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Sequence Information

Primary Database Link P45751.1
Original Database ID ref NP_417852.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yrfb_ecoli recname: full=uncharacterized
protein yrfb
Sequence Length 146

Dataset Information:

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Model Information

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Target Region59-142
Protein Length146
Template PDB Code1ewrA
Template Region194-279
Sequence Identity31%
E-Value0.039
GA3410.05
MPQS0.696642
z-DOPE1.58
TSVMod MethodMSALL
TSVMod RMSD14.558
TSVMod NO350.05
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1ewrcrystal structure of taq muts ; PFAM: PF00488 PF01624 PF05188 PF05190 PF05192 ; SCOP: 19073 32387 33744
DBALI1ewrA 
CATH3.30.420.110 Domain: 1ewrA01 Nucleotidyltransferase; domain 5 (43%)
JenaImageLibrary1ewr 
Target Sequence
UniProtKBG2F4A5SubName: Full=Putative uncharacterized protein;
InterProG2F4A5 
PFAMG2F4A5 
ProdomG2F4A5 
UniProtKBC9QWP0SubName: Full=Uncharacterized protein;
InterProC9QWP0 
PFAMC9QWP0 
ProdomC9QWP0 
UniProtKBC4ZUP8SubName: Full=Conserved membrane protein;
InterProC4ZUP8 
PFAMC4ZUP8 
ProdomC4ZUP8 
UniProtKBH0Q7D5SubName: Full=Conserved membrane protein;
InterProH0Q7D5 
PFAMH0Q7D5 
ProdomH0Q7D5 
UniProtKBA0A0H4I6A2SubName: Full=DNA utilization protein HofO {ECO:0000313|EMBL:AKO54564.1};
InterProA0A0H4I6A2 
PFAMA0A0H4I6A2 
ProdomA0A0H4I6A2 
UniProtKBM2NAA1SubName: Full=Uncharacterized protein;
InterProM2NAA1 
PFAMM2NAA1 
ProdomM2NAA1 
UniProtKBF9QZS0SubName: Full=Putative uncharacterized protein;
InterProF9QZS0 
PFAMF9QZS0 
ProdomF9QZS0 
UniProtKBB1X740SubName: Full=Conserved membrane protein;
InterProB1X740 
PFAMB1X740 
ProdomB1X740 
UniProtKBP45751RecName: Full=Putative DNA utilization protein HofO;
InterProP45751 
PFAMP45751 
ProdomP45751 
UniProtKBQ2M758RecName: Full=Putative DNA utilization protein HofO;
InterProQ2M758 
PFAMQ2M758 
ProdomQ2M758 
UniProtKBA0A0G3HUL0SubName: Full=Protein required for the utilization of DNA as a carbon source protein {ECO:0000313|EMBL:AKK14822.1};
InterProA0A0G3HUL0 
PFAMA0A0G3HUL0 
ProdomA0A0G3HUL0 
UniProtKBB1X740SubName: Full=Conserved membrane protein;
InterProB1X740 
PFAMB1X740 
ProdomB1X740 
UniProtKBA0A5Q3TDP3SubName: Full=DNA utilization protein HofO {ECO:0000313|EMBL:QGL42598.1}
InterProA0A5Q3TDP3 
PFAMA0A5Q3TDP3 
ProdomA0A5Q3TDP3 
UniProtKBA0A8G1CQY5SubName: Full=DNA utilization protein HofO {ECO:0000313|EMBL:QZA47457.1}
InterProA0A8G1CQY5 
PFAMA0A8G1CQY5 
ProdomA0A8G1CQY5 
UniProtKBA0A2S5ZT09SubName: Full=DNA utilization protein HofO {ECO:0000313|EMBL:EAC1715615.1}SubName: Full=Protein involved in utilization of DNA as a carbon source {ECO:0000313|EMBL:SVF17659.1}
InterProA0A2S5ZT09 
PFAMA0A2S5ZT09 
ProdomA0A2S5ZT09 
UniProtKBC4ZUP8SubName: Full=Conserved membrane protein;
InterProC4ZUP8 
PFAMC4ZUP8 
ProdomC4ZUP8 
UniProtKBF9QZS0SubName: Full=Putative uncharacterized protein;
InterProF9QZS0 
PFAMF9QZS0 
ProdomF9QZS0 
UniProtKBG2F4A5SubName: Full=Putative uncharacterized protein;
InterProG2F4A5 
PFAMG2F4A5 
ProdomG2F4A5 
UniProtKBC9QWP0SubName: Full=Putative uncharacterized protein hofO;
InterProC9QWP0 
PFAMC9QWP0 
ProdomC9QWP0 
UniProtKBH0Q7D5SubName: Full=Conserved membrane protein;
InterProH0Q7D5 
PFAMH0Q7D5 
ProdomH0Q7D5 
UniProtKBA0A8F9HBG7SubName: Full=DNA utilization protein HofO {ECO:0000313|EMBL:QYE26045.1}
InterProA0A8F9HBG7 
PFAMA0A8F9HBG7 
ProdomA0A8F9HBG7 
UniProtKBQ2M758Conserved membrane protein
InterProQ2M758 
PFAMQ2M758 
ProdomQ2M758 
UniProtKBA0A8F8DLI1SubName: Full=DNA utilization protein HofO {ECO:0000313|EMBL:QXZ37267.1}
InterProA0A8F8DLI1 
PFAMA0A8F8DLI1 
ProdomA0A8F8DLI1 
UniProtKBP45751RecName: Full=Putative DNA utilization protein HofO;
InterProP45751 
PFAMP45751 
ProdomP45751 
UniProtKBP45751.1YRFB_ECOLI RecName: Full=Uncharacterized protein yrfB
InterProP45751.1 
PFAMP45751.1 
ProdomP45751.1 
UniProtKBQ2M758RecName: Full=Putative DNA utilization protein HofO;
InterProQ2M758 
PFAMQ2M758 
ProdomQ2M758 
RefSeqYP_001732230.1 hypothetical protein ECDH10B_3568 [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_004397.1 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002928280.1 hypothetical protein BWG_3084 [Escherichia coli BW2952]
RefSeqNP_417852.1 protein required for the utilization of DNA as a carbon source [Escherichia coli str. K-12 substr. MG1655]
GenPept899724273DNA utilization protein HofO
GenPept899728628DNA utilization protein HofO
GenPept899733107DNA utilization protein HofO
GenPept932861479Type IV pilus biogenesis protein PilO
GenPept817576571DNA catabolic protein
GenPept359333560conserved membrane protein
GenPept89110617 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept85676648conserved membrane protein
GenPept827623388protein required for the utilization of DNA as a carbon source protein
GenPept606327ORF_f146; overlaps next ORF, downstream starts possible
GenPept664685726DNA utilization protein HofO
GenPept682120799DNA catabolic protein
GenPept687674660protein involved in utilization of DNA as a carbon source
GenPept687678487protein involved in utilization of DNA as a carbon source
GenPept730584575protein required for the utilization of DNA as a carbon source
GenPept731472303protein required for the utilization of DNA as a carbon source
GenPept732682799DNA utilization protein HofO
GenPept557273411hypothetical protein BN896_3084
GenPept549814734protein required for the utilization of DNA as a carbon source
GenPept16131270 protein required for the utilization of DNA as a carbon source [Escherichia coli str. K-12 substr. MG1655]
GenPept169890745conserved membrane protein
GenPept170082910 hypothetical protein ECDH10B_3568 [Escherichia coli str. K-12 substr. DH10B]
GenPept1789795DNA catabolic protein
GenPept238860254conserved membrane protein
GenPept238902484 hypothetical protein BWG_3084 [Escherichia coli BW2952]
GenPept260447588conserved hypothetical protein
GenPept315137969hypothetical protein ECDH1ME8569_3272
GenPept7465921D65134 hypothetical 16.8 kD protein in hofQ-mrcA intergenic region - Escherichia coli (strain K-12)
GenPept802136703protein required for the utilization of DNA as a carbon source
GenPept808723901DNA utilization protein HofO
GenPept808732218DNA utilization protein HofO
GenPept808736656DNA utilization protein HofO
GenPept817580713DNA catabolic protein
GenPept817584852DNA catabolic protein
GenPept817588993DNA catabolic protein
GenPept817593133DNA catabolic protein
GenPept827618839protein required for the utilization of DNA as a carbon source protein
GenPept808719531DNA utilization protein HofO
GenPept808715120DNA utilization protein HofO
GenPept808702024DNA utilization protein HofO
GenPept808706399DNA utilization protein HofO
GenPept1176859HOFO_ECOLI RecName: Full=Putative DNA utilization protein HofO
GenPept808710753DNA utilization protein HofO
GenBankACB04452.1 conserved membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenBankAAC76418.1 protein required for the utilization of DNA as a carbon source [Escherichia coli str. K-12 substr. MG1655]
GenBankACX38010.1 conserved hypothetical protein [Escherichia coli DH1]
GenBankAAA58190.1 ORF_f146; overlaps next ORF, downstream starts possible [Escherichia coli str. K-12 substr. MG1655]
GenBankACR62252.1 conserved membrane protein [Escherichia coli BW2952]