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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A017JDB5
Original Database ID ref YP_588474.1
Organism Escherichia coli, Escherichia fergusonii, etc.
Annotation subname: full=uncharacterized
protein {eco:0000313|embl:eyd96971.1};
Sequence Length 57

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region4-50
Protein Length57
Template PDB Code1xqfA
Template Region125-200
Sequence Identity38%
E-Value0.38
GA3410.02
MPQS0.560061
z-DOPE2.97
TSVMod MethodMSALL
TSVMod RMSD8.082
TSVMod NO350.353
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1xqfthe mechanism of ammonia transport based on the crystal structure of amtb of e. coli.
DBALI1xqfA 
JenaImageLibrary1xqf 
Target Sequence
UniProtKBB3XCP8SubName: Full=Putative uncharacterized protein;
InterProB3XCP8 
PFAMB3XCP8 
ProdomB3XCP8 
UniProtKBA0A064T173SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDG88664.1};
InterProA0A064T173 
PFAMA0A064T173 
ProdomA0A064T173 
UniProtKBA0A069X0G7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU23309.1};
InterProA0A069X0G7 
PFAMA0A069X0G7 
ProdomA0A069X0G7 
UniProtKBA0A070K975SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW27275.1};
InterProA0A070K975 
PFAMA0A070K975 
ProdomA0A070K975 
UniProtKBA0A070P6I2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW75630.1};
InterProA0A070P6I2 
PFAMA0A070P6I2 
ProdomA0A070P6I2 
UniProtKBA0A070UML0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX42774.1};
InterProA0A070UML0 
PFAMA0A070UML0 
ProdomA0A070UML0 
UniProtKBA0A070YCG4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX88816.1};
InterProA0A070YCG4 
PFAMA0A070YCG4 
ProdomA0A070YCG4 
UniProtKBA0A071D6T4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ36807.1};
InterProA0A071D6T4 
PFAMA0A071D6T4 
ProdomA0A071D6T4 
UniProtKBA0A073FLA1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ43289.1};
InterProA0A073FLA1 
PFAMA0A073FLA1 
ProdomA0A073FLA1 
UniProtKBA0A073GIZ0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ64657.1};
InterProA0A073GIZ0 
PFAMA0A073GIZ0 
ProdomA0A073GIZ0 
UniProtKBA0A073H0B0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ70829.1};
InterProA0A073H0B0 
PFAMA0A073H0B0 
ProdomA0A073H0B0 
UniProtKBA0A029P183SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK16084.1};
InterProA0A029P183 
PFAMA0A029P183 
ProdomA0A029P183 
UniProtKBA0A029LQH5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ87202.1};
InterProA0A029LQH5 
PFAMA0A029LQH5 
ProdomA0A029LQH5 
UniProtKBA7ZUZ8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ABV19881.1};
InterProA7ZUZ8 
PFAMA7ZUZ8 
ProdomA7ZUZ8 
UniProtKBB3I3G7SubName: Full=Putative uncharacterized protein;
InterProB3I3G7 
PFAMB3I3G7 
ProdomB3I3G7 
UniProtKBB7MRD3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR10821.1};
InterProB7MRD3 
PFAMB7MRD3 
ProdomB7MRD3 
UniProtKBB7NG65SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR15777.1};
InterProB7NG65 
PFAMB7NG65 
ProdomB7NG65 
UniProtKBB7NSU1SubName: Full=Uncharacterized protein;
InterProB7NSU1 
PFAMB7NSU1 
ProdomB7NSU1 
UniProtKBB7LBT0SubName: Full=YjdO protein {ECO:0000313|EMBL:CAV01468.1};
InterProB7LBT0 
PFAMB7LBT0 
ProdomB7LBT0 
UniProtKBC6ECZ6SubName: Full=Uncharacterized protein YjdO {ECO:0000313|EMBL:ACT30889.1};
InterProC6ECZ6 
PFAMC6ECZ6 
ProdomC6ECZ6 
UniProtKBC5A1C1SubName: Full=Predicted protein;
InterProC5A1C1 
PFAMC5A1C1 
ProdomC5A1C1 
UniProtKBC6V330SubName: Full=Uncharacterized protein;
InterProC6V330 
PFAMC6V330 
ProdomC6V330 
UniProtKBC2DT69SubName: Full=Uncharacterized protein;
InterProC2DT69 
PFAMC2DT69 
ProdomC2DT69 
UniProtKBA8A7M5SubName: Full=Putative uncharacterized protein;
InterProA8A7M5 
PFAMA8A7M5 
ProdomA8A7M5 
UniProtKBA0A073W0K5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL85537.1};
InterProA0A073W0K5 
PFAMA0A073W0K5 
ProdomA0A073W0K5 
UniProtKBA0A074I1Q9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN94091.1};
InterProA0A074I1Q9 
PFAMA0A074I1Q9 
ProdomA0A074I1Q9 
UniProtKBA0A0G3KH51SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK51066.1};
InterProA0A0G3KH51 
PFAMA0A0G3KH51 
ProdomA0A0G3KH51 
UniProtKBA0A0H3PWE3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU93420.1};
InterProA0A0H3PWE3 
PFAMA0A0H3PWE3 
ProdomA0A0H3PWE3 
UniProtKBA0A0H4S5M3SubName: Full=YjdO protein {ECO:0000313|EMBL:AKP87166.1};
InterProA0A0H4S5M3 
PFAMA0A0H4S5M3 
ProdomA0A0H4S5M3 
UniProtKBA0A0J3WHN9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KME77322.1};
InterProA0A0J3WHN9 
PFAMA0A0J3WHN9 
ProdomA0A0J3WHN9 
UniProtKBB2NQW2SubName: Full=Putative uncharacterized protein;
InterProB2NQW2 
PFAMB2NQW2 
ProdomB2NQW2 
UniProtKBB1XD09SubName: Full=Predicted protein;
InterProB1XD09 
PFAMB1XD09 
ProdomB1XD09 
UniProtKBB3BTG4SubName: Full=Putative uncharacterized protein;
InterProB3BTG4 
PFAMB3BTG4 
ProdomB3BTG4 
UniProtKBB3BB03SubName: Full=Putative uncharacterized protein;
InterProB3BB03 
PFAMB3BB03 
ProdomB3BB03 
UniProtKBB3HVS0SubName: Full=Putative uncharacterized protein;
InterProB3HVS0 
PFAMB3HVS0 
ProdomB3HVS0 
UniProtKBB3WJ61SubName: Full=Putative uncharacterized protein;
InterProB3WJ61 
PFAMB3WJ61 
ProdomB3WJ61 
UniProtKBA0A0G3JKD0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK41688.1};
InterProA0A0G3JKD0 
PFAMA0A0G3JKD0 
ProdomA0A0G3JKD0 
UniProtKBA0A0G2SIX5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJM76399.1};
InterProA0A0G2SIX5 
PFAMA0A0G2SIX5 
ProdomA0A0G2SIX5 
UniProtKBA0A0F6GVW2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI57557.1};
InterProA0A0F6GVW2 
PFAMA0A0F6GVW2 
ProdomA0A0F6GVW2 
UniProtKBA0A074IVY8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO05592.1};
InterProA0A074IVY8 
PFAMA0A074IVY8 
ProdomA0A074IVY8 
UniProtKBA0A079DD32SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY20073.1};
InterProA0A079DD32 
PFAMA0A079DD32 
ProdomA0A079DD32 
UniProtKBA0A080EGX6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN42032.1};
InterProA0A080EGX6 
PFAMA0A080EGX6 
ProdomA0A080EGX6 
UniProtKBA0A080ELC2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN49850.1};
InterProA0A080ELC2 
PFAMA0A080ELC2 
ProdomA0A080ELC2 
UniProtKBA0A080GMQ7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN81900.1};
InterProA0A080GMQ7 
PFAMA0A080GMQ7 
ProdomA0A080GMQ7 
UniProtKBA0A080I6I8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO24806.1};
InterProA0A080I6I8 
PFAMA0A080I6I8 
ProdomA0A080I6I8 
UniProtKBA0A0E0VD48SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEQ15517.1};
InterProA0A0E0VD48 
PFAMA0A0E0VD48 
ProdomA0A0E0VD48 
UniProtKBA0A0E0Y529SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS76493.1};
InterProA0A0E0Y529 
PFAMA0A0E0Y529 
ProdomA0A0E0Y529 
UniProtKBA0A0E1SRE5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU62060.1};
InterProA0A0E1SRE5 
PFAMA0A0E1SRE5 
ProdomA0A0E1SRE5 
UniProtKBA0A0E2A0D2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL39733.1};
InterProA0A0E2A0D2 
PFAMA0A0E2A0D2 
ProdomA0A0E2A0D2 
UniProtKBB3WYX5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDX35610.1};
InterProB3WYX5 
PFAMB3WYX5 
ProdomB3WYX5 
UniProtKBB3IGX2SubName: Full=Putative uncharacterized protein;
InterProB3IGX2 
PFAMB3IGX2 
ProdomB3IGX2 
UniProtKBA0A017JDB5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYD96971.1};
InterProA0A017JDB5 
PFAMA0A017JDB5 
ProdomA0A017JDB5 
UniProtKBC9QU70SubName: Full=Putative inner membrane protein;SubName: Full=Uncharacterized protein;
InterProC9QU70 
PFAMC9QU70 
ProdomC9QU70 
UniProtKBA0A029JYS8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ65999.1};
InterProA0A029JYS8 
PFAMA0A029JYS8 
ProdomA0A029JYS8 
UniProtKBA0A069XW59SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU31848.1};
InterProA0A069XW59 
PFAMA0A069XW59 
ProdomA0A069XW59 
UniProtKBA0A071BTM9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY85561.1};
InterProA0A071BTM9 
PFAMA0A071BTM9 
ProdomA0A071BTM9 
UniProtKBA0A073TFV4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL26464.1};
InterProA0A073TFV4 
PFAMA0A073TFV4 
ProdomA0A073TFV4 
UniProtKBA0A079HC48SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY98746.1};
InterProA0A079HC48 
PFAMA0A079HC48 
ProdomA0A079HC48 
UniProtKBA0A0A8UL90SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK08262.1};
InterProA0A0A8UL90 
PFAMA0A0A8UL90 
ProdomA0A0A8UL90 
UniProtKBA0A0E3N4P1SubName: Full=Uncharacterized protein YjdO {ECO:0000313|EMBL:AKA93292.1};
InterProA0A0E3N4P1 
PFAMA0A0E3N4P1 
ProdomA0A0E3N4P1 
UniProtKBA0A0H3EQ76SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADR29550.1};
InterProA0A0H3EQ76 
PFAMA0A0H3EQ76 
ProdomA0A0H3EQ76 
UniProtKBB3AHF5SubName: Full=Putative uncharacterized protein;
InterProB3AHF5 
PFAMB3AHF5 
ProdomB3AHF5 
UniProtKBC1HQI4SubName: Full=Uncharacterized protein;
InterProC1HQI4 
PFAMC1HQI4 
ProdomC1HQI4 
UniProtKBB5Z2D9SubName: Full=Uncharacterized protein;
InterProB5Z2D9 
PFAMB5Z2D9 
ProdomB5Z2D9 
UniProtKBB3A6G2SubName: Full=Putative uncharacterized protein;
InterProB3A6G2 
PFAMB3A6G2 
ProdomB3A6G2 
UniProtKBA0A023Z7B6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AHY73784.1};
InterProA0A023Z7B6 
PFAMA0A023Z7B6 
ProdomA0A023Z7B6 
UniProtKBB2P2M4SubName: Full=Putative uncharacterized protein;
InterProB2P2M4 
PFAMB2P2M4 
ProdomB2P2M4 
UniProtKBA0A029HCX1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ34144.1};
InterProA0A029HCX1 
PFAMA0A029HCX1 
ProdomA0A029HCX1 
UniProtKBA0A079F8R6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY50801.1};
InterProA0A079F8R6 
PFAMA0A079F8R6 
ProdomA0A079F8R6 
UniProtKBB2N237SubName: Full=Putative uncharacterized protein;
InterProB2N237 
PFAMB2N237 
ProdomB2N237 
UniProtKBB7M8N9SubName: Full=Uncharacterized protein;
InterProB7M8N9 
PFAMB7M8N9 
ProdomB7M8N9 
UniProtKBA0A029IH00SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ47830.1};
InterProA0A029IH00 
PFAMA0A029IH00 
ProdomA0A029IH00 
UniProtKBA0A071AS56SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY57694.1};
InterProA0A071AS56 
PFAMA0A071AS56 
ProdomA0A071AS56 
UniProtKBA0A079FVS2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY66068.1};
InterProA0A079FVS2 
PFAMA0A079FVS2 
ProdomA0A079FVS2 
UniProtKBA0A0E2KY16SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EQX22831.1};
InterProA0A0E2KY16 
PFAMA0A0E2KY16 
ProdomA0A0E2KY16 
UniProtKBB3B077SubName: Full=Putative uncharacterized protein;
InterProB3B077 
PFAMB3B077 
ProdomB3B077 
UniProtKBB6I600SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG79951.1};
InterProB6I600 
PFAMB6I600 
ProdomB6I600 
UniProtKBA0A079Y154SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ53852.1};
InterProA0A079Y154 
PFAMA0A079Y154 
ProdomA0A079Y154 
UniProtKBA0A080GEM4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN85105.1};
InterProA0A080GEM4 
PFAMA0A080GEM4 
ProdomA0A080GEM4 
UniProtKBA0A0E0U6P7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE59471.1};
InterProA0A0E0U6P7 
PFAMA0A0E0U6P7 
ProdomA0A0E0U6P7 
UniProtKBA0A0E1M4M4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJF58971.1};
InterProA0A0E1M4M4 
PFAMA0A0E1M4M4 
ProdomA0A0E1M4M4 
UniProtKBA0A0F6FFT9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJA29279.1};
InterProA0A0F6FFT9 
PFAMA0A0F6FFT9 
ProdomA0A0F6FFT9 
UniProtKBA0A0G3J517SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK35734.1};
InterProA0A0G3J517 
PFAMA0A0G3J517 
ProdomA0A0G3J517 
UniProtKBA0A0H3MWW9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR20657.1};
InterProA0A0H3MWW9 
PFAMA0A0H3MWW9 
ProdomA0A0H3MWW9 
UniProtKBA0A0I4Y165SubName: Full=Protein of uncharacterised function (DUF2566) {ECO:0000313|EMBL:CTB65287.1};
InterProA0A0I4Y165 
PFAMA0A0I4Y165 
ProdomA0A0I4Y165 
UniProtKBB2PJJ5SubName: Full=Putative uncharacterized protein;
InterProB2PJJ5 
PFAMB2PJJ5 
ProdomB2PJJ5 
UniProtKBB3H9L9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIF62516.1};
InterProB3H9L9 
PFAMB3H9L9 
ProdomB3H9L9 
UniProtKBA0A074I620SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN95696.1};
InterProA0A074I620 
PFAMA0A074I620 
ProdomA0A074I620 
UniProtKBA0A073UWB2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL72026.1};
InterProA0A073UWB2 
PFAMA0A073UWB2 
ProdomA0A073UWB2 
UniProtKBA0A073G5A2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEJ56409.1};
InterProA0A073G5A2 
PFAMA0A073G5A2 
ProdomA0A073G5A2 
UniProtKBB1ITT3SubName: Full=Putative inner membrane protein;
InterProB1ITT3 
PFAMB1ITT3 
ProdomB1ITT3 
UniProtKBC1NB19SubName: Full=Putative uncharacterized protein;
InterProC1NB19 
PFAMC1NB19 
ProdomC1NB19 
UniProtKBC5W5H8SubName: Full=Uncharacterized protein YjdO {ECO:0000313|EMBL:ACT30889.1};
InterProC5W5H8 
PFAMC5W5H8 
ProdomC5W5H8 
UniProtKBB6ZV13SubName: Full=Uncharacterized protein;
InterProB6ZV13 
PFAMB6ZV13 
ProdomB6ZV13 
UniProtKBA0A029L675SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ80963.1};
InterProA0A029L675 
PFAMA0A029L675 
ProdomA0A029L675 
UniProtKBA0A062Y4U9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDA55406.1};
InterProA0A062Y4U9 
PFAMA0A062Y4U9 
ProdomA0A062Y4U9 
UniProtKBA0A069Z4I4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU54345.1};
InterProA0A069Z4I4 
PFAMA0A069Z4I4 
ProdomA0A069Z4I4 
UniProtKBA0A070PS04SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDW82895.1};
InterProA0A070PS04 
PFAMA0A070PS04 
ProdomA0A070PS04 
UniProtKBA0A071CKB7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ19349.1};
InterProA0A071CKB7 
PFAMA0A071CKB7 
ProdomA0A071CKB7 
UniProtKBB1LQF0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACB18445.1};
InterProB1LQF0 
PFAMB1LQF0 
ProdomB1LQF0