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Sequence Information

Primary Database Link A0A025GII4
Original Database ID 5IFG:B PDBID
Organism Escherichia coli, Shigella boydii, etc.
Annotation subname: full=xre family transcriptional
regulator {eco:0000313|embl:eyv64068.1}
;
Sequence Length 138

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region84-134
Protein Length138
Template PDB Code1y7yA
Template Region18-70
Sequence Identity35%
E-Value0
GA3411
MPQS0.902565
z-DOPE-1.5
TSVMod MethodMTALL
TSVMod RMSD1.329
TSVMod NO350.967
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1y7yhigh-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila
DBALI1y7yA 
JenaImageLibrary1y7y 
Target Sequence
UniProtKBD7ZZD0SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK23886.1};
InterProD7ZZD0 
PFAMD7ZZD0 
ProdomD7ZZD0 
UniProtKBA0A029HJ99SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:EZJ36266.1};
InterProA0A029HJ99 
PFAMA0A029HJ99 
ProdomA0A029HJ99 
UniProtKBA0A029IKC3SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:EZJ49064.1};
InterProA0A029IKC3 
PFAMA0A029IKC3 
ProdomA0A029IKC3 
UniProtKBA0A062Y4G7SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDA56534.1};
InterProA0A062Y4G7 
PFAMA0A062Y4G7 
ProdomA0A062Y4G7 
UniProtKBA0A069XIE4SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDU27283.1};
InterProA0A069XIE4 
PFAMA0A069XIE4 
ProdomA0A069XIE4 
UniProtKBA0A069Z2V4SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDU53961.1};
InterProA0A069Z2V4 
PFAMA0A069Z2V4 
ProdomA0A069Z2V4 
UniProtKBA0A070D8A3SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:KDV36705.1};
InterProA0A070D8A3 
PFAMA0A070D8A3 
ProdomA0A070D8A3 
UniProtKBA0A070UXC8SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDX46951.1};
InterProA0A070UXC8 
PFAMA0A070UXC8 
ProdomA0A070UXC8 
UniProtKBA0A070Y9Y2SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDX87249.1};
InterProA0A070Y9Y2 
PFAMA0A070Y9Y2 
ProdomA0A070Y9Y2 
UniProtKBA0A071BU77SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDY85971.1};
InterProA0A071BU77 
PFAMA0A071BU77 
ProdomA0A071BU77 
UniProtKBA0A071CII3SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDZ18828.1};
InterProA0A071CII3 
PFAMA0A071CII3 
ProdomA0A071CII3 
UniProtKBA0A028C726SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZE31442.1};
InterProA0A028C726 
PFAMA0A028C726 
ProdomA0A028C726 
UniProtKBA0A028ABA3SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZE08105.1};
InterProA0A028ABA3 
PFAMA0A028ABA3 
ProdomA0A028ABA3 
UniProtKBB1IRN5SubName: Full=Helix-turn-helix domain protein;
InterProB1IRN5 
PFAMB1IRN5 
ProdomB1IRN5 
UniProtKBD2A806SubName: Full=Putative HTH-type transcriptional regulator ygjM {ECO:0000313|EMBL:ADA75451.1};
InterProD2A806 
PFAMD2A806 
ProdomD2A806 
UniProtKBD8E4X0SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK46886.1};
InterProD8E4X0 
PFAMD8E4X0 
ProdomD8E4X0 
UniProtKBE0R6G6SubName: Full=Putative DNA-binding transcriptional regulator;
InterProE0R6G6 
PFAME0R6G6 
ProdomE0R6G6 
UniProtKBE1HK45SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK91743.1};
InterProE1HK45 
PFAME1HK45 
ProdomE1HK45 
UniProtKBD8BY82SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFI88377.1};
InterProD8BY82 
PFAMD8BY82 
ProdomD8BY82 
UniProtKBE4P911SubName: Full=Putative DNA-binding transcriptional regulator;
InterProE4P911 
PFAME4P911 
ProdomE4P911 
UniProtKBE2QEC8SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:CEE09969.1};SubName: Full=Antitoxinof the HigB-HigA toxin-antitoxin system {ECO:0000313|EMBL:CCQ30607.2};SubName: Full=DNA-binding transcriptional regula
InterProE2QEC8 
PFAME2QEC8 
ProdomE2QEC8 
UniProtKBE6A3J2SubName: Full=DNA-binding helix-turn-helix protein;
InterProE6A3J2 
PFAME6A3J2 
ProdomE6A3J2 
UniProtKBE1PE56SubName: Full=Putative HTH-type transcriptional regulator YgjM;
InterProE1PE56 
PFAME1PE56 
ProdomE1PE56 
UniProtKBB3IFC9SubName: Full=Helix-turn-helix DNA-binding domain protein;
InterProB3IFC9 
PFAMB3IFC9 
ProdomB3IFC9 
UniProtKBA0A073GKD8SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEJ58719.1};
InterProA0A073GKD8 
PFAMA0A073GKD8 
ProdomA0A073GKD8 
UniProtKBA0A073GL15SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEJ66334.1};
InterProA0A073GL15 
PFAMA0A073GL15 
ProdomA0A073GL15 
UniProtKBA0A0H3ELP4SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:ADR28479.1};
InterProA0A0H3ELP4 
PFAMA0A0H3ELP4 
ProdomA0A0H3ELP4 
UniProtKBB3HSK6SubName: Full=Helix-turn-helix DNA-binding domain protein;
InterProB3HSK6 
PFAMB3HSK6 
ProdomB3HSK6 
UniProtKBB3HD17SubName: Full=Helix-turn-helix DNA-binding domain-containing protein {ECO:0000313|EMBL:AIF63664.1};
InterProB3HD17 
PFAMB3HD17 
ProdomB3HD17 
UniProtKBB1XG86SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XG86 
PFAMB1XG86 
ProdomB1XG86 
UniProtKBB7N085SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CAR09753.1};
InterProB7N085 
PFAMB7N085 
ProdomB7N085 
UniProtKBB6I454SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG78887.1};
InterProB6I454 
PFAMB6I454 
ProdomB6I454 
UniProtKBC8TH99SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI27361.1};
InterProC8TH99 
PFAMC8TH99 
ProdomC8TH99 
UniProtKBC6UED2SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC6UED2 
PFAMC6UED2 
ProdomC6UED2 
UniProtKBC9QYT1SubName: Full=Putative DNA-binding transcriptional regulator;SubName: Full=Putative transcription regulator with HTH domain;
InterProC9QYT1 
PFAMC9QYT1 
ProdomC9QYT1 
UniProtKBD7XZ71SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFJ99317.1};
InterProD7XZ71 
PFAMD7XZ71 
ProdomD7XZ71 
UniProtKBA0A0G3KSM2SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:AKK55597.1};
InterProA0A0G3KSM2 
PFAMA0A0G3KSM2 
ProdomA0A0G3KSM2 
UniProtKBA0A0G3I1L6SubName: Full=Antitoxinof the HigB-HigA toxin-antitoxin system protein {ECO:0000313|EMBL:AKK18865.1};
InterProA0A0G3I1L6 
PFAMA0A0G3I1L6 
ProdomA0A0G3I1L6 
UniProtKBA0A0F6MGW8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EID63422.1};
InterProA0A0F6MGW8 
PFAMA0A0F6MGW8 
ProdomA0A0F6MGW8 
UniProtKBA0A073W4B6SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEL87136.1};
InterProA0A073W4B6 
PFAMA0A073W4B6 
ProdomA0A073W4B6 
UniProtKBA0A074HU40SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEN97881.1};
InterProA0A074HU40 
PFAMA0A074HU40 
ProdomA0A074HU40 
UniProtKBA0A079FU73SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDY61831.1};
InterProA0A079FU73 
PFAMA0A079FU73 
ProdomA0A079FU73 
UniProtKBA0A079H3H2SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDY97994.1};
InterProA0A079H3H2 
PFAMA0A079H3H2 
ProdomA0A079H3H2 
UniProtKBA0A080GHM8SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEN88176.1};
InterProA0A080GHM8 
PFAMA0A080GHM8 
ProdomA0A080GHM8 
UniProtKBA0A080HYS5SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEO22076.1};
InterProA0A080HYS5 
PFAMA0A080HYS5 
ProdomA0A080HYS5 
UniProtKBA0A0C7MQR5SubName: Full=Helix-turn-helix DNA-binding domain-containing protein {ECO:0000313|EMBL:CEP57835.1};
InterProA0A0C7MQR5 
PFAMA0A0C7MQR5 
ProdomA0A0C7MQR5 
UniProtKBA0A0E0U451SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:AEE58372.1};
InterProA0A0E0U451 
PFAMA0A0E0U451 
ProdomA0A0E0U451 
UniProtKBA0A0E1M3H6SubName: Full=Antitoxinof the HigB-HigA toxin-antitoxin system {ECO:0000313|EMBL:AJF57903.1};
InterProA0A0E1M3H6 
PFAMA0A0E1M3H6 
ProdomA0A0E1M3H6 
UniProtKBA0A0E1SRF2SubName: Full=Helix-turn-helix DNA-binding domain protein {ECO:0000313|EMBL:EDU62070.1};
InterProA0A0E1SRF2 
PFAMA0A0E1SRF2 
ProdomA0A0E1SRF2 
UniProtKBD7YTC0SubName: Full=DNA-binding helix-turn-helix protein;
InterProD7YTC0 
PFAMD7YTC0 
ProdomD7YTC0 
UniProtKBD7XRS3SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFJ85909.1};
InterProD7XRS3 
PFAMD7XRS3 
ProdomD7XRS3 
UniProtKBA7ZRW5SubName: Full=Helix-turn-helix DNA-binding domain protein {ECO:0000313|EMBL:ABV18202.1};
InterProA7ZRW5 
PFAMA7ZRW5 
ProdomA7ZRW5 
UniProtKBE6B4X1SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:EFU97767.1};
InterProE6B4X1 
PFAME6B4X1 
ProdomE6B4X1 
UniProtKBA0A026VAV7SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZA39078.1};
InterProA0A026VAV7 
PFAMA0A026VAV7 
ProdomA0A026VAV7 
UniProtKBA0A029KDB8SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:EZJ70732.1};
InterProA0A029KDB8 
PFAMA0A029KDB8 
ProdomA0A029KDB8 
UniProtKBA0A070KLR7SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDW29498.1};
InterProA0A070KLR7 
PFAMA0A070KLR7 
ProdomA0A070KLR7 
UniProtKBA0A071DQ57SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDZ38710.1};
InterProA0A071DQ57 
PFAMA0A071DQ57 
ProdomA0A071DQ57 
UniProtKBA0A079DMJ8SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDY24082.1};
InterProA0A079DMJ8 
PFAMA0A079DMJ8 
ProdomA0A079DMJ8 
UniProtKBA0A094NQ54SubName: Full=Helix-turn-helix DNA-binding domain-containing protein,Antitoxin HigA,Predicted transcription regulator containing HTH domain,Helix-turn-helix domain {ECO:0000313|EMBL:CDX08512.1};
InterProA0A094NQ54 
PFAMA0A094NQ54 
ProdomA0A094NQ54 
UniProtKBA0A0E2TU42SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EYV13875.1};
InterProA0A0E2TU42 
PFAMA0A0E2TU42 
ProdomA0A0E2TU42 
UniProtKBA0A0H3X825SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:AKM36634.1};
InterProA0A0H3X825 
PFAMA0A0H3X825 
ProdomA0A0H3X825 
UniProtKBC5W934SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT27729.1};
InterProC5W934 
PFAMC5W934 
ProdomC5W934 
UniProtKBE1IL25SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFO59868.1};
InterProE1IL25 
PFAME1IL25 
ProdomE1IL25 
UniProtKBD8ATB2SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK13617.1};
InterProD8ATB2 
PFAMD8ATB2 
ProdomD8ATB2 
UniProtKBC4ZQZ8SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZQZ8 
PFAMC4ZQZ8 
ProdomC4ZQZ8 
UniProtKBA0A025GII4SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EYV64068.1};
InterProA0A025GII4 
PFAMA0A025GII4 
ProdomA0A025GII4 
UniProtKBC1NE62SubName: Full=Helix-turn-helix DNA-binding domain-containing protein;
InterProC1NE62 
PFAMC1NE62 
ProdomC1NE62 
UniProtKBA0A026H1Y5SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EYY76947.1};
InterProA0A026H1Y5 
PFAMA0A026H1Y5 
ProdomA0A026H1Y5 
UniProtKBA0A074I5J0SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEN95498.1};
InterProA0A074I5J0 
PFAMA0A074I5J0 
ProdomA0A074I5J0 
UniProtKBB7LH16SubName: Full=YgjM protein {ECO:0000313|EMBL:CAU99647.1};
InterProB7LH16 
PFAMB7LH16 
ProdomB7LH16 
UniProtKBD8CCS4SubName: Full=DNA-binding helix-turn-helix protein;
InterProD8CCS4 
PFAMD8CCS4 
ProdomD8CCS4 
UniProtKBA0A026RSU5SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EYZ96130.1};
InterProA0A026RSU5 
PFAMA0A026RSU5 
ProdomA0A026RSU5 
UniProtKBA0A070FCE0SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:KDV63545.1};
InterProA0A070FCE0 
PFAMA0A070FCE0 
ProdomA0A070FCE0 
UniProtKBA0A074IFS0SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEO07712.1};
InterProA0A074IFS0 
PFAMA0A074IFS0 
ProdomA0A074IFS0 
UniProtKBA0A0E1ZRC7SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:EIL31008.1};
InterProA0A0E1ZRC7 
PFAMA0A0E1ZRC7 
ProdomA0A0E1ZRC7 
UniProtKBC6EHR4SubName: Full=Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT27729.1};
InterProC6EHR4 
PFAMC6EHR4 
ProdomC6EHR4 
UniProtKBD8B8D9SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFJ64653.1};
InterProD8B8D9 
PFAMD8B8D9 
ProdomD8B8D9 
UniProtKBA0A079F967SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDY52635.1};
InterProA0A079F967 
PFAMA0A079F967 
ProdomA0A079F967 
UniProtKBA0A080FRA4SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEN65223.1};
InterProA0A080FRA4 
PFAMA0A080FRA4 
ProdomA0A080FRA4 
UniProtKBA0A0A8UHH8SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CEK06971.1};
InterProA0A0A8UHH8 
PFAMA0A0A8UHH8 
ProdomA0A0A8UHH8 
UniProtKBA0A0E0XTW3SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AFS72638.1};
InterProA0A0E0XTW3 
PFAMA0A0E0XTW3 
ProdomA0A0E0XTW3 
UniProtKBA0A0E3MXJ2SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:AKA92269.1};
InterProA0A0E3MXJ2 
PFAMA0A0E3MXJ2 
ProdomA0A0E3MXJ2 
UniProtKBA0A0G3JHD8SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:AKK40628.1};
InterProA0A0G3JHD8 
PFAMA0A0G3JHD8 
ProdomA0A0G3JHD8 
UniProtKBA0A0H4S2S4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP86056.1};
InterProA0A0H4S2S4 
PFAMA0A0H4S2S4 
ProdomA0A0H4S2S4 
UniProtKBB2NBJ5SubName: Full=Helix-turn-helix DNA-binding domain protein;
InterProB2NBJ5 
PFAMB2NBJ5 
ProdomB2NBJ5 
UniProtKBC2DVZ5SubName: Full=DNA-binding helix-turn-helix protein;
InterProC2DVZ5 
PFAMC2DVZ5 
ProdomC2DVZ5 
UniProtKBC8UG40SubName: Full=Predicted DNA-binding transcriptional regulator {ECO:0000313|EMBL:BAI37684.1};
InterProC8UG40 
PFAMC8UG40 
ProdomC8UG40 
UniProtKBA0A073TGN6SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEL28072.1};
InterProA0A073TGN6 
PFAMA0A073TGN6 
ProdomA0A073TGN6 
UniProtKBA0A073FS28SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KEJ44819.1};
InterProA0A073FS28 
PFAMA0A073FS28 
ProdomA0A073FS28 
UniProtKBA0A071AJG2SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDY61010.1};
InterProA0A071AJG2 
PFAMA0A071AJG2 
ProdomA0A071AJG2 
UniProtKBB3WXI7SubName: Full=Helix-turn-helix DNA-binding domain protein {ECO:0000313|EMBL:EDX36237.1};
InterProB3WXI7 
PFAMB3WXI7 
ProdomB3WXI7 
UniProtKBE1J0Q0SubName: Full=DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFK70613.1};
InterProE1J0Q0 
PFAME1J0Q0 
ProdomE1J0Q0 
UniProtKBE3PJZ6SubName: Full=Putative DNA-binding protein {ECO:0000313|EMBL:CBJ02852.1};
InterProE3PJZ6 
PFAME3PJZ6 
ProdomE3PJZ6 
UniProtKBD8BDN2SubName: Full=DNA-binding helix-turn-helix protein;
InterProD8BDN2 
PFAMD8BDN2 
ProdomD8BDN2 
UniProtKBA0A027U0B3SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZD30985.1};
InterProA0A027U0B3 
PFAMA0A027U0B3 
ProdomA0A027U0B3 
UniProtKBA0A028ECU7SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:EZE58032.1};
InterProA0A028ECU7 
PFAMA0A028ECU7 
ProdomA0A028ECU7 
UniProtKBA0A029LZ39SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:EZJ90619.1};
InterProA0A029LZ39 
PFAMA0A029LZ39 
ProdomA0A029LZ39 
UniProtKBA0A069XQR3SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDU32592.1};
InterProA0A069XQR3 
PFAMA0A069XQR3 
ProdomA0A069XQR3 
UniProtKBA0A070T7M7SubName: Full=Antitoxin HigA {ECO:0000313|EMBL:KDX22063.1};
InterProA0A070T7M7 
PFAMA0A070T7M7 
ProdomA0A070T7M7 
UniProtKBB3XJR2SubName: Full=Helix-turn-helix DNA-binding domain protein;
InterProB3XJR2 
PFAMB3XJR2 
ProdomB3XJR2