University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P58033.1
Original Database ID ref YP_588466.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation ypjj_ecoli recname: full=uncharacterized
protein ypjj
Sequence Length 66

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region5-46
Protein Length66
Template PDB Code2g7eA
Template Region27-59
Sequence Identity42%
E-Value0.6
GA3410.11
MPQS0.767764
z-DOPE0.21
TSVMod MethodMSALL
TSVMod RMSD9.466
TSVMod NO350.108
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2g7ethe 1.6 a crystal structure of vibrio cholerae extracellular endonuclease i
DBALI2g7eA 
JenaImageLibrary2g7e 
Target Sequence
UniProtKBS1I136SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOW17083.1};
InterProS1I136 
PFAMS1I136 
ProdomS1I136 
UniProtKBC4ZYQ7SubName: Full=Predicted protein;
InterProC4ZYQ7 
PFAMC4ZYQ7 
ProdomC4ZYQ7 
UniProtKBB1XBW2SubName: Full=Predicted protein;
InterProB1XBW2 
PFAMB1XBW2 
ProdomB1XBW2 
UniProtKBC9R0Y6SubName: Full=Uncharacterized protein;
InterProC9R0Y6 
PFAMC9R0Y6 
ProdomC9R0Y6 
UniProtKBG2F795SubName: Full=Putative uncharacterized protein;
InterProG2F795 
PFAMG2F795 
ProdomG2F795 
UniProtKBM2NQ36SubName: Full=Uncharacterized protein;
InterProM2NQ36 
PFAMM2NQ36 
ProdomM2NQ36 
UniProtKBP58033RecName: Full=Uncharacterized protein YpjJ;
InterProP58033 
PFAMP58033 
ProdomP58033 
UniProtKBQ2EET3RecName: Full=Uncharacterized protein YpjJ;
InterProQ2EET3 
PFAMQ2EET3 
ProdomQ2EET3 
UniProtKBQ2MAD3RecName: Full=Uncharacterized protein YpjJ;
InterProQ2MAD3 
PFAMQ2MAD3 
ProdomQ2MAD3 
UniProtKBA0A373F4G0SubName: Full=CP4-44 prophage {ECO:0000313|EMBL:STL84567.1}SubName: Full=DUF987 family protein {ECO:0000313|EMBL:QGF37183.1}
InterProA0A373F4G0 
PFAMA0A373F4G0 
ProdomA0A373F4G0 
UniProtKBA0A5Q3TBL7SubName: Full=DUF987 family protein {ECO:0000313|EMBL:QGL41924.1}
InterProA0A5Q3TBL7 
PFAMA0A5Q3TBL7 
ProdomA0A5Q3TBL7 
UniProtKBA0A8F8DNY5SubName: Full=DUF987 domain-containing protein {ECO:0000313|EMBL:QXZ37941.1}
InterProA0A8F8DNY5 
PFAMA0A8F8DNY5 
ProdomA0A8F8DNY5 
UniProtKBA0A8F9HCP4SubName: Full=DUF987 domain-containing protein {ECO:0000313|EMBL:QYE26720.1}
InterProA0A8F9HCP4 
PFAMA0A8F9HCP4 
ProdomA0A8F9HCP4 
UniProtKBB1XBW2SubName: Full=Predicted protein;
InterProB1XBW2 
PFAMB1XBW2 
ProdomB1XBW2 
UniProtKBC4ZYQ7SubName: Full=Predicted protein;
InterProC4ZYQ7 
PFAMC4ZYQ7 
ProdomC4ZYQ7 
UniProtKBQ2EET3Predicted protein
InterProQ2EET3 
PFAMQ2EET3 
ProdomQ2EET3 
UniProtKBG2F795SubName: Full=Putative uncharacterized protein;
InterProG2F795 
PFAMG2F795 
ProdomG2F795 
UniProtKBC9R0Y6SubName: Full=Putative uncharacterized protein ypjJ;
InterProC9R0Y6 
PFAMC9R0Y6 
ProdomC9R0Y6 
UniProtKBQ2MAD3Hypothetical protein ypjJ
InterProQ2MAD3 
PFAMQ2MAD3 
ProdomQ2MAD3 
UniProtKBP58033RecName: Full=Uncharacterized protein YpjJ;
InterProP58033 
PFAMP58033 
ProdomP58033 
UniProtKBP58033.1YPJJ_ECOLI RecName: Full=Uncharacterized protein ypjJ
InterProP58033.1 
PFAMP58033.1 
ProdomP58033.1 
UniProtKBQ2EET3RecName: Full=Uncharacterized protein YpjJ;
InterProQ2EET3 
PFAMQ2EET3 
ProdomQ2EET3 
UniProtKBQ2MAD3RecName: Full=Uncharacterized protein YpjJ;
InterProQ2MAD3 
PFAMQ2MAD3 
ProdomQ2MAD3 
RefSeqYP_001731564.1 hypothetical protein ECDH10B_2812 [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_003223.1 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002927595.1 hypothetical protein BWG_2398 [Escherichia coli BW2952]
RefSeqYP_588466.1 predicted protein [Escherichia coli str. K-12 substr. MG1655]
RefSeqZP_03385779.1 hypothetical protein SentesT_27485 [Salmonella enterica subsp. enterica serovar Typhi str. M223]
GenPept549814055ypjJ
GenPept260448287protein of unknown function DUF987
GenPept238901799 hypothetical protein BWG_2398 [Escherichia coli BW2952]
GenPept238863046predicted protein
GenPept213861075 hypothetical protein SentesT_27485 [Salmonella enterica subsp. enterica serovar Typhi str. M223]
GenPept170082244 hypothetical protein ECDH10B_2812 [Escherichia coli str. K-12 substr. DH10B]
GenPept315137261hypothetical protein ECDH1ME8569_2564
GenPept169890079predicted protein
GenPept13878858YPJJ_ECOLI RecName: Full=Uncharacterized protein ypjJ
GenPept557274095hypothetical protein BN896_2398
GenPept682120111uncharacterized protein BW25113_4548
GenPept817588305uncharacterized protein SG47_2695
GenPept817592445uncharacterized protein CS35_2695
GenPept817580025uncharacterized protein SG49_2695
GenPept87082144uncharacterized protein b4548
GenPept89109443 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept94541123 predicted protein [Escherichia coli str. K-12 substr. MG1655]
GenPept817575883uncharacterized protein SG48_2705
GenPept802136020hypothetical protein b4548
GenPept731473347hypothetical protein ER3413_4561
GenPept730585618hypothetical protein ER2796_4561
GenPept687677773CP4-57 prophage; predicted protein
GenPept85675504hypothetical protein
GenPept687673486CP4-57 prophage; predicted protein
GenPept817584164uncharacterized protein SG46_2695
GenBankABD18698.1 predicted protein [Escherichia coli str. K-12 substr. MG1655]
GenBankACB03786.1 predicted protein [Escherichia coli str. K-12 substr. DH10B]
GenBankACR65044.1 predicted protein [Escherichia coli BW2952]
GenBankACX38709.1 protein of unknown function DUF987 [Escherichia coli DH1]