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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P46125.2
Original Database ID ref NP_416467.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation yedi_ecoli recname: full=inner
membrane protein yedi
Sequence Length 305

Dataset Information:

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Model Information

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Target Region225-287
Protein Length305
Template PDB Code4mamA
Template Region231-293
Sequence Identity33%
E-Value0.92
GA3410.13
MPQS0.209957
z-DOPE2.73
TSVMod MethodMSALL
TSVMod RMSD13.487
TSVMod NO350.052
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4mam
DBALI4mamA 
JenaImageLibrary4mam 
Target Sequence
UniProtKBP76332RecName: Full=Inner membrane protein YedI;
InterProP76332 
PFAMP76332 
ProdomP76332 
UniProtKBC6EBA8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT28740.1};
InterProC6EBA8 
PFAMC6EBA8 
ProdomC6EBA8 
UniProtKBC9QSM0SubName: Full=Uncharacterized protein;
InterProC9QSM0 
PFAMC9QSM0 
ProdomC9QSM0 
UniProtKBD6I948SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF05895.2};
InterProD6I948 
PFAMD6I948 
ProdomD6I948 
UniProtKBB1X6B1SubName: Full=Conserved inner membrane protein;
InterProB1X6B1 
PFAMB1X6B1 
ProdomB1X6B1 
UniProtKBG2EY52SubName: Full=Putative uncharacterized protein;
InterProG2EY52 
PFAMG2EY52 
ProdomG2EY52 
UniProtKBH0QD97SubName: Full=Conserved inner membrane protein;
InterProH0QD97 
PFAMH0QD97 
ProdomH0QD97 
UniProtKBH1EC78SubName: Full=Inner membrane protein yedI;
InterProH1EC78 
PFAMH1EC78 
ProdomH1EC78 
UniProtKBC4ZQN1SubName: Full=Conserved inner membrane protein;
InterProC4ZQN1 
PFAMC4ZQN1 
ProdomC4ZQN1 
UniProtKBA0A0G3HI27SubName: Full=Conserved inner membrane protein {ECO:0000313|EMBL:AKK12425.1};
InterProA0A0G3HI27 
PFAMA0A0G3HI27 
ProdomA0A0G3HI27 
UniProtKBM2MYB5SubName: Full=Uncharacterized protein;
InterProM2MYB5 
PFAMM2MYB5 
ProdomM2MYB5 
UniProtKBA0A094VPD4SubName: Full=Inner membrane protein YedI {ECO:0000313|EMBL:KGM70057.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKO57501.1};
InterProA0A094VPD4 
PFAMA0A094VPD4 
ProdomA0A094VPD4 
UniProtKBP46125RecName: Full=Inner membrane protein YedI;
InterProP46125 
PFAMP46125 
ProdomP46125 
UniProtKBS1CYA2SubName: Full=Inner membrane protein yedI;
InterProS1CYA2 
PFAMS1CYA2 
ProdomS1CYA2 
UniProtKBC4ZQN1SubName: Full=Conserved inner membrane protein;
InterProC4ZQN1 
PFAMC4ZQN1 
ProdomC4ZQN1 
UniProtKBA0A140NAU0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT28740.1}
InterProA0A140NAU0 
PFAMA0A140NAU0 
ProdomA0A140NAU0 
UniProtKBC4W624SubName: Full=Putative uncharacterized protein;
InterProC4W624 
PFAMC4W624 
ProdomC4W624 
UniProtKBA0A1S9JLQ3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:OOO83845.1}
InterProA0A1S9JLQ3 
PFAMA0A1S9JLQ3 
ProdomA0A1S9JLQ3 
UniProtKBA0A7L7WZL9SubName: Full=DUF808 domain-containing protein {ECO:0000313|EMBL:QOD17938.1}
InterProA0A7L7WZL9 
PFAMA0A7L7WZL9 
ProdomA0A7L7WZL9 
UniProtKBB1X6B1SubName: Full=Conserved inner membrane protein;
InterProB1X6B1 
PFAMB1X6B1 
ProdomB1X6B1 
UniProtKBA0A5Q3TBK9SubName: Full=DUF808 family protein {ECO:0000313|EMBL:QGL41310.1}
InterProA0A5Q3TBK9 
PFAMA0A5Q3TBK9 
ProdomA0A5Q3TBK9 
UniProtKBA0A8F9HED0SubName: Full=DUF808 domain-containing protein {ECO:0000313|EMBL:QYE27339.1}
InterProA0A8F9HED0 
PFAMA0A8F9HED0 
ProdomA0A8F9HED0 
UniProtKBA0A6I1J4Y6SubName: Full=DUF808 family protein {ECO:0000313|EMBL:KAE9707461.1}
InterProA0A6I1J4Y6 
PFAMA0A6I1J4Y6 
ProdomA0A6I1J4Y6 
UniProtKBA0A7U8SK28SubName: Full=DUF808 domain-containing protein {ECO:0000313|EMBL:EFB5453084.1}
InterProA0A7U8SK28 
PFAMA0A7U8SK28 
ProdomA0A7U8SK28 
UniProtKBA0A8F8GZ99SubName: Full=DUF808 domain-containing protein {ECO:0000313|EMBL:QXZ38559.1}
InterProA0A8F8GZ99 
PFAMA0A8F8GZ99 
ProdomA0A8F8GZ99 
UniProtKBC6EBA8SubName: Full=Putative uncharacterized protein;
InterProC6EBA8 
PFAMC6EBA8 
ProdomC6EBA8 
UniProtKBC9QSM0SubName: Full=Putative uncharacterized protein yedI;
InterProC9QSM0 
PFAMC9QSM0 
ProdomC9QSM0 
UniProtKBH1EC78SubName: Full=Inner membrane protein yedI;
InterProH1EC78 
PFAMH1EC78 
ProdomH1EC78 
UniProtKBH0QD97SubName: Full=Conserved inner membrane protein;
InterProH0QD97 
PFAMH0QD97 
ProdomH0QD97 
UniProtKBG2EY52SubName: Full=Putative uncharacterized protein;
InterProG2EY52 
PFAMG2EY52 
ProdomG2EY52 
UniProtKBD6I948SubName: Full=Putative uncharacterized protein;
InterProD6I948 
PFAMD6I948 
ProdomD6I948 
UniProtKBA0A3R0X7U6SubName: Full=DUF808 domain-containing protein {ECO:0000313|EMBL:MLU12386.1}
InterProA0A3R0X7U6 
PFAMA0A3R0X7U6 
ProdomA0A3R0X7U6 
UniProtKBP46125RecName: Full=Inner membrane protein YedI;
InterProP46125 
PFAMP46125 
ProdomP46125 
UniProtKBP46125.2YEDI_ECOLI RecName: Full=Inner membrane protein yedI
InterProP46125.2 
PFAMP46125.2 
ProdomP46125.2 
UniProtKBP76332RecName: Full=Inner membrane protein YedI;
InterProP76332 
PFAMP76332 
ProdomP76332 
RefSeqYP_003035925.1 hypothetical protein ECBD_1688 [Escherichia coli BL21-Gold(DE3)pLysS AG]
RefSeqYP_002926958.1 conserved inner membrane protein [Escherichia coli BW2952]
RefSeqYP_001730921.1 inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
RefSeqZP_06657911.1 hypothetical protein ECDG_01825 [Escherichia coli B185]
RefSeqNP_416467.1 conserved inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
RefSeqAP_002569.1 conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110]
GenPept291432916hypothetical protein ECDG_01825
GenPept817579380DUF808 family inner membrane protein
GenPept899731710hypothetical protein ADZ28_10090
GenPept16129904 conserved inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
GenPept359332380conserved inner membrane protein
GenPept549813414conserved inner membrane protein
GenPept557272273hypothetical protein BN896_1762
GenPept664684280hypothetical protein HQ24_09695
GenPept682119463DUF808 family inner membrane protein
GenPept687672815conserved inner membrane protein
GenPept687677107conserved inner membrane protein
GenPept730583162conserved inner membrane protein
GenPept731470891conserved inner membrane protein
GenPept315136594hypothetical protein ECDH1ME8569_1897
GenPept293415268 hypothetical protein ECDG_01825 [Escherichia coli B185]
GenPept260448930protein of unknown function DUF808
GenPept169889436conserved inner membrane protein
GenPept170081601 inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenPept1736627conserved inner membrane protein
GenPept1788268DUF808 family inner membrane protein
GenPept238860184conserved inner membrane protein
GenPept238901162 conserved inner membrane protein [Escherichia coli BW2952]
GenPept2506681YEDI_ECOLI RecName: Full=Inner membrane protein yedI
GenPept253324138protein of unknown function DUF808
GenPept253773094 hypothetical protein ECBD_1688 [Escherichia coli BL21-Gold(DE3)pLysS AG]
GenPept732684148hypothetical protein EO53_08130
GenPept7466639B64960 membrane protein yedI - Escherichia coli
GenPept802135421conserved inner membrane protein
GenPept808730888hypothetical protein SH07_13835
GenPept808735303hypothetical protein SF31_14150
GenPept817575238DUF808 family inner membrane protein
GenPept817583519DUF808 family inner membrane protein
GenPept817587660DUF808 family inner membrane protein
GenPept817591800DUF808 family inner membrane protein
GenPept827616442conserved inner membrane protein
GenPept827622245conserved inner membrane protein
GenPept89108789 conserved inner membrane protein [Escherichia coli str. K-12 substr. W3110]
GenPept899722931hypothetical protein ADS71_10090
GenPept808722569hypothetical protein SH04_13830
GenPept899727286hypothetical protein ADZ27_10090
GenPept808700690hypothetical protein SH05_13945
GenPept808705065hypothetical protein SH02_13900
GenPept808709429hypothetical protein SH08_13940
GenPept808713788hypothetical protein SH03_13840
GenPept808718199hypothetical protein SH06_14145
GenBankEFF05895.1 hypothetical protein ECDG_01825 [Escherichia coli B185]
GenBankACX39352.1 protein of unknown function DUF808 [Escherichia coli DH1]
GenBankACT28740.1 protein of unknown function DUF808 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
GenBankACR62182.1 conserved inner membrane protein [Escherichia coli BW2952]
GenBankACB03143.1 conserved inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenBankAAC75024.1 conserved inner membrane protein [Escherichia coli str. K-12 substr. MG1655]