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Sequence Information

Primary Database Link A0A0G3HYW6
Original Database ID ref NP_417131.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=cp4-57 prophage
putative dna repair protein {eco:0000313|embl:akk1
8519.1};
Sequence Length 160

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region40-160
Protein Length160
Template PDB Code2qlcA
Template Region6-126
Sequence Identity38%
E-Value0
GA3411
MPQS1.34375
z-DOPE-1.34
TSVMod MethodMSALL
TSVMod RMSD2.295
TSVMod NO350.89
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2qlcthe crystal structure of dna repair protein radc from chlorobium tepidum tls
DBALI2qlcA 
CATH3.40.140.10 Domain: 2qlcA00 Cytidine Deaminase, domain 2 (96%)
JenaImageLibrary2qlc 
Target Sequence
UniProtKBC9R0Y7SubName: Full=CP4-57 prophage putative DNA repair protein;SubName: Full=DNA repair protein RadC;
InterProC9R0Y7 
PFAMC9R0Y7 
ProdomC9R0Y7 
UniProtKBB1XBW1SubName: Full=CP4-57 prophage; predicted DNA repair protein;
InterProB1XBW1 
PFAMB1XBW1 
ProdomB1XBW1 
UniProtKBA0A0H4IUQ9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKO58142.1};
InterProA0A0H4IUQ9 
PFAMA0A0H4IUQ9 
ProdomA0A0H4IUQ9 
UniProtKBI0ZWM2SubName: Full=Putative DNA repair protein;
InterProI0ZWM2 
PFAMI0ZWM2 
ProdomI0ZWM2 
UniProtKBA0A0G3HYW6SubName: Full=CP4-57 prophage putative DNA repair protein {ECO:0000313|EMBL:AKK18519.1};
InterProA0A0G3HYW6 
PFAMA0A0G3HYW6 
ProdomA0A0G3HYW6 
UniProtKBP52140RecName: Full=UPF0758 protein YfjY;
InterProP52140 
PFAMP52140 
ProdomP52140 
UniProtKBS1HP08SubName: Full=DNA repair protein {ECO:0000313|EMBL:EOW17082.1};
InterProS1HP08 
PFAMS1HP08 
ProdomS1HP08 
UniProtKBC4ZYQ6SubName: Full=CP4-57 prophage; predicted DNA repair protein;
InterProC4ZYQ6 
PFAMC4ZYQ6 
ProdomC4ZYQ6 
UniProtKBA0A5Q3TCD0SubName: Full=DNA repair protein RadC {ECO:0000313|EMBL:QGL41923.1}
InterProA0A5Q3TCD0 
PFAMA0A5Q3TCD0 
ProdomA0A5Q3TCD0 
UniProtKBA0A8F8DMT9SubName: Full=RadC family protein {ECO:0000313|EMBL:QXZ37942.1}
InterProA0A8F8DMT9 
PFAMA0A8F8DMT9 
ProdomA0A8F8DMT9 
UniProtKBB1XBW1SubName: Full=CP4-57 prophage; predicted DNA repair protein;
InterProB1XBW1 
PFAMB1XBW1 
ProdomB1XBW1 
UniProtKBC4ZYQ6SubName: Full=CP4-57 prophage; predicted DNA repair protein;
InterProC4ZYQ6 
PFAMC4ZYQ6 
ProdomC4ZYQ6 
UniProtKBC9R0Y7SubName: Full=CP4-57 prophage; putative DNA repair protein;SubName: Full=DNA repair protein RadC;
InterProC9R0Y7 
PFAMC9R0Y7 
ProdomC9R0Y7 
UniProtKBI0ZWM2SubName: Full=Putative DNA repair protein;
InterProI0ZWM2 
PFAMI0ZWM2 
ProdomI0ZWM2 
UniProtKBA0A373F4F1SubName: Full=CP4-57 prophage putative DNA repair protein {ECO:0000313|EMBL:STL84576.1}SubName: Full=DNA repair protein {ECO:0000313|EMBL:GCU32094.1}SubName: Full=DNA repair protein RadC {ECO:0000313|
InterProA0A373F4F1 
PFAMA0A373F4F1 
ProdomA0A373F4F1 
UniProtKBA0A8F9HCP7SubName: Full=RadC family protein {ECO:0000313|EMBL:QYE26721.1}
InterProA0A8F9HCP7 
PFAMA0A8F9HCP7 
ProdomA0A8F9HCP7 
UniProtKBP52140RecName: Full=UPF0758 protein YfjY;
InterProP52140 
PFAMP52140 
ProdomP52140 
UniProtKBP52140.1YFJY_ECOLI RecName: Full=UPF0758 protein yfjY
InterProP52140.1 
PFAMP52140.1 
ProdomP52140.1 
RefSeqYP_001731563.1 CP4-57 prophage; DNA repair protein [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_003222.1 predicted DNA repair protein [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002927594.1 CP4-57 prophage; putative DNA repair protein [Escherichia coli BW2952]
RefSeqNP_417131.1 CP4-57 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655]
GenPept817592444CP4-57 prophage, putative DNA repair protein
GenPept827619443CP4-57 prophage putative DNA repair protein
GenPept827622785CP4-57 prophage putative DNA repair protein
GenPept89109442 predicted DNA repair protein [Escherichia coli str. K-12 substr. W3110]
GenPept899723577hypothetical protein ADS71_13605
GenPept899727932hypothetical protein ADZ27_13605
GenPept899732381hypothetical protein ADZ28_13605
GenPept932860717DNA repair protein RadC
GenPept808718843hypothetical protein SH06_17665
GenPept238901798 CP4-57 prophage; putative DNA repair protein [Escherichia coli BW2952]
GenPept817588304CP4-57 prophage, putative DNA repair protein
GenPept817584163CP4-57 prophage, putative DNA repair protein
GenPept169890078CP4-57 prophage; predicted DNA repair protein
GenPept170082243 CP4-57 prophage; DNA repair protein [Escherichia coli str. K-12 substr. DH10B]
GenPept687677772CP4-57 prophage; predicted DNA repair protein
GenPept687673485CP4-57 prophage; predicted DNA repair protein
GenPept682120110CP4-57 prophage; putative DNA repair protein
GenPept664684935hypothetical protein HQ24_13185
GenPept557274096CP4-57 prophage; putative DNA repair protein
GenPept549814054CP4-57 prophage; predicted DNA repair protein
GenPept315137260CP4-57 prophage; putative DNA repair protein
GenPept260448288DNA repair protein RadC
GenPept238860625CP4-57 prophage; predicted DNA repair protein
GenPept1800034predicted DNA repair protein
GenPept1788997CP4-57 prophage; putative DNA repair protein
GenPept16130559 CP4-57 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655]
GenPept1033138ORF_o160
GenPept730583844CP4-57 prophage; predicted DNA repair protein
GenPept817580024CP4-57 prophage, putative DNA repair protein
GenPept817575882CP4-57 prophage, putative DNA repair protein
GenPept808735960hypothetical protein SF31_17710
GenPept808731531hypothetical protein SH07_17355
GenPept808723215hypothetical protein SH04_17350
GenPept808714433hypothetical protein SH03_17360
GenPept808710071hypothetical protein SH08_17460
GenPept808705711hypothetical protein SH02_17420
GenPept808701337hypothetical protein SH05_17465
GenPept802136019CP4-57 prophage; predicted DNA repair protein
GenPept7467173T08655 yfjY protein - Escherichia coli
GenPept732683497hypothetical protein EO53_04570
GenPept731471573CP4-57 prophage; predicted DNA repair protein
GenPept1723637YFJY_ECOLI RecName: Full=UPF0758 protein yfjY
GenBankACR62623.1 CP4-57 prophage; predicted DNA repair protein [Escherichia coli BW2952]
GenBankACB03785.1 CP4-57 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. DH10B]
GenBankAAC75692.1 CP4-57 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655]
GenBankAAA79812.1 ORF_o160 [Escherichia coli str. K-12 substr. MG1655]
GenBankACX38710.1 DNA repair protein RadC [Escherichia coli DH1]