University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A023Z169
Original Database ID ref NP_417083.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation recname: full=chaperone protein
clpb {eco:0000256|rulebase:ru362034};
Sequence Length 857

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region4-855
Protein Length857
Template PDB Code1qvrA
Template Region4-846
Sequence Identity54%
E-Value0
GA3411
MPQS1.54587
z-DOPE0.05
TSVMod MethodMSALL
TSVMod RMSD13.055
TSVMod NO350.546
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1qvrcrystal structure analysis of clpb
DBALI1qvrA 
CATH1.10.1780.10 Domain: 1qvrA01 Double Clp-N motif (100%)
CATH3.40.50.300 Domain: 1qvrA02 P-loop containing nucleotide triphosphate hydrolases (100%)
CATH3.40.50.300 Domain: 1qvrA04 P-loop containing nucleotide triphosphate hydrolases (100%)
CATH1.10.8.60 Domain: 1qvrA05 Helicase, Ruva Protein; domain 3 (96%)
JenaImageLibrary1qvr 
Target Sequence
UniProtKBB3AEN3SubName: Full=ATP-dependent chaperone ClpB;
InterProB3AEN3 
PFAMB3AEN3 
ProdomB3AEN3 
UniProtKBA0A028B276RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A028B276 
PFAMA0A028B276 
ProdomA0A028B276 
UniProtKBA0A028DZ99RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A028DZ99 
PFAMA0A028DZ99 
ProdomA0A028DZ99 
UniProtKBA0A029KI02RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A029KI02 
PFAMA0A029KI02 
ProdomA0A029KI02 
UniProtKBA0A029LFQ2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A029LFQ2 
PFAMA0A029LFQ2 
ProdomA0A029LFQ2 
UniProtKBA0A029PEY9RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A029PEY9 
PFAMA0A029PEY9 
ProdomA0A029PEY9 
UniProtKBA0A064TA34RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A064TA34 
PFAMA0A064TA34 
ProdomA0A064TA34 
UniProtKBA0A070CI46RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070CI46 
PFAMA0A070CI46 
ProdomA0A070CI46 
UniProtKBA0A070CSF6RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070CSF6 
PFAMA0A070CSF6 
ProdomA0A070CSF6 
UniProtKBA0A070NZ38RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070NZ38 
PFAMA0A070NZ38 
ProdomA0A070NZ38 
UniProtKBA0A070SGU3RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070SGU3 
PFAMA0A070SGU3 
ProdomA0A070SGU3 
UniProtKBA0A027Y6X2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A027Y6X2 
PFAMA0A027Y6X2 
ProdomA0A027Y6X2 
UniProtKBA0A027TJ42RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A027TJ42 
PFAMA0A027TJ42 
ProdomA0A027TJ42 
UniProtKBA7ZQ34RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA7ZQ34 
PFAMA7ZQ34 
ProdomA7ZQ34 
UniProtKBB2N298SubName: Full=ATP-dependent chaperone protein ClpB;
InterProB2N298 
PFAMB2N298 
ProdomB2N298 
UniProtKBB3HZ31SubName: Full=ATP-dependent chaperone protein ClpB;
InterProB3HZ31 
PFAMB3HZ31 
ProdomB3HZ31 
UniProtKBB3I6C7SubName: Full=ATP-dependent chaperone protein ClpB;
InterProB3I6C7 
PFAMB3I6C7 
ProdomB3I6C7 
UniProtKBB3WTF6SubName: Full=ATP-dependent chaperone protein ClpB;
InterProB3WTF6 
PFAMB3WTF6 
ProdomB3WTF6 
UniProtKBB3C266SubName: Full=ATP-dependent chaperone ClpB;
InterProB3C266 
PFAMB3C266 
ProdomB3C266 
UniProtKBB7M963SubName: Full=Protein disaggregation chaperone;
InterProB7M963 
PFAMB7M963 
ProdomB7M963 
UniProtKBB6ZWM8SubName: Full=ATP-dependent chaperone ClpB;
InterProB6ZWM8 
PFAMB6ZWM8 
ProdomB6ZWM8 
UniProtKBB7MYN4RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProB7MYN4 
PFAMB7MYN4 
ProdomB7MYN4 
UniProtKBB6I5G4RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProB6I5G4 
PFAMB6I5G4 
ProdomB6I5G4 
UniProtKBA8A399SubName: Full=ATP-dependent chaperone protein ClpB;
InterProA8A399 
PFAMA8A399 
ProdomA8A399 
UniProtKBA0A070XPD4RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070XPD4 
PFAMA0A070XPD4 
ProdomA0A070XPD4 
UniProtKBA0A071AHK7RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A071AHK7 
PFAMA0A071AHK7 
ProdomA0A071AHK7 
UniProtKBA0A0E0U2I0RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E0U2I0 
PFAMA0A0E0U2I0 
ProdomA0A0E0U2I0 
UniProtKBA0A0E1M083RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E1M083 
PFAMA0A0E1M083 
ProdomA0A0E1M083 
UniProtKBA0A0E1SVF1RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E1SVF1 
PFAMA0A0E1SVF1 
ProdomA0A0E1SVF1 
UniProtKBA0A0E2THR7RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E2THR7 
PFAMA0A0E2THR7 
ProdomA0A0E2THR7 
UniProtKBA0A0E2U7F3RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E2U7F3 
PFAMA0A0E2U7F3 
ProdomA0A0E2U7F3 
UniProtKBA0A0H3PIT6SubName: Full=ATP-dependent chaperone ClpB {ECO:0000313|EMBL:EDU89310.1};
InterProA0A0H3PIT6 
PFAMA0A0H3PIT6 
ProdomA0A0H3PIT6 
UniProtKBA0A0H3X6P3SubName: Full=Protein disaggregation chaperone {ECO:0000313|EMBL:AKM36149.1};
InterProA0A0H3X6P3 
PFAMA0A0H3X6P3 
ProdomA0A0H3X6P3 
UniProtKBA0A0I4DV70SubName: Full=Protein disaggregation chaperone {ECO:0000313|EMBL:CSY95305.1};
InterProA0A0I4DV70 
PFAMA0A0I4DV70 
ProdomA0A0I4DV70 
UniProtKBA0A0J3YQZ5SubName: Full=Chaperone ClpB {ECO:0000313|EMBL:KME68620.1};
InterProA0A0J3YQZ5 
PFAMA0A0J3YQZ5 
ProdomA0A0J3YQZ5 
UniProtKBB2PCI2SubName: Full=ATP-dependent chaperone ClpB;
InterProB2PCI2 
PFAMB2PCI2 
ProdomB2PCI2 
UniProtKBA0A0A8UC31RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0A8UC31 
PFAMA0A0A8UC31 
ProdomA0A0A8UC31 
UniProtKBA0A080ITV7RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A080ITV7 
PFAMA0A080ITV7 
ProdomA0A080ITV7 
UniProtKBA0A080HXW0RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A080HXW0 
PFAMA0A080HXW0 
ProdomA0A080HXW0 
UniProtKBA0A071CLD5RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A071CLD5 
PFAMA0A071CLD5 
ProdomA0A071CLD5 
UniProtKBA0A071D3S2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A071D3S2 
PFAMA0A071D3S2 
ProdomA0A071D3S2 
UniProtKBA0A073T5L3RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A073T5L3 
PFAMA0A073T5L3 
ProdomA0A073T5L3 
UniProtKBA0A073UV97RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A073UV97 
PFAMA0A073UV97 
ProdomA0A073UV97 
UniProtKBA0A074HLV4RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A074HLV4 
PFAMA0A074HLV4 
ProdomA0A074HLV4 
UniProtKBA0A074HUQ8RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A074HUQ8 
PFAMA0A074HUQ8 
ProdomA0A074HUQ8 
UniProtKBA0A079F4C2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A079F4C2 
PFAMA0A079F4C2 
ProdomA0A079F4C2 
UniProtKBA0A079FI83RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A079FI83 
PFAMA0A079FI83 
ProdomA0A079FI83 
UniProtKBA0A079YAH7RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A079YAH7 
PFAMA0A079YAH7 
ProdomA0A079YAH7 
UniProtKBA0A080EJM7RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A080EJM7 
PFAMA0A080EJM7 
ProdomA0A080EJM7 
UniProtKBB2PE00SubName: Full=ATP-dependent chaperone ClpB;
InterProB2PE00 
PFAMB2PE00 
ProdomB2PE00 
UniProtKBB2NNC2SubName: Full=ATP-dependent chaperone ClpB;
InterProB2NNC2 
PFAMB2NNC2 
ProdomB2NNC2 
UniProtKBA0A023Z169RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A023Z169 
PFAMA0A023Z169 
ProdomA0A023Z169 
UniProtKBB7N6I0RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProB7N6I0 
PFAMB7N6I0 
ProdomB7N6I0 
UniProtKBA0A026GX74RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A026GX74 
PFAMA0A026GX74 
ProdomA0A026GX74 
UniProtKBA0A029HPE5RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A029HPE5 
PFAMA0A029HPE5 
ProdomA0A029HPE5 
UniProtKBA0A069XFN0RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A069XFN0 
PFAMA0A069XFN0 
ProdomA0A069XFN0 
UniProtKBA0A070T5W2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070T5W2 
PFAMA0A070T5W2 
ProdomA0A070T5W2 
UniProtKBA0A073GX41RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A073GX41 
PFAMA0A073GX41 
ProdomA0A073GX41 
UniProtKBA0A074J012RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A074J012 
PFAMA0A074J012 
ProdomA0A074J012 
UniProtKBA0A080FVV8RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A080FVV8 
PFAMA0A080FVV8 
ProdomA0A080FVV8 
UniProtKBA0A0E0V874RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E0V874 
PFAMA0A0E0V874 
ProdomA0A0E0V874 
UniProtKBA0A0G3HWC0SubName: Full=Protein disaggregation chaperone protein {ECO:0000313|EMBL:AKK15457.1};
InterProA0A0G3HWC0 
PFAMA0A0G3HWC0 
ProdomA0A0G3HWC0 
UniProtKBB3XIJ3SubName: Full=ATP-dependent chaperone protein ClpB;
InterProB3XIJ3 
PFAMB3XIJ3 
ProdomB3XIJ3 
UniProtKBB3AVJ9SubName: Full=ATP-dependent chaperone ClpB;
InterProB3AVJ9 
PFAMB3AVJ9 
ProdomB3AVJ9 
UniProtKBA0A0G2XC43SubName: Full=Protein disaggregation chaperone {ECO:0000313|EMBL:AKI67682.1};
InterProA0A0G2XC43 
PFAMA0A0G2XC43 
ProdomA0A0G2XC43 
UniProtKBA0A024KPU9RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A024KPU9 
PFAMA0A024KPU9 
ProdomA0A024KPU9 
UniProtKBA0A0E3MWW2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E3MWW2 
PFAMA0A0E3MWW2 
ProdomA0A0E3MWW2 
UniProtKBA0A025CSF9RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A025CSF9 
PFAMA0A025CSF9 
ProdomA0A025CSF9 
UniProtKBA0A073G4H3RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A073G4H3 
PFAMA0A073G4H3 
ProdomA0A073G4H3 
UniProtKBA0A0F6GRC5RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0F6GRC5 
PFAMA0A0F6GRC5 
ProdomA0A0F6GRC5 
UniProtKBB3HJ50RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProB3HJ50 
PFAMB3HJ50 
ProdomB3HJ50 
UniProtKBA0A025FX60RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A025FX60 
PFAMA0A025FX60 
ProdomA0A025FX60 
UniProtKBA0A069WW37RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A069WW37 
PFAMA0A069WW37 
ProdomA0A069WW37 
UniProtKBA0A073GLT2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A073GLT2 
PFAMA0A073GLT2 
ProdomA0A073GLT2 
UniProtKBA0A080F110RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A080F110 
PFAMA0A080F110 
ProdomA0A080F110 
UniProtKBB1XBR5SubName: Full=Protein disaggregation chaperone;
InterProB1XBR5 
PFAMB1XBR5 
ProdomB1XBR5 
UniProtKBB3B3P9SubName: Full=ATP-dependent chaperone ClpB;
InterProB3B3P9 
PFAMB3B3P9 
ProdomB3B3P9 
UniProtKBA0A073H1I2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A073H1I2 
PFAMA0A073H1I2 
ProdomA0A073H1I2 
UniProtKBA0A073V342RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A073V342 
PFAMA0A073V342 
ProdomA0A073V342 
UniProtKBA0A079CWU3RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A079CWU3 
PFAMA0A079CWU3 
ProdomA0A079CWU3 
UniProtKBA0A079GMP9RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A079GMP9 
PFAMA0A079GMP9 
ProdomA0A079GMP9 
UniProtKBA0A080GQJ7RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A080GQJ7 
PFAMA0A080GQJ7 
ProdomA0A080GQJ7 
UniProtKBA0A0A0FFF5RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0A0FFF5 
PFAMA0A0A0FFF5 
ProdomA0A0A0FFF5 
UniProtKBA0A0E0XX19RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E0XX19 
PFAMA0A0E0XX19 
ProdomA0A0E0XX19 
UniProtKBA0A0E1ZSB3RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A0E1ZSB3 
PFAMA0A0E1ZSB3 
ProdomA0A0E1ZSB3 
UniProtKBA0A0H3MJI2SubName: Full=Protein disaggregation chaperone {ECO:0000313|EMBL:CAR18919.1};
InterProA0A0H3MJI2 
PFAMA0A0H3MJI2 
ProdomA0A0H3MJI2 
UniProtKBA0A0H4SGU4SubName: Full=Protein disaggregation chaperone {ECO:0000313|EMBL:AKP85403.1};
InterProA0A0H4SGU4 
PFAMA0A0H4SGU4 
ProdomA0A0H4SGU4 
UniProtKBA0A071BSD2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A071BSD2 
PFAMA0A071BSD2 
ProdomA0A071BSD2 
UniProtKBA0A070UWS0RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070UWS0 
PFAMA0A070UWS0 
ProdomA0A070UWS0 
UniProtKBA0A070FNT3RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A070FNT3 
PFAMA0A070FNT3 
ProdomA0A070FNT3 
UniProtKBB1IVN9SubName: Full=ATP-dependent chaperone ClpB;
InterProB1IVN9 
PFAMB1IVN9 
ProdomB1IVN9 
UniProtKBB5Z164SubName: Full=ATP-dependent chaperone ClpB;
InterProB5Z164 
PFAMB5Z164 
ProdomB5Z164 
UniProtKBB7LDI2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProB7LDI2 
PFAMB7LDI2 
ProdomB7LDI2 
UniProtKBB3BMZ0SubName: Full=ATP-dependent chaperone ClpB;
InterProB3BMZ0 
PFAMB3BMZ0 
ProdomB3BMZ0 
UniProtKBA0A026UE37RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A026UE37 
PFAMA0A026UE37 
ProdomA0A026UE37 
UniProtKBA0A027ZL08RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A027ZL08 
PFAMA0A027ZL08 
ProdomA0A027ZL08 
UniProtKBA0A029IMA0RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A029IMA0 
PFAMA0A029IMA0 
ProdomA0A029IMA0 
UniProtKBA0A029M3H8RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A029M3H8 
PFAMA0A029M3H8 
ProdomA0A029M3H8 
UniProtKBA0A069YSA2RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProA0A069YSA2 
PFAMA0A069YSA2 
ProdomA0A069YSA2 
UniProtKBB1LPA1RecName: Full=Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034};
InterProB1LPA1 
PFAMB1LPA1 
ProdomB1LPA1