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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P52138.2
Original Database ID ref NP_417129.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yfjw_ecoli recname: full=uncharacterized
protein yfjw
Sequence Length 567

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region348-560
Protein Length567
Template PDB Code4brcA
Template Region52-248
Sequence Identity28%
E-Value0.67
GA3410.24
MPQS0.405961
z-DOPE1.68
TSVMod MethodMSALL
TSVMod RMSD17.673
TSVMod NO350.069
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4brc
DBALI4brcA 
JenaImageLibrary4brc 
Target Sequence
UniProtKBF9QWK5SubName: Full=CP4-57 prophage; putative inner membrane protein;
InterProF9QWK5 
PFAMF9QWK5 
ProdomF9QWK5 
UniProtKBC9R0Y9SubName: Full=CP4-57 prophage predicted inner membrane protein;
InterProC9R0Y9 
PFAMC9R0Y9 
ProdomC9R0Y9 
UniProtKBC4ZYQ4SubName: Full=CP4-57 prophage; predicted inner membrane protein;
InterProC4ZYQ4 
PFAMC4ZYQ4 
ProdomC4ZYQ4 
UniProtKBG2F792SubName: Full=CP4-57 prophage; putative inner membrane protein;
InterProG2F792 
PFAMG2F792 
ProdomG2F792 
UniProtKBP52138RecName: Full=Uncharacterized protein YfjW;
InterProP52138 
PFAMP52138 
ProdomP52138 
UniProtKBB1XBV9SubName: Full=CP4-57 prophage; predicted inner membrane protein;
InterProB1XBV9 
PFAMB1XBV9 
ProdomB1XBV9 
UniProtKBP77016RecName: Full=Uncharacterized protein YfjW;
InterProP77016 
PFAMP77016 
ProdomP77016 
UniProtKBS1HML5SubName: Full=Phage inner membrane protein {ECO:0000313|EMBL:EOW17080.1};
InterProS1HML5 
PFAMS1HML5 
ProdomS1HML5 
UniProtKBA0A0G3HTZ4SubName: Full=CP4-57 prophage putative inner membrane protein {ECO:0000313|EMBL:AKK15428.1};
InterProA0A0G3HTZ4 
PFAMA0A0G3HTZ4 
ProdomA0A0G3HTZ4 
UniProtKBA0A094Y315SubName: Full=Membrane protein {ECO:0000313|EMBL:AKO58138.1};SubName: Full=Putative membrane protein;
InterProA0A094Y315 
PFAMA0A094Y315 
ProdomA0A094Y315 
UniProtKBI0ZWM5SubName: Full=Putative inner membrane protein;
InterProI0ZWM5 
PFAMI0ZWM5 
ProdomI0ZWM5 
UniProtKBF9QWK5SubName: Full=CP4-57 prophage; putative inner membrane protein;
InterProF9QWK5 
PFAMF9QWK5 
ProdomF9QWK5 
UniProtKBA0A5Q3TCJ5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QGL41921.1}
InterProA0A5Q3TCJ5 
PFAMA0A5Q3TCJ5 
ProdomA0A5Q3TCJ5 
UniProtKBC4ZYQ4SubName: Full=CP4-57 prophage; predicted inner membrane protein;
InterProC4ZYQ4 
PFAMC4ZYQ4 
ProdomC4ZYQ4 
UniProtKBB1XBV9SubName: Full=CP4-57 prophage; predicted inner membrane protein;
InterProB1XBV9 
PFAMB1XBV9 
ProdomB1XBV9 
UniProtKBC9R0Y9SubName: Full=CP4-57 prophage; predicted inner membrane protein;
InterProC9R0Y9 
PFAMC9R0Y9 
ProdomC9R0Y9 
UniProtKBG2F792SubName: Full=CP4-57 prophage; putative inner membrane protein;
InterProG2F792 
PFAMG2F792 
ProdomG2F792 
UniProtKBI0ZWM5SubName: Full=Putative inner membrane protein;
InterProI0ZWM5 
PFAMI0ZWM5 
ProdomI0ZWM5 
UniProtKBA0A4S2YI55SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:GCU32098.1}
InterProA0A4S2YI55 
PFAMA0A4S2YI55 
ProdomA0A4S2YI55 
UniProtKBA0A8F8GYP1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QXZ37944.1}
InterProA0A8F8GYP1 
PFAMA0A8F8GYP1 
ProdomA0A8F8GYP1 
UniProtKBA0A8F9HD60SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QYE26723.1}
InterProA0A8F9HD60 
PFAMA0A8F9HD60 
ProdomA0A8F9HD60 
UniProtKBP52138RecName: Full=Uncharacterized protein YfjW;
InterProP52138 
PFAMP52138 
ProdomP52138 
UniProtKBP52138.2YFJW_ECOLI RecName: Full=Uncharacterized protein yfjW
InterProP52138.2 
PFAMP52138.2 
ProdomP52138.2 
UniProtKBP77016RecName: Full=Uncharacterized protein YfjW;
InterProP77016 
PFAMP77016 
ProdomP77016 
RefSeqAP_003220.1 predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_001731561.1 CP4-57 prophage; inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
RefSeqWP_075320790.1hypothetical protein
RefSeqNP_417129.1 CP4-57 prophage; predicted inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_002927592.1 CP4-57 prophage; putative inner membrane protein [Escherichia coli BW2952]
GenPept315137258CP4-57 prophage; predicted inner membrane protein
GenPept808731529membrane protein
GenPept932860714hypothetical protein BN1843_32120
GenPept899732379membrane protein
GenPept899727930membrane protein
GenPept899723575membrane protein
GenPept89109440 predicted inner membrane protein [Escherichia coli str. K-12 substr. W3110]
GenPept827622783CP4-57 prophage putative inner membrane protein
GenPept827619445CP4-57 prophage putative inner membrane protein
GenPept730583842CP4-57 prophage; predicted inner membrane protein
GenPept687677770CP4-57 prophage; predicted inner membrane protein
GenPept687673483CP4-57 prophage; predicted inner membrane protein
GenPept682120108CP4-57 prophage; putative inner membrane protein
GenPept664684933membrane protein
GenPept63089053unnamed protein product
GenPept557274098CP4-57 prophage; putative inner membrane protein
GenPept549814052CP4-57 prophage; predicted inner membrane protein
GenPept33757431Sequence 409 from patent US 6589738
GenPept260448290hypothetical protein EcDH1_1035
GenPept2507583YFJW_ECOLI RecName: Full=Uncharacterized protein yfjW
GenPept238901796 CP4-57 prophage; putative inner membrane protein [Escherichia coli BW2952]
GenPept238860629CP4-57 prophage; predicted inner membrane protein
GenPept2367146CP4-57 prophage; putative inner membrane protein
GenPept1800032predicted inner membrane protein
GenPept170082241 CP4-57 prophage; inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenPept169890076CP4-57 prophage; predicted inner membrane protein
GenPept731471571CP4-57 prophage; predicted inner membrane protein
GenPept732683499membrane protein
GenPept817592442CP4-57 prophage, putative inner membrane protein
GenPept817588302CP4-57 prophage, putative inner membrane protein
GenPept817584161CP4-57 prophage, putative inner membrane protein
GenPept817580022CP4-57 prophage, putative inner membrane protein
GenPept817575880CP4-57 prophage, putative inner membrane protein
GenPept808735958membrane protein
GenPept808723213membrane protein
GenPept808718841membrane protein
GenPept808714431membrane protein
GenPept808710069membrane protein
GenPept808705709membrane protein
GenPept808701335membrane protein
GenPept7466416D65043 hypothetical protein b2642 - Escherichia coli (strain K-12)
GenPept16130557 CP4-57 prophage; predicted inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
GenBankAAC75690.1 CP4-57 prophage; predicted inner membrane protein [Escherichia coli str. K-12 substr. MG1655]
GenBankACB03783.1 CP4-57 prophage; predicted inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
GenBankACR62627.1 CP4-57 prophage; predicted inner membrane protein [Escherichia coli BW2952]
GenBankACX38712.1 hypothetical protein EcDH1_1035 [Escherichia coli DH1]