3KXC1 
UniProtKBT9JWB9SubName: Full=Inner membrane protein ybcI;
InterProT9JWB9 
PFAMT9JWB9 
ProdomT9JWB9 
UniProtKBI2ZVU8SubName: Full=Putative membrane-bound metal-dependent hydrolase;
InterProI2ZVU8 
PFAMI2ZVU8 
ProdomI2ZVU8 
UniProtKBS1KN56SubName: Full=Inner membrane protein ybcI;
InterProS1KN56 
PFAMS1KN56 
ProdomS1KN56 
UniProtKBL8BVS9SubName: Full=Putative membrane-bound metal-dependent hydrolases;
InterProL8BVS9 
PFAML8BVS9 
ProdomL8BVS9 
UniProtKBN3GNR3SubName: Full=Inner membrane protein ybcI;
InterProN3GNR3 
PFAMN3GNR3 
ProdomN3GNR3 
UniProtKBI2PSC9SubName: Full=Inner membrane protein ybcI;
InterProI2PSC9 
PFAMI2PSC9 
ProdomI2PSC9 
UniProtKBH0QBK9SubName: Full=Conserved inner membrane protein;
InterProH0QBK9 
PFAMH0QBK9 
ProdomH0QBK9 
UniProtKBI4TG30SubName: Full=Inner membrane protein ybcI;
InterProI4TG30 
PFAMI4TG30 
ProdomI4TG30 
UniProtKBG2F878SubName: Full=Inner membrane protein YbcI;
InterProG2F878 
PFAMG2F878 
ProdomG2F878 
UniProtKBB2N8R7SubName: Full=Putative uncharacterized protein;
InterProB2N8R7 
PFAMB2N8R7 
ProdomB2N8R7 
UniProtKBC4ZUX5SubName: Full=Conserved inner membrane protein;
InterProC4ZUX5 
PFAMC4ZUX5 
ProdomC4ZUX5 
UniProtKBC9QPZ5SubName: Full=Conserved inner membrane protein;SubName: Full=Membrane-bound metal-dependent hydrolase;
InterProC9QPZ5 
PFAMC9QPZ5 
ProdomC9QPZ5 
UniProtKBB1XGC5SubName: Full=Conserved inner membrane protein;
InterProB1XGC5 
PFAMB1XGC5 
ProdomB1XGC5 
UniProtKBD8BVP1SubName: Full=Putative inner membrane protein;
InterProD8BVP1 
PFAMD8BVP1 
ProdomD8BVP1 
UniProtKBE2WRJ2SubName: Full=Putative uncharacterized protein;
InterProE2WRJ2 
PFAME2WRJ2 
ProdomE2WRJ2 
UniProtKBE9WQ00SubName: Full=GybcI;
InterProE9WQ00 
PFAME9WQ00 
ProdomE9WQ00 
UniProtKBI2ZVU8SubName: Full=Putative membrane-bound metal-dependent hydrolase;
InterProI2ZVU8 
PFAMI2ZVU8 
ProdomI2ZVU8 
UniProtKBF9R4K1SubName: Full=Inner membrane protein YbcI;
InterProF9R4K1 
PFAMF9R4K1 
ProdomF9R4K1 
UniProtKBA7ZXI2SubName: Full=Putative uncharacterized protein;
InterProA7ZXI2 
PFAMA7ZXI2 
ProdomA7ZXI2 
UniProtKBA0A8H9DIB5SubName: Full=Metal-dependent hydrolase {ECO:0000313|EMBL:EFY9879624.1}
InterProA0A8H9DIB5 
PFAMA0A8H9DIB5 
ProdomA0A8H9DIB5 
UniProtKBA0A1X3JK90SubName: Full=Inner membrane protein YbcI {ECO:0000313|EMBL:OSL15217.1}
InterProA0A1X3JK90 
PFAMA0A1X3JK90 
ProdomA0A1X3JK90 
UniProtKBA0A5Q3TIM3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QGL43915.1}
InterProA0A5Q3TIM3 
PFAMA0A5Q3TIM3 
ProdomA0A5Q3TIM3 
UniProtKBA0A6B8WYV8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QGU66829.1}
InterProA0A6B8WYV8 
PFAMA0A6B8WYV8 
ProdomA0A6B8WYV8 
UniProtKBQ2MBQ2Conserved inner membrane protein
InterProQ2MBQ2 
PFAMQ2MBQ2 
ProdomQ2MBQ2 
UniProtKBA0A7M3S3A4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABV04986.1}
InterProA0A7M3S3A4 
PFAMA0A7M3S3A4 
ProdomA0A7M3S3A4 
UniProtKBA0A7Z8FI34SubName: Full=Metal-dependent hydrolase {ECO:0000313|EMBL:TFB48111.1}
InterProA0A7Z8FI34 
PFAMA0A7Z8FI34 
ProdomA0A7Z8FI34 
UniProtKBA0A8A5H7I4SubName: Full=Metal-dependent hydrolase {ECO:0000313|EMBL:QTF25277.1}
InterProA0A8A5H7I4 
PFAMA0A8A5H7I4 
ProdomA0A8A5H7I4 
UniProtKBA0A8A5HG69SubName: Full=Metal-dependent hydrolase {ECO:0000313|EMBL:QTF29869.1}
InterProA0A8A5HG69 
PFAMA0A8A5HG69 
ProdomA0A8A5HG69 
UniProtKBA0A8F8DHN7SubName: Full=Metal-dependent hydrolase {ECO:0000313|EMBL:QXZ35899.1}
InterProA0A8F8DHN7 
PFAMA0A8F8DHN7 
ProdomA0A8F8DHN7 
UniProtKBA0A8F9H9B2SubName: Full=Metal-dependent hydrolase {ECO:0000313|EMBL:QYE24731.1}
InterProA0A8F9H9B2 
PFAMA0A8F9H9B2 
ProdomA0A8F9H9B2 
UniProtKBQ2MBQ2RecName: Full=Inner membrane protein YbcI;
InterProQ2MBQ2 
PFAMQ2MBQ2 
ProdomQ2MBQ2 
UniProtKBP45570RecName: Full=Inner membrane protein YbcI;
InterProP45570 
PFAMP45570 
ProdomP45570 
UniProtKBP45570.1YBCI_ECOLI RecName: Full=Inner membrane protein ybcI
InterProP45570.1 
PFAMP45570.1 
ProdomP45570.1 
RefSeqZP_00736901.1 COG1988: Predicted membrane-bound metal-dependent hydrolases [Escherichia coli 53638]
RefSeqZP_07186684.1 putative inner membrane protein [Escherichia coli MS 196-1]
RefSeqYP_002925604.1 conserved inner membrane protein [Escherichia coli BW2952]
RefSeqYP_001457369.1 hypothetical protein EcHS_A0602 [Escherichia coli HS]
RefSeqYP_001729430.1 inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_001174.1 conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110]
RefSeqNP_415060.1 inner membrane protein, DUF457 family [Escherichia coli str. K-12 substr. MG1655]
RefSeqZP_02999225.1 conserved hypothetical protein [Escherichia coli 53638]
GenPept75514646 COG1988: Predicted membrane-bound metal-dependent hydrolases [Escherichia coli 53638]
GenPept7467039F64784 ybcI protein - Escherichia coli
GenPept801067014inner membrane protein YbcI