University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P55734
Original Database ID ref NP_417154.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=inner membrane protein
ygap;
Sequence Length 174

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region107-174
Protein Length174
Template PDB Code2mpnA
Template Region106-173
Sequence Identity99%
E-Value0
GA3410.54
MPQS1.3078
z-DOPE1.21
TSVMod MethodMSALL
TSVMod RMSD6.035
TSVMod NO350.493
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2mpn
DBALI2mpnA 
JenaImageLibrary2mpn 
Target Sequence
UniProtKBM8S5T5SubName: Full=Inner membrane protein ygaP;
InterProM8S5T5 
PFAMM8S5T5 
ProdomM8S5T5 
UniProtKBI2ZS36SubName: Full=PF11127 family protein;
InterProI2ZS36 
PFAMI2ZS36 
ProdomI2ZS36 
UniProtKBK3JHM5SubName: Full=Inner membrane protein ygaP;
InterProK3JHM5 
PFAMK3JHM5 
ProdomK3JHM5 
UniProtKBI2YLY3SubName: Full=PF11127 family protein;
InterProI2YLY3 
PFAMI2YLY3 
ProdomI2YLY3 
UniProtKBI2HZM4SubName: Full=Rhodanese domain-containing protein;
InterProI2HZM4 
PFAMI2HZM4 
ProdomI2HZM4 
UniProtKBL3IED6SubName: Full=Inner membrane protein ygaP;
InterProL3IED6 
PFAML3IED6 
ProdomL3IED6 
UniProtKBK5GW04SubName: Full=Inner membrane protein ygaP;
InterProK5GW04 
PFAMK5GW04 
ProdomK5GW04 
UniProtKBK5FNF2SubName: Full=Inner membrane protein ygaP;
InterProK5FNF2 
PFAMK5FNF2 
ProdomK5FNF2 
UniProtKBL3VCQ4SubName: Full=Inner membrane protein ygaP;
InterProL3VCQ4 
PFAML3VCQ4 
ProdomL3VCQ4 
UniProtKBL3TK86SubName: Full=Inner membrane protein ygaP;
InterProL3TK86 
PFAML3TK86 
ProdomL3TK86 
UniProtKBL3ZNE9SubName: Full=Inner membrane protein ygaP;
InterProL3ZNE9 
PFAML3ZNE9 
ProdomL3ZNE9 
UniProtKBI4TUT2SubName: Full=Putative inner membrane protein with hydrolase activity;
InterProI4TUT2 
PFAMI4TUT2 
ProdomI4TUT2 
UniProtKBI2PBR7SubName: Full=Inner membrane protein ygaP;
InterProI2PBR7 
PFAMI2PBR7 
ProdomI2PBR7 
UniProtKBH4X8I8SubName: Full=Inner membrane protein with hydrolase activity;
InterProH4X8I8 
PFAMH4X8I8 
ProdomH4X8I8 
UniProtKBF9QWM3SubName: Full=Putative inner membrane protein with hydrolase activity;
InterProF9QWM3 
PFAMF9QWM3 
ProdomF9QWM3 
UniProtKBG0F3Q6SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:AEJ57979.1};
InterProG0F3Q6 
PFAMG0F3Q6 
ProdomG0F3Q6 
UniProtKBM8THG0SubName: Full=Inner membrane protein ygaP;
InterProM8THG0 
PFAMM8THG0 
ProdomM8THG0 
UniProtKBM8V722SubName: Full=Inner membrane protein ygaP;
InterProM8V722 
PFAMM8V722 
ProdomM8V722 
UniProtKBG2EZW5SubName: Full=Putative inner membrane protein with hydrolase activity;
InterProG2EZW5 
PFAMG2EZW5 
ProdomG2EZW5 
UniProtKBH0Q979SubName: Full=Predicted inner membrane protein with hydrolase activity;
InterProH0Q979 
PFAMH0Q979 
ProdomH0Q979 
UniProtKBM9G023SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:EMX18317.1};
InterProM9G023 
PFAMM9G023 
ProdomM9G023 
UniProtKBH4W027SubName: Full=Inner membrane protein ygaP;
InterProH4W027 
PFAMH4W027 
ProdomH4W027 
UniProtKBM9EUT7SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:EMW99096.1};
InterProM9EUT7 
PFAMM9EUT7 
ProdomM9EUT7 
UniProtKBM8LKQ9SubName: Full=Inner membrane protein ygaP;
InterProM8LKQ9 
PFAMM8LKQ9 
ProdomM8LKQ9 
UniProtKBB1IV05SubName: Full=Rhodanese domain protein;
InterProB1IV05 
PFAMB1IV05 
ProdomB1IV05 
UniProtKBL3REF7SubName: Full=Inner membrane protein ygaP;
InterProL3REF7 
PFAML3REF7 
ProdomL3REF7 
UniProtKBA0A074I816SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEN96462.1};
InterProA0A074I816 
PFAMA0A074I816 
ProdomA0A074I816 
UniProtKBA0A074ICX5SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEO08660.1};
InterProA0A074ICX5 
PFAMA0A074ICX5 
ProdomA0A074ICX5 
UniProtKBA0A079DF04SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDY20466.1};
InterProA0A079DF04 
PFAMA0A079DF04 
ProdomA0A079DF04 
UniProtKBA0A079F609SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDY51320.1};
InterProA0A079F609 
PFAMA0A079F609 
ProdomA0A079F609 
UniProtKBA0A079FUQ2SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDY66931.1};
InterProA0A079FUQ2 
PFAMA0A079FUQ2 
ProdomA0A079FUQ2 
UniProtKBA0A079H332SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDY96908.1};
InterProA0A079H332 
PFAMA0A079H332 
ProdomA0A079H332 
UniProtKBA0A080EFD9SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEN47170.1};
InterProA0A080EFD9 
PFAMA0A080EFD9 
ProdomA0A080EFD9 
UniProtKBA0A080F0I6SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEN54833.1};
InterProA0A080F0I6 
PFAMA0A080F0I6 
ProdomA0A080F0I6 
UniProtKBA0A080GPS5SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEN88959.1};
InterProA0A080GPS5 
PFAMA0A080GPS5 
ProdomA0A080GPS5 
UniProtKBA0A080HY18SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEO22719.1};
InterProA0A080HY18 
PFAMA0A080HY18 
ProdomA0A080HY18 
UniProtKBA0A073T8T5SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEL23079.1};
InterProA0A073T8T5 
PFAMA0A073T8T5 
ProdomA0A073T8T5 
UniProtKBA0A073GQW2SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KEJ67281.1};
InterProA0A073GQW2 
PFAMA0A073GQW2 
ProdomA0A073GQW2 
UniProtKBA0A071D4H5SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDZ35883.1};
InterProA0A071D4H5 
PFAMA0A071D4H5 
ProdomA0A071D4H5 
UniProtKBL4WA56SubName: Full=Inner membrane protein ygaP;
InterProL4WA56 
PFAML4WA56 
ProdomL4WA56 
UniProtKBC1NCM0SubName: Full=Rhodanese domain-containing protein;
InterProC1NCM0 
PFAMC1NCM0 
ProdomC1NCM0 
UniProtKBA0A037YFI4SubName: Full=Inner membrane protein YgaP {ECO:0000313|EMBL:KGM70875.1};SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:CEE08849.1};SubName: Full=Membrane protein {ECO:0000313|EMBL:AJB5274
InterProA0A037YFI4 
PFAMA0A037YFI4 
ProdomA0A037YFI4 
UniProtKBA0A069XNK9SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDU29110.1};
InterProA0A069XNK9 
PFAMA0A069XNK9 
ProdomA0A069XNK9 
UniProtKBA0A069YXF9SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDU49663.1};
InterProA0A069YXF9 
PFAMA0A069YXF9 
ProdomA0A069YXF9 
UniProtKBA0A070UVM7SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDX46346.1};
InterProA0A070UVM7 
PFAMA0A070UVM7 
ProdomA0A070UVM7 
UniProtKBA0A070XZE0SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDX84060.1};
InterProA0A070XZE0 
PFAMA0A070XZE0 
ProdomA0A070XZE0 
UniProtKBA0A071B0F3SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDY63454.1};
InterProA0A071B0F3 
PFAMA0A071B0F3 
ProdomA0A071B0F3 
UniProtKBA0A071BSS0SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDY85398.1};
InterProA0A071BSS0 
PFAMA0A071BSS0 
ProdomA0A071BSS0 
UniProtKBA0A071C963SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:KDZ13749.1};
InterProA0A071C963 
PFAMA0A071C963 
ProdomA0A071C963 
UniProtKBA0A0E0U3B8SubName: Full=Inner membrane protein YgaP {ECO:0000313|EMBL:AEE57884.1};
InterProA0A0E0U3B8 
PFAMA0A0E0U3B8 
ProdomA0A0E0U3B8 
UniProtKBF4M9I2SubName: Full=Inner membrane protein YgaP;
InterProF4M9I2 
PFAMF4M9I2 
ProdomF4M9I2 
UniProtKBA0A0E1M0G6SubName: Full=Putative inner membrane protein with hydrolase activity {ECO:0000313|EMBL:AJF57485.1};
InterProA0A0E1M0G6 
PFAMA0A0E1M0G6 
ProdomA0A0E1M0G6 
UniProtKBH4VJW0SubName: Full=Inner membrane protein ygaP;
InterProH4VJW0 
PFAMH4VJW0 
ProdomH4VJW0 
UniProtKBI2Y6H4SubName: Full=PF11127 family protein;
InterProI2Y6H4 
PFAMI2Y6H4 
ProdomI2Y6H4 
UniProtKBK5BT64SubName: Full=Rhodanese domain protein {ECO:0000313|EMBL:EKJ81374.1};
InterProK5BT64 
PFAMK5BT64 
ProdomK5BT64 
UniProtKBL3QQV4SubName: Full=Inner membrane protein ygaP;
InterProL3QQV4 
PFAML3QQV4 
ProdomL3QQV4 
UniProtKBH9UVS3SubName: Full=Putative inner membrane protein with hydrolase activity {ECO:0000313|EMBL:AFG41616.1};
InterProH9UVS3 
PFAMH9UVS3 
ProdomH9UVS3 
UniProtKBL8C255SubName: Full=Rhodanese-related sulfurtransferases;
InterProL8C255 
PFAML8C255 
ProdomL8C255 
UniProtKBM7WGL2SubName: Full=Uncharacterized protein;
InterProM7WGL2 
PFAMM7WGL2 
ProdomM7WGL2 
UniProtKBM8LHQ9SubName: Full=Inner membrane protein ygaP;
InterProM8LHQ9 
PFAMM8LHQ9 
ProdomM8LHQ9 
UniProtKBE0J5N1SubName: Full=Predicted inner membrane protein with hydrolase activity {ECO:0000313|EMBL:ADT76276.1};SubName: Full=Putative inner membrane protein with hydrolase activity {ECO:0000313|EMBL:AFH12457.1}
InterProE0J5N1 
PFAME0J5N1 
ProdomE0J5N1 
UniProtKBE8Y903SubName: Full=Rhodanese domain protein {ECO:0000313|EMBL:ADX49738.1};
InterProE8Y903 
PFAME8Y903 
ProdomE8Y903 
UniProtKBM8ZM54SubName: Full=Inner membrane protein ygaP;
InterProM8ZM54 
PFAMM8ZM54 
ProdomM8ZM54 
UniProtKBM8SGP1SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:EMV56188.1};
InterProM8SGP1 
PFAMM8SGP1 
ProdomM8SGP1 
UniProtKBM8NRJ3SubName: Full=Inner membrane protein ygaP;
InterProM8NRJ3 
PFAMM8NRJ3 
ProdomM8NRJ3 
UniProtKBA0A0E3H3N5SubName: Full=Inner membrane protein YgaP {ECO:0000313|EMBL:AKA91726.1};
InterProA0A0E3H3N5 
PFAMA0A0E3H3N5 
ProdomA0A0E3H3N5 
UniProtKBM8MSD4SubName: Full=Inner membrane protein ygaP;
InterProM8MSD4 
PFAMM8MSD4 
ProdomM8MSD4 
UniProtKBA0A0G3HTY2SubName: Full=Putative inner membrane protein with hydrolase activity protein {ECO:0000313|EMBL:AKK15413.1};
InterProA0A0G3HTY2 
PFAMA0A0G3HTY2 
ProdomA0A0G3HTY2 
UniProtKBL4NXP4SubName: Full=Inner membrane protein ygaP;
InterProL4NXP4 
PFAML4NXP4 
ProdomL4NXP4 
UniProtKBE3PH38SubName: Full=Putative membrane protein {ECO:0000313|EMBL:CBJ02365.1};
InterProE3PH38 
PFAME3PH38 
ProdomE3PH38 
UniProtKBG2AY61SubName: Full=Inner membrane protein ygaP;
InterProG2AY61 
PFAMG2AY61 
ProdomG2AY61 
UniProtKBI2XBH5SubName: Full=PF11127 family protein {ECO:0000313|EMBL:EII46345.1};
InterProI2XBH5 
PFAMI2XBH5 
ProdomI2XBH5 
UniProtKBL3M2D4SubName: Full=Inner membrane protein ygaP;
InterProL3M2D4 
PFAML3M2D4 
ProdomL3M2D4 
UniProtKBC4ZYS0SubName: Full=Predicted inner membrane protein with hydrolase activity;
InterProC4ZYS0 
PFAMC4ZYS0 
ProdomC4ZYS0 
UniProtKBD8B5N0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ65657.1};
InterProD8B5N0 
PFAMD8B5N0 
ProdomD8B5N0 
UniProtKBE9WJP7SubName: Full=YgaP protein;
InterProE9WJP7 
PFAME9WJP7 
ProdomE9WJP7 
UniProtKBF4SND1SubName: Full=Inner membrane protein YgaP {ECO:0000313|EMBL:EGI09051.1};
InterProF4SND1 
PFAMF4SND1 
ProdomF4SND1 
UniProtKBC9R0X3SubName: Full=Putative inner membrane protein with hydrolase activity;SubName: Full=Rhodanese domain protein;
InterProC9R0X3 
PFAMC9R0X3 
ProdomC9R0X3 
UniProtKBD7XZG3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ99230.1};
InterProD7XZG3 
PFAMD7XZG3 
ProdomD7XZG3 
UniProtKBD8AP31SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK15099.1};
InterProD8AP31 
PFAMD8AP31 
ProdomD8AP31 
UniProtKBM7UK48SubName: Full=Uncharacterized protein;
InterProM7UK48 
PFAMM7UK48 
ProdomM7UK48 
UniProtKBD8BZV4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFI87789.1};
InterProD8BZV4 
PFAMD8BZV4 
ProdomD8BZV4 
UniProtKBM2PAL3SubName: Full=Putative inner membrane protein with hydrolase activity;
InterProM2PAL3 
PFAMM2PAL3 
ProdomM2PAL3 
UniProtKBI0ZWK2SubName: Full=Rhodanese domain protein;
InterProI0ZWK2 
PFAMI0ZWK2 
ProdomI0ZWK2 
UniProtKBE1HLN7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK91162.1};
InterProE1HLN7 
PFAME1HLN7 
ProdomE1HLN7 
UniProtKBM8MY70SubName: Full=Inner membrane protein ygaP;
InterProM8MY70 
PFAMM8MY70 
ProdomM8MY70 
UniProtKBM8MK49SubName: Full=Inner membrane protein ygaP;
InterProM8MK49 
PFAMM8MK49 
ProdomM8MK49 
UniProtKBB1XCK6SubName: Full=Predicted inner membrane protein with hydrolase activity;
InterProB1XCK6 
PFAMB1XCK6 
ProdomB1XCK6 
UniProtKBL4K9R6SubName: Full=Inner membrane protein ygaP;
InterProL4K9R6 
PFAML4K9R6 
ProdomL4K9R6 
UniProtKBL3WUF6SubName: Full=Inner membrane protein ygaP;
InterProL3WUF6 
PFAML3WUF6 
ProdomL3WUF6 
UniProtKBM8M8H8SubName: Full=Inner membrane protein ygaP;
InterProM8M8H8 
PFAMM8M8H8 
ProdomM8M8H8 
UniProtKBG2CP26SubName: Full=Inner membrane protein ygaP;
InterProG2CP26 
PFAMG2CP26 
ProdomG2CP26 
UniProtKBM9GD98SubName: Full=Inner membrane protein ygaP;
InterProM9GD98 
PFAMM9GD98 
ProdomM9GD98 
UniProtKBH4WEB4SubName: Full=Inner membrane protein with hydrolase activity;
InterProH4WEB4 
PFAMH4WEB4 
ProdomH4WEB4 
UniProtKBI2QZ24SubName: Full=Inner membrane protein ygaP;
InterProI2QZ24 
PFAMI2QZ24 
ProdomI2QZ24 
UniProtKBK3HWC3SubName: Full=Inner membrane protein ygaP;
InterProK3HWC3 
PFAMK3HWC3 
ProdomK3HWC3 
UniProtKBK3JCW9SubName: Full=Inner membrane protein ygaP;
InterProK3JCW9 
PFAMK3JCW9 
ProdomK3JCW9 
UniProtKBL2Z4K4SubName: Full=Inner membrane protein ygaP;
InterProL2Z4K4 
PFAML2Z4K4 
ProdomL2Z4K4 
UniProtKBL3KGK2SubName: Full=Inner membrane protein ygaP {ECO:0000313|EMBL:ELD98130.1};
InterProL3KGK2 
PFAML3KGK2 
ProdomL3KGK2 
UniProtKBM8QLK0SubName: Full=Inner membrane protein ygaP;
InterProM8QLK0 
PFAMM8QLK0 
ProdomM8QLK0