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Sequence Information

Primary Database Link P45771
Original Database ID ref YP_026210.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=uncharacterized
protein yrdd;
Sequence Length 180

Dataset Information:

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Model Information

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Target Region15-135
Protein Length180
Template PDB Code4rulA
Template Region599-737
Sequence Identity33%
E-Value0.00013
GA3410.82
MPQS0.744222
z-DOPE0.89
TSVMod MethodMSALL
TSVMod RMSD8.235
TSVMod NO350.313
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4rul
DBALI4rulA 
JenaImageLibrary4rul 
Target Sequence
UniProtKBI5ZE76SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5ZE76 
PFAMI5ZE76 
ProdomI5ZE76 
UniProtKBE8IS77SubName: Full=Putative DNA topoisomerase;
InterProE8IS77 
PFAME8IS77 
ProdomE8IS77 
UniProtKBE9WMR1SubName: Full=Topoisomerase DNA binding C4 zinc finger;
InterProE9WMR1 
PFAME9WMR1 
ProdomE9WMR1 
UniProtKBE8I058SubName: Full=Putative DNA topoisomerase;
InterProE8I058 
PFAME8I058 
ProdomE8I058 
UniProtKBE8HLJ0SubName: Full=Putative DNA topoisomerase;
InterProE8HLJ0 
PFAME8HLJ0 
ProdomE8HLJ0 
UniProtKBF9R475SubName: Full=Putative DNA topoisomerase;
InterProF9R475 
PFAMF9R475 
ProdomF9R475 
UniProtKBF1XQJ7SubName: Full=Putative DNA topoisomerase;
InterProF1XQJ7 
PFAMF1XQJ7 
ProdomF1XQJ7 
UniProtKBE9YJI0SubName: Full=Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:EGB65361.1};
InterProE9YJI0 
PFAME9YJI0 
ProdomE9YJI0 
UniProtKBH4R4X3SubName: Full=Topoisomerase DNA binding C4 zinc finger family protein;
InterProH4R4X3 
PFAMH4R4X3 
ProdomH4R4X3 
UniProtKBH4PUG4SubName: Full=Topoisomerase DNA binding C4 zinc finger family protein;
InterProH4PUG4 
PFAMH4PUG4 
ProdomH4PUG4 
UniProtKBI2HYE1SubName: Full=DNA topoisomerase;
InterProI2HYE1 
PFAMI2HYE1 
ProdomI2HYE1 
UniProtKBA0A0H3PTU1SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EDU92480.1};
InterProA0A0H3PTU1 
PFAMA0A0H3PTU1 
ProdomA0A0H3PTU1 
UniProtKBA0A0G3I1Z7SubName: Full=Putative DNA topoisomerase protein {ECO:0000313|EMBL:AKK19025.1};
InterProA0A0G3I1Z7 
PFAMA0A0G3I1Z7 
ProdomA0A0G3I1Z7 
UniProtKBE3PKW7SubName: Full=Putative DNA topoisomerase {ECO:0000313|EMBL:CBJ03036.1};
InterProE3PKW7 
PFAME3PKW7 
ProdomE3PKW7 
UniProtKBC6UFN3SubName: Full=Predicted DNA topoisomerase;
InterProC6UFN3 
PFAMC6UFN3 
ProdomC6UFN3 
UniProtKBC6UV70SubName: Full=Predicted DNA topoisomerase;
InterProC6UV70 
PFAMC6UV70 
ProdomC6UV70 
UniProtKBK2ZE59SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProK2ZE59 
PFAMK2ZE59 
ProdomK2ZE59 
UniProtKBD7ZZW9SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EFK23553.1};
InterProD7ZZW9 
PFAMD7ZZW9 
ProdomD7ZZW9 
UniProtKBK2YF71SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProK2YF71 
PFAMK2YF71 
ProdomK2YF71 
UniProtKBK3A9K5SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProK3A9K5 
PFAMK3A9K5 
ProdomK3A9K5 
UniProtKBD8B031SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EFJ67549.1};
InterProD8B031 
PFAMD8B031 
ProdomD8B031 
UniProtKBK3BAG1SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProK3BAG1 
PFAMK3BAG1 
ProdomK3BAG1 
UniProtKBE2JTY3SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProE2JTY3 
PFAME2JTY3 
ProdomE2JTY3 
UniProtKBE2K7X7SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProE2K7X7 
PFAME2K7X7 
ProdomE2K7X7 
UniProtKBH4MEB6SubName: Full=Topoisomerase DNA binding C4 zinc finger family protein;
InterProH4MEB6 
PFAMH4MEB6 
ProdomH4MEB6 
UniProtKBE9Y6S2SubName: Full=Topoisomerase DNA binding C4 zinc finger;
InterProE9Y6S2 
PFAME9Y6S2 
ProdomE9Y6S2 
UniProtKBI5PLQ2SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5PLQ2 
PFAMI5PLQ2 
ProdomI5PLQ2 
UniProtKBB3APD3SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB3APD3 
PFAMB3APD3 
ProdomB3APD3 
UniProtKBI5IVW0SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5IVW0 
PFAMI5IVW0 
ProdomI5IVW0 
UniProtKBI2QWN3SubName: Full=Uncharacterized protein;
InterProI2QWN3 
PFAMI2QWN3 
ProdomI2QWN3 
UniProtKBB3BEP7SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB3BEP7 
PFAMB3BEP7 
ProdomB3BEP7 
UniProtKBB5YT03SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB5YT03 
PFAMB5YT03 
ProdomB5YT03 
UniProtKBI5WPS3SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5WPS3 
PFAMI5WPS3 
ProdomI5WPS3 
UniProtKBI5WAM2SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5WAM2 
PFAMI5WAM2 
ProdomI5WAM2 
UniProtKBC1NEQ0SubName: Full=Putative uncharacterized protein;
InterProC1NEQ0 
PFAMC1NEQ0 
ProdomC1NEQ0 
UniProtKBC4ZUD8SubName: Full=Predicted DNA topoisomerase;
InterProC4ZUD8 
PFAMC4ZUD8 
ProdomC4ZUD8 
UniProtKBB2PSM0SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB2PSM0 
PFAMB2PSM0 
ProdomB2PSM0 
UniProtKBB2PCZ2SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB2PCZ2 
PFAMB2PCZ2 
ProdomB2PCZ2 
UniProtKBI5JXF6SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5JXF6 
PFAMI5JXF6 
ProdomI5JXF6 
UniProtKBI5DF48SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5DF48 
PFAMI5DF48 
ProdomI5DF48 
UniProtKBI5DJR2SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5DJR2 
PFAMI5DJR2 
ProdomI5DJR2 
UniProtKBI4J657SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF84716.1};
InterProI4J657 
PFAMI4J657 
ProdomI4J657 
UniProtKBI5GDL0SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5GDL0 
PFAMI5GDL0 
ProdomI5GDL0 
UniProtKBI5F3V7SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5F3V7 
PFAMI5F3V7 
ProdomI5F3V7 
UniProtKBI5HUZ2SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5HUZ2 
PFAMI5HUZ2 
ProdomI5HUZ2 
UniProtKBA8A588SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProA8A588 
PFAMA8A588 
ProdomA8A588 
UniProtKBE2KL74SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProE2KL74 
PFAME2KL74 
ProdomE2KL74 
UniProtKBB1IQ16SubName: Full=DNA topoisomerase type IA zn finger domain protein;
InterProB1IQ16 
PFAMB1IQ16 
ProdomB1IQ16 
UniProtKBI5L839SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5L839 
PFAMI5L839 
ProdomI5L839 
UniProtKBI5XKT1SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5XKT1 
PFAMI5XKT1 
ProdomI5XKT1 
UniProtKBC5W9L4SubName: Full=DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:ACT27539.1};
InterProC5W9L4 
PFAMC5W9L4 
ProdomC5W9L4 
UniProtKBA0A027Y1E0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD80184.1};
InterProA0A027Y1E0 
PFAMA0A027Y1E0 
ProdomA0A027Y1E0 
UniProtKBK2ZN65SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProK2ZN65 
PFAMK2ZN65 
ProdomK2ZN65 
UniProtKBA0A0E1M248SubName: Full=Putative DNA topoisomerase {ECO:0000313|EMBL:AJF58091.1};
InterProA0A0E1M248 
PFAMA0A0E1M248 
ProdomA0A0E1M248 
UniProtKBE9X0Y8SubName: Full=Topoisomerase DNA binding C4 zinc finger;
InterProE9X0Y8 
PFAME9X0Y8 
ProdomE9X0Y8 
UniProtKBH1EDA7SubName: Full=Putative uncharacterized protein;
InterProH1EDA7 
PFAMH1EDA7 
ProdomH1EDA7 
UniProtKBI2PIJ4SubName: Full=Uncharacterized protein;
InterProI2PIJ4 
PFAMI2PIJ4 
ProdomI2PIJ4 
UniProtKBI5EVL8SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5EVL8 
PFAMI5EVL8 
ProdomI5EVL8 
UniProtKBI5HWY1SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5HWY1 
PFAMI5HWY1 
ProdomI5HWY1 
UniProtKBI5MS80SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5MS80 
PFAMI5MS80 
ProdomI5MS80 
UniProtKBB3AEA5SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB3AEA5 
PFAMB3AEA5 
ProdomB3AEA5 
UniProtKBB3XK84SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB3XK84 
PFAMB3XK84 
ProdomB3XK84 
UniProtKBI5ZG96SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5ZG96 
PFAMI5ZG96 
ProdomI5ZG96 
UniProtKBI5TWB3SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5TWB3 
PFAMI5TWB3 
ProdomI5TWB3 
UniProtKBA0A029LDD9SubName: Full=Topoisomerase DNA binding C4 zinc finger family protein {ECO:0000313|EMBL:EZJ82996.1};
InterProA0A029LDD9 
PFAMA0A029LDD9 
ProdomA0A029LDD9 
UniProtKBI5SSZ7SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5SSZ7 
PFAMI5SSZ7 
ProdomI5SSZ7 
UniProtKBA0A037YCM2SubName: Full=DNA topoisomerase {ECO:0000313|EMBL:KLW96706.1};SubName: Full=Predicted DNA topoisomerase {ECO:0000313|EMBL:CDP70377.1};SubName: Full=Putative DNA topoisomerase {ECO:0000313|EMBL:KGM7180
InterProA0A037YCM2 
PFAMA0A037YCM2 
ProdomA0A037YCM2 
UniProtKBI4TPS9SubName: Full=Putative DNA topoisomerase;
InterProI4TPS9 
PFAMI4TPS9 
ProdomI4TPS9 
UniProtKBB3C4T4SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB3C4T4 
PFAMB3C4T4 
ProdomB3C4T4 
UniProtKBC9QXJ9SubName: Full=DNA topoisomerase type IA zn finger domain protein;SubName: Full=Predicted DNA topoisomerase;
InterProC9QXJ9 
PFAMC9QXJ9 
ProdomC9QXJ9 
UniProtKBA0A080I5F9SubName: Full=Topoisomerase DNA binding C4 zinc finger family protein {ECO:0000313|EMBL:KEO21958.1};
InterProA0A080I5F9 
PFAMA0A080I5F9 
ProdomA0A080I5F9 
UniProtKBH0QE27SubName: Full=Predicted DNA topoisomerase;
InterProH0QE27 
PFAMH0QE27 
ProdomH0QE27 
UniProtKBI5EVG3SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5EVG3 
PFAMI5EVG3 
ProdomI5EVG3 
UniProtKBB1X6D6SubName: Full=Predicted DNA topoisomerase;
InterProB1X6D6 
PFAMB1X6D6 
ProdomB1X6D6 
UniProtKBI5VCG3SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5VCG3 
PFAMI5VCG3 
ProdomI5VCG3 
UniProtKBC6EGI3SubName: Full=DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:ACT27539.1};
InterProC6EGI3 
PFAMC6EGI3 
ProdomC6EGI3 
UniProtKBI5QY41SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5QY41 
PFAMI5QY41 
ProdomI5QY41 
UniProtKBI5DK95SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5DK95 
PFAMI5DK95 
ProdomI5DK95 
UniProtKBI5GNG7SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5GNG7 
PFAMI5GNG7 
ProdomI5GNG7 
UniProtKBI5HII1SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5HII1 
PFAMI5HII1 
ProdomI5HII1 
UniProtKBI5M6Z5SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5M6Z5 
PFAMI5M6Z5 
ProdomI5M6Z5 
UniProtKBB2NZ02SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB2NZ02 
PFAMB2NZ02 
ProdomB2NZ02 
UniProtKBI5MVK1SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5MVK1 
PFAMI5MVK1 
ProdomI5MVK1 
UniProtKBI5MZX5SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5MZX5 
PFAMI5MZX5 
ProdomI5MZX5 
UniProtKBB3B9X8SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB3B9X8 
PFAMB3B9X8 
ProdomB3B9X8 
UniProtKBI5TU23SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5TU23 
PFAMI5TU23 
ProdomI5TU23 
UniProtKBB6ZU70SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein;
InterProB6ZU70 
PFAMB6ZU70 
ProdomB6ZU70 
UniProtKBE8H7I5SubName: Full=Putative DNA topoisomerase;
InterProE8H7I5 
PFAME8H7I5 
ProdomE8H7I5 
UniProtKBH9UXG1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFG42204.1};
InterProH9UXG1 
PFAMH9UXG1 
ProdomH9UXG1 
UniProtKBH6MGU1SubName: Full=DNA topoisomerase;
InterProH6MGU1 
PFAMH6MGU1 
ProdomH6MGU1 
UniProtKBD3QTC3SubName: Full=Predicted DNA topoisomerase {ECO:0000313|EMBL:ADD58476.1};
InterProD3QTC3 
PFAMD3QTC3 
ProdomD3QTC3 
UniProtKBD8AHE1SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EFK17431.1};
InterProD8AHE1 
PFAMD8AHE1 
ProdomD8AHE1 
UniProtKBD8BU36SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein {ECO:0000313|EMBL:EFI89826.1};
InterProD8BU36 
PFAMD8BU36 
ProdomD8BU36 
UniProtKBK2Y249SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProK2Y249 
PFAMK2Y249 
ProdomK2Y249 
UniProtKBA0A0E3KIP8SubName: Full=Uncharacterized protein YrdD {ECO:0000313|EMBL:AKA92462.1};
InterProA0A0E3KIP8 
PFAMA0A0E3KIP8 
ProdomA0A0E3KIP8 
UniProtKBA0A0H3XAH4SubName: Full=Putative DNA topoisomerase {ECO:0000313|EMBL:AKM36825.1};
InterProA0A0H3XAH4 
PFAMA0A0H3XAH4 
ProdomA0A0H3XAH4 
UniProtKBE8J794SubName: Full=Putative DNA topoisomerase;
InterProE8J794 
PFAME8J794 
ProdomE8J794 
UniProtKBF4SQ10SubName: Full=Putative DNA topoisomerase {ECO:0000313|EMBL:EGI08499.1};
InterProF4SQ10 
PFAMF4SQ10 
ProdomF4SQ10 
UniProtKBG2F831SubName: Full=Putative DNA topoisomerase;
InterProG2F831 
PFAMG2F831 
ProdomG2F831 
UniProtKBI5SK35SubName: Full=DNA topoisomerase TopA;EC=5.99.1.2;
InterProI5SK35 
PFAMI5SK35 
ProdomI5SK35