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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P45753.2
Original Database ID ref NP_417854.4
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation yrfd_ecoli recname: full=uncharacterized
protein yrfd
Sequence Length 259

Dataset Information:

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Model Information

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Target Region5-226
Protein Length259
Template PDB Code5eouB
Template Region10-246
Sequence Identity10%
E-Value0
GA3410.47
MPQS0.804943
z-DOPE0.46
TSVMod MethodMSALL
TSVMod RMSD7.406
TSVMod NO350.426
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB5eou
DBALI5eouB 
JenaImageLibrary5eou 
Target Sequence
UniProtKBA0A069XPI5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU31137.1};
InterProA0A069XPI5 
PFAMA0A069XPI5 
ProdomA0A069XPI5 
UniProtKBA0A079H1T2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY98535.1};
InterProA0A079H1T2 
PFAMA0A079H1T2 
ProdomA0A079H1T2 
UniProtKBA0A080EDI2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN45434.1};
InterProA0A080EDI2 
PFAMA0A080EDI2 
ProdomA0A080EDI2 
UniProtKBA0A080ETF4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN52507.1};
InterProA0A080ETF4 
PFAMA0A080ETF4 
ProdomA0A080ETF4 
UniProtKBA0A080GLZ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN87339.1};
InterProA0A080GLZ2 
PFAMA0A080GLZ2 
ProdomA0A080GLZ2 
UniProtKBA0A080HXZ6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO21781.1};
InterProA0A080HXZ6 
PFAMA0A080HXZ6 
ProdomA0A080HXZ6 
UniProtKBA0A0E1T160SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU65548.1};
InterProA0A0E1T160 
PFAMA0A0E1T160 
ProdomA0A0E1T160 
UniProtKBA0A0E3KIS6SubName: Full=Putative DNA utilization protein HofM {ECO:0000313|EMBL:AKA92574.1};
InterProA0A0E3KIS6 
PFAMA0A0E3KIS6 
ProdomA0A0E3KIS6 
UniProtKBA0A0G3I0N9SubName: Full=Protein required for the utilization of DNA as a carbon source, pilus assembly protein-like protein {ECO:0000313|EMBL:AKK19124.1};
InterProA0A0G3I0N9 
PFAMA0A0G3I0N9 
ProdomA0A0G3I0N9 
UniProtKBL2YY93SubName: Full=Pilus assembly protein;
InterProL2YY93 
PFAML2YY93 
ProdomL2YY93 
UniProtKBL3I0R1SubName: Full=Pilus assembly protein {ECO:0000313|EMBL:ELD67411.1};
InterProL3I0R1 
PFAML3I0R1 
ProdomL3I0R1 
UniProtKBA0A079FZI7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY68657.1};
InterProA0A079FZI7 
PFAMA0A079FZI7 
ProdomA0A079FZI7 
UniProtKBA0A079FCW5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY54997.1};
InterProA0A079FCW5 
PFAMA0A079FCW5 
ProdomA0A079FCW5 
UniProtKBA0A079DK05SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY23161.1};
InterProA0A079DK05 
PFAMA0A079DK05 
ProdomA0A079DK05 
UniProtKBA0A069Z784SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU53179.1};
InterProA0A069Z784 
PFAMA0A069Z784 
ProdomA0A069Z784 
UniProtKBA0A070SN83SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX19462.1};
InterProA0A070SN83 
PFAMA0A070SN83 
ProdomA0A070SN83 
UniProtKBA0A070YDH1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX88514.1};
InterProA0A070YDH1 
PFAMA0A070YDH1 
ProdomA0A070YDH1 
UniProtKBA0A071AU41SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY65788.1};
InterProA0A071AU41 
PFAMA0A071AU41 
ProdomA0A071AU41 
UniProtKBA0A071C3R2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY91391.1};
InterProA0A071C3R2 
PFAMA0A071C3R2 
ProdomA0A071C3R2 
UniProtKBA0A071CKT1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ19726.1};
InterProA0A071CKT1 
PFAMA0A071CKT1 
ProdomA0A071CKT1 
UniProtKBA0A071DJP7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ40521.1};
InterProA0A071DJP7 
PFAMA0A071DJP7 
ProdomA0A071DJP7 
UniProtKBA0A073GK95SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ65984.1};
InterProA0A073GK95 
PFAMA0A073GK95 
ProdomA0A073GK95 
UniProtKBA0A073TE77SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL25440.1};
InterProA0A073TE77 
PFAMA0A073TE77 
ProdomA0A073TE77 
UniProtKBA0A074HLQ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN95091.1};
InterProA0A074HLQ2 
PFAMA0A074HLQ2 
ProdomA0A074HLQ2 
UniProtKBL3KCW0SubName: Full=Pilus assembly protein {ECO:0000313|EMBL:ELD96126.1};
InterProL3KCW0 
PFAML3KCW0 
ProdomL3KCW0 
UniProtKBL3LYT5SubName: Full=Pilus assembly protein;
InterProL3LYT5 
PFAML3LYT5 
ProdomL3LYT5 
UniProtKBM9F2N1SubName: Full=Uncharacterized protein;
InterProM9F2N1 
PFAMM9F2N1 
ProdomM9F2N1 
UniProtKBM9K7T4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMX82870.1};
InterProM9K7T4 
PFAMM9K7T4 
ProdomM9K7T4 
UniProtKBN1SFX0SubName: Full=Uncharacterized protein;
InterProN1SFX0 
PFAMN1SFX0 
ProdomN1SFX0 
UniProtKBB2N8Y6SubName: Full=Putative uncharacterized protein;
InterProB2N8Y6 
PFAMB2N8Y6 
ProdomB2N8Y6 
UniProtKBN2GF87SubName: Full=Uncharacterized protein;
InterProN2GF87 
PFAMN2GF87 
ProdomN2GF87 
UniProtKBC4ZUQ0SubName: Full=Predicted pilus assembly protein;
InterProC4ZUQ0 
PFAMC4ZUQ0 
ProdomC4ZUQ0 
UniProtKBK3HSI2SubName: Full=Uncharacterized protein;
InterProK3HSI2 
PFAMK3HSI2 
ProdomK3HSI2 
UniProtKBI4TNQ0SubName: Full=Putative pilus assembly protein;
InterProI4TNQ0 
PFAMI4TNQ0 
ProdomI4TNQ0 
UniProtKBN2I9S8SubName: Full=Uncharacterized protein;
InterProN2I9S8 
PFAMN2I9S8 
ProdomN2I9S8 
UniProtKBB1X742SubName: Full=Predicted pilus assembly protein;
InterProB1X742 
PFAMB1X742 
ProdomB1X742 
UniProtKBM9D621SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMW92771.1};
InterProM9D621 
PFAMM9D621 
ProdomM9D621 
UniProtKBM9AFM8SubName: Full=Uncharacterized protein;
InterProM9AFM8 
PFAMM9AFM8 
ProdomM9AFM8 
UniProtKBM8ZN84SubName: Full=Uncharacterized protein;
InterProM8ZN84 
PFAMM8ZN84 
ProdomM8ZN84 
UniProtKBL3R9G1SubName: Full=Pilus assembly protein;
InterProL3R9G1 
PFAML3R9G1 
ProdomL3R9G1 
UniProtKBL3TI64SubName: Full=Pilus assembly protein;
InterProL3TI64 
PFAML3TI64 
ProdomL3TI64 
UniProtKBL4K6U2SubName: Full=Pilus assembly protein;
InterProL4K6U2 
PFAML4K6U2 
ProdomL4K6U2 
UniProtKBL4NSU4SubName: Full=Pilus assembly protein;
InterProL4NSU4 
PFAML4NSU4 
ProdomL4NSU4 
UniProtKBL4W868SubName: Full=Pilus assembly protein;
InterProL4W868 
PFAML4W868 
ProdomL4W868 
UniProtKBL8C0Y3SubName: Full=Type IV pilus biogenesis protein PilM;
InterProL8C0Y3 
PFAML8C0Y3 
ProdomL8C0Y3 
UniProtKBM2NP15SubName: Full=Putative pilus assembly protein;
InterProM2NP15 
PFAMM2NP15 
ProdomM2NP15 
UniProtKBM7V166SubName: Full=Putative pilus assembly protein;
InterProM7V166 
PFAMM7V166 
ProdomM7V166 
UniProtKBM8SKR3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMV53426.1};
InterProM8SKR3 
PFAMM8SKR3 
ProdomM8SKR3 
UniProtKBM8Z6R2SubName: Full=Uncharacterized protein;
InterProM8Z6R2 
PFAMM8Z6R2 
ProdomM8Z6R2 
UniProtKBN2JNF2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENA37726.1};
InterProN2JNF2 
PFAMN2JNF2 
ProdomN2JNF2 
UniProtKBA0A037YD74SubName: Full=DNA utilization protein HofM {ECO:0000313|EMBL:AJB53414.1};SubName: Full=Pilus assembly protein {ECO:0000313|EMBL:KLW96818.1};SubName: Full=Putative periplasmic protein {ECO:0000313|EMBL
InterProA0A037YD74 
PFAMA0A037YD74 
ProdomA0A037YD74 
UniProtKBL3WNY1SubName: Full=Pilus assembly protein;
InterProL3WNY1 
PFAML3WNY1 
ProdomL3WNY1 
UniProtKBN2LD97SubName: Full=Uncharacterized protein;
InterProN2LD97 
PFAMN2LD97 
ProdomN2LD97 
UniProtKBK3J9T6SubName: Full=Uncharacterized protein;
InterProK3J9T6 
PFAMK3J9T6 
ProdomK3J9T6 
UniProtKBK5HCX5SubName: Full=Uncharacterized protein;
InterProK5HCX5 
PFAMK5HCX5 
ProdomK5HCX5 
UniProtKBL3QNQ2SubName: Full=Pilus assembly protein;
InterProL3QNQ2 
PFAML3QNQ2 
ProdomL3QNQ2 
UniProtKBG2B0N3SubName: Full=Putative uncharacterized protein;
InterProG2B0N3 
PFAMG2B0N3 
ProdomG2B0N3 
UniProtKBM7VEB8SubName: Full=Putative pilus assembly protein;
InterProM7VEB8 
PFAMM7VEB8 
ProdomM7VEB8 
UniProtKBH0Q7D7SubName: Full=Predicted pilus assembly protein;
InterProH0Q7D7 
PFAMH0Q7D7 
ProdomH0Q7D7 
UniProtKBH4V707SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV52798.1};
InterProH4V707 
PFAMH4V707 
ProdomH4V707 
UniProtKBN2FSX2SubName: Full=Uncharacterized protein;
InterProN2FSX2 
PFAMN2FSX2 
ProdomN2FSX2 
UniProtKBI2PIV6SubName: Full=Uncharacterized protein;
InterProI2PIV6 
PFAMI2PIV6 
ProdomI2PIV6 
UniProtKBI2YQ35SubName: Full=Uncharacterized protein;
InterProI2YQ35 
PFAMI2YQ35 
ProdomI2YQ35 
UniProtKBI2X677SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EII44497.1};
InterProI2X677 
PFAMI2X677 
ProdomI2X677 
UniProtKBI2I3B4SubName: Full=Putative pilus assembly protein;
InterProI2I3B4 
PFAMI2I3B4 
ProdomI2I3B4 
UniProtKBM9H1S5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMX29041.1};
InterProM9H1S5 
PFAMM9H1S5 
ProdomM9H1S5 
UniProtKBI0ZX68SubName: Full=Uncharacterized protein;
InterProI0ZX68 
PFAMI0ZX68 
ProdomI0ZX68 
UniProtKBC9QWN8SubName: Full=HofM protein;Flags: Precursor;
InterProC9QWN8 
PFAMC9QWN8 
ProdomC9QWN8 
UniProtKBM9G582SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EMX17750.1};
InterProM9G582 
PFAMM9G582 
ProdomM9G582 
UniProtKBN2HJX6SubName: Full=Uncharacterized protein;
InterProN2HJX6 
PFAMN2HJX6 
ProdomN2HJX6 
UniProtKBN2MPF8SubName: Full=Uncharacterized protein;
InterProN2MPF8 
PFAMN2MPF8 
ProdomN2MPF8 
UniProtKBD8BVY6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFI89178.1};
InterProD8BVY6 
PFAMD8BVY6 
ProdomD8BVY6 
UniProtKBF9QZS2SubName: Full=Putative pilus assembly protein;
InterProF9QZS2 
PFAMF9QZS2 
ProdomF9QZS2 
UniProtKBG2CRD4SubName: Full=Putative uncharacterized protein;
InterProG2CRD4 
PFAMG2CRD4 
ProdomG2CRD4 
UniProtKBL3V936SubName: Full=Pilus assembly protein;
InterProL3V936 
PFAML3V936 
ProdomL3V936 
UniProtKBI2QWC2SubName: Full=Uncharacterized protein;
InterProI2QWC2 
PFAMI2QWC2 
ProdomI2QWC2 
UniProtKBN2MTF1SubName: Full=Uncharacterized protein;
InterProN2MTF1 
PFAMN2MTF1 
ProdomN2MTF1 
UniProtKBG2F4A3SubName: Full=Putative pilus assembly protein;
InterProG2F4A3 
PFAMG2F4A3 
ProdomG2F4A3 
UniProtKBL3WCA7SubName: Full=Pilus assembly protein;
InterProL3WCA7 
PFAML3WCA7 
ProdomL3WCA7 
UniProtKBM9C283SubName: Full=Uncharacterized protein;
InterProM9C283 
PFAMM9C283 
ProdomM9C283 
UniProtKBH4UQA6SubName: Full=Putative periplasmic protein {ECO:0000313|EMBL:EHV53881.1};
InterProH4UQA6 
PFAMH4UQA6 
ProdomH4UQA6 
UniProtKBN2DDN8SubName: Full=Uncharacterized protein;
InterProN2DDN8 
PFAMN2DDN8 
ProdomN2DDN8 
UniProtKBH4VM78SubName: Full=Putative periplasmic protein;
InterProH4VM78 
PFAMH4VM78 
ProdomH4VM78 
UniProtKBH4W2E8SubName: Full=Putative periplasmic protein;
InterProH4W2E8 
PFAMH4W2E8 
ProdomH4W2E8 
UniProtKBH4WGR5SubName: Full=Uncharacterized protein;
InterProH4WGR5 
PFAMH4WGR5 
ProdomH4WGR5 
UniProtKBN2IMV1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENA28119.1};
InterProN2IMV1 
PFAMN2IMV1 
ProdomN2IMV1 
UniProtKBN2KT41SubName: Full=Uncharacterized protein;
InterProN2KT41 
PFAMN2KT41 
ProdomN2KT41 
UniProtKBG2BEU3SubName: Full=Putative uncharacterized protein;
InterProG2BEU3 
PFAMG2BEU3 
ProdomG2BEU3 
UniProtKBL3ZKJ8SubName: Full=Pilus assembly protein;
InterProL3ZKJ8 
PFAML3ZKJ8 
ProdomL3ZKJ8 
UniProtKBK5BTZ8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EKJ82114.1};
InterProK5BTZ8 
PFAMK5BTZ8 
ProdomK5BTZ8 
UniProtKBI2Y8M0SubName: Full=Uncharacterized protein;
InterProI2Y8M0 
PFAMI2Y8M0 
ProdomI2Y8M0 
UniProtKBI2ZUC8SubName: Full=Uncharacterized protein;
InterProI2ZUC8 
PFAMI2ZUC8 
ProdomI2ZUC8 
UniProtKBI4J6G9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF84828.1};
InterProI4J6G9 
PFAMI4J6G9 
ProdomI4J6G9 
UniProtKBN2ER48SubName: Full=Uncharacterized protein;
InterProN2ER48 
PFAMN2ER48 
ProdomN2ER48 
UniProtKBE6B0I6SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFU99597.1};
InterProE6B0I6 
PFAME6B0I6 
ProdomE6B0I6 
UniProtKBK3HK99SubName: Full=Uncharacterized protein;
InterProK3HK99 
PFAMK3HK99 
ProdomK3HK99 
UniProtKBE9WME7SubName: Full=YrfD protein;
InterProE9WME7 
PFAME9WME7 
ProdomE9WME7 
UniProtKBK5GE71SubName: Full=Uncharacterized protein;
InterProK5GE71 
PFAMK5GE71 
ProdomK5GE71 
UniProtKBG0F617SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEJ58792.1};
InterProG0F617 
PFAMG0F617 
ProdomG0F617 
UniProtKBN2JV22SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ENA43017.1};
InterProN2JV22 
PFAMN2JV22 
ProdomN2JV22