University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P69435
Original Database ID ref NP_415543.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=poly-beta-1,6-n-acetyl-d-glucosamine
export protein;short=pga expo
rt protein;short=poly-beta-1,6-glcnac
export protein;flags: precursor
...
Sequence Length 807

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region513-807
Protein Length807
Template PDB Code4y25A
Template Region513-807
Sequence Identity100%
E-Value0
GA3411
MPQS1.39535
z-DOPE0.43
TSVMod MethodMSRED
TSVMod RMSD13.569
TSVMod NO350.417
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4y25
DBALI4y25A 
JenaImageLibrary4y25 
Target Sequence
UniProtKBC5W304SubName: Full=Biofilm PGA synthesis protein PgaA {ECO:0000313|EMBL:ACT29592.1};
InterProC5W304 
PFAMC5W304 
ProdomC5W304 
UniProtKBA0A0E1T0N9SubName: Full=Biofilm PGA synthesis protein PgaA {ECO:0000313|EMBL:EDU65353.1};
InterProA0A0E1T0N9 
PFAMA0A0E1T0N9 
ProdomA0A0E1T0N9 
UniProtKBA0A0E2U6K3SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:EZE25648.1};
InterProA0A0E2U6K3 
PFAMA0A0E2U6K3 
ProdomA0A0E2U6K3 
UniProtKBA0A0G3HIM2SubName: Full=Biofilm adhesin polysaccharide PGA export, putative OM protein {ECO:0000313|EMBL:AKK13156.1};
InterProA0A0G3HIM2 
PFAMA0A0G3HIM2 
ProdomA0A0G3HIM2 
UniProtKBA0A0H3PJI8SubName: Full=Biofilm PGA synthesis protein PgaA {ECO:0000313|EMBL:EDU89846.1};
InterProA0A0H3PJI8 
PFAMA0A0H3PJI8 
ProdomA0A0H3PJI8 
UniProtKBE7TM21SubName: Full=Biofilm PGA outer membrane secretin PgaA;
InterProE7TM21 
PFAME7TM21 
ProdomE7TM21 
UniProtKBE2KXI4SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProE2KXI4 
PFAME2KXI4 
ProdomE2KXI4 
UniProtKBE2KG03SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProE2KG03 
PFAME2KG03 
ProdomE2KG03 
UniProtKBE8Y206SubName: Full=Tetratricopeptide repeat {ECO:0000313|EMBL:ADX51401.1};
InterProE8Y206 
PFAME8Y206 
ProdomE8Y206 
UniProtKBE8JCV3SubName: Full=Outer membrane protein PgaA;
InterProE8JCV3 
PFAME8JCV3 
ProdomE8JCV3 
UniProtKBE9WD79SubName: Full=Tetratricopeptide;
InterProE9WD79 
PFAME9WD79 
ProdomE9WD79 
UniProtKBA0A074IRG6SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:KEO03195.1};
InterProA0A074IRG6 
PFAMA0A074IRG6 
ProdomA0A074IRG6 
UniProtKBA0A073T719SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:KEL21955.1};
InterProA0A073T719 
PFAMA0A073T719 
ProdomA0A073T719 
UniProtKBE0IZ20SubName: Full=Outer membrane protein PgaA {ECO:0000313|EMBL:AFH10772.1};SubName: Full=Predicted outer membrane protein {ECO:0000313|EMBL:ADT74633.1};
InterProE0IZ20 
PFAME0IZ20 
ProdomE0IZ20 
UniProtKBI2PAL8SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein;
InterProI2PAL8 
PFAMI2PAL8 
ProdomI2PAL8 
UniProtKBI2YHQ7SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA;
InterProI2YHQ7 
PFAMI2YHQ7 
ProdomI2YHQ7 
UniProtKBC6UFD4SubName: Full=Predicted outer membrane protein;
InterProC6UFD4 
PFAMC6UFD4 
ProdomC6UFD4 
UniProtKBC8U5I4SubName: Full=Predicted outer membrane protein {ECO:0000313|EMBL:BAI29913.1};
InterProC8U5I4 
PFAMC8U5I4 
ProdomC8U5I4 
UniProtKBI2VC87SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA;
InterProI2VC87 
PFAMI2VC87 
ProdomI2VC87 
UniProtKBD7YLB6SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EFK01896.1};
InterProD7YLB6 
PFAMD7YLB6 
ProdomD7YLB6 
UniProtKBI4NX40SubName: Full=Outer membrane protein PgaA;
InterProI4NX40 
PFAMI4NX40 
ProdomI4NX40 
UniProtKBD8AYL7SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EFJ68068.1};
InterProD8AYL7 
PFAMD8AYL7 
ProdomD8AYL7 
UniProtKBI4J2U9SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:EIF83558.1};
InterProI4J2U9 
PFAMI4J2U9 
ProdomI4J2U9 
UniProtKBH5KBY5SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH5KBY5 
PFAMH5KBY5 
ProdomH5KBY5 
UniProtKBE8IJP8SubName: Full=Outer membrane protein PgaA;
InterProE8IJP8 
PFAME8IJP8 
ProdomE8IJP8 
UniProtKBE2JWC6SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProE2JWC6 
PFAME2JWC6 
ProdomE2JWC6 
UniProtKBH5IYW0SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin {ECO:0000313|EMBL:EHX32993.1};
InterProH5IYW0 
PFAMH5IYW0 
ProdomH5IYW0 
UniProtKBB2PKS0SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB2PKS0 
PFAMB2PKS0 
ProdomB2PKS0 
UniProtKBH4SPE3SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4SPE3 
PFAMH4SPE3 
ProdomH4SPE3 
UniProtKBE9YAT9SubName: Full=Tetratricopeptide {ECO:0000313|EMBL:EGB68432.1};
InterProE9YAT9 
PFAME9YAT9 
ProdomE9YAT9 
UniProtKBB3BL84SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB3BL84 
PFAMB3BL84 
ProdomB3BL84 
UniProtKBB3XES5SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB3XES5 
PFAMB3XES5 
ProdomB3XES5 
UniProtKBI2I936SubName: Full=Outer membrane protein PgaA;
InterProI2I936 
PFAMI2I936 
ProdomI2I936 
UniProtKBI1ZTA2SubName: Full=Outer membrane protein PgaA;
InterProI1ZTA2 
PFAMI1ZTA2 
ProdomI1ZTA2 
UniProtKBB6I9A3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76613.1};
InterProB6I9A3 
PFAMB6I9A3 
ProdomB6I9A3 
UniProtKBI2SNT1SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EIH22452.1};
InterProI2SNT1 
PFAMI2SNT1 
ProdomI2SNT1 
UniProtKBB2N4H0SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB2N4H0 
PFAMB2N4H0 
ProdomB2N4H0 
UniProtKBB1X9E3SubName: Full=Putative outer membrane poly-beta-1,6-N-acetyl-D-glucosamine (PGA) translocation/docking protein;
InterProB1X9E3 
PFAMB1X9E3 
ProdomB1X9E3 
UniProtKBH5H583SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein;
InterProH5H583 
PFAMH5H583 
ProdomH5H583 
UniProtKBF8XJ71SubName: Full=Biofilm PGA synthesis protein PgaA {ECO:0000313|EMBL:EGU95233.1};
InterProF8XJ71 
PFAMF8XJ71 
ProdomF8XJ71 
UniProtKBF9R3S1SubName: Full=Outer membrane protein PgaA;
InterProF9R3S1 
PFAMF9R3S1 
ProdomF9R3S1 
UniProtKBF1YBW1SubName: Full=Biofilm PGA outer membrane secretin PgaA;
InterProF1YBW1 
PFAMF1YBW1 
ProdomF1YBW1 
UniProtKBH4NKU4SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4NKU4 
PFAMH4NKU4 
ProdomH4NKU4 
UniProtKBH4N4C7SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4N4C7 
PFAMH4N4C7 
ProdomH4N4C7 
UniProtKBH4RCU0SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4RCU0 
PFAMH4RCU0 
ProdomH4RCU0 
UniProtKBH4LQK4SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4LQK4 
PFAMH4LQK4 
ProdomH4LQK4 
UniProtKBF1XM95SubName: Full=Biofilm PGA outer membrane secretin PgaA;
InterProF1XM95 
PFAMF1XM95 
ProdomF1XM95 
UniProtKBH5GPS5SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH5GPS5 
PFAMH5GPS5 
ProdomH5GPS5 
UniProtKBH4UGT0SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:EHV62258.1};
InterProH4UGT0 
PFAMH4UGT0 
ProdomH4UGT0 
UniProtKBC3TEU2SubName: Full=Outer membrane protein PgaA {ECO:0000313|EMBL:CDP71994.1};SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:AIZ86551.1};SubName: Full=Putative outer mem
InterProC3TEU2 
PFAMC3TEU2 
ProdomC3TEU2 
UniProtKBI2R4U5SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein;
InterProI2R4U5 
PFAMI2R4U5 
ProdomI2R4U5 
UniProtKBA0A027YR19SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:EZD89115.1};
InterProA0A027YR19 
PFAMA0A027YR19 
ProdomA0A027YR19 
UniProtKBD8AQF1SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EFK14618.1};
InterProD8AQF1 
PFAMD8AQF1 
ProdomD8AQF1 
UniProtKBA0A070SM60SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:KDX18861.1};
InterProA0A070SM60 
PFAMA0A070SM60 
ProdomA0A070SM60 
UniProtKBA0A0F6C220SubName: Full=Outer membrane protein PgaA {ECO:0000313|EMBL:AFJ28276.1};
InterProA0A0F6C220 
PFAMA0A0F6C220 
ProdomA0A0F6C220 
UniProtKBE8I6E5SubName: Full=Outer membrane protein PgaA;
InterProE8I6E5 
PFAME8I6E5 
ProdomE8I6E5 
UniProtKBE9X5B8SubName: Full=Tetratricopeptide;
InterProE9X5B8 
PFAME9X5B8 
ProdomE9X5B8 
UniProtKBH1F5P2SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein;
InterProH1F5P2 
PFAMH1F5P2 
ProdomH1F5P2 
UniProtKBH4RTH3SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4RTH3 
PFAMH4RTH3 
ProdomH4RTH3 
UniProtKBH5HMQ1SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein;
InterProH5HMQ1 
PFAMH5HMQ1 
ProdomH5HMQ1 
UniProtKBB2P0Z4SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB2P0Z4 
PFAMB2P0Z4 
ProdomB2P0Z4 
UniProtKBB3WNK9SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB3WNK9 
PFAMB3WNK9 
ProdomB3WNK9 
UniProtKBC6UPP8SubName: Full=Putative outer membrane poly-beta-1,6-N-acetyl-D-glucosamine (PGA) translocation;
InterProC6UPP8 
PFAMC6UPP8 
ProdomC6UPP8 
UniProtKBC4ZRW8SubName: Full=Predicted outer membrane protein;
InterProC4ZRW8 
PFAMC4ZRW8 
ProdomC4ZRW8 
UniProtKBH5QSJ3SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH5QSJ3 
PFAMH5QSJ3 
ProdomH5QSJ3 
UniProtKBA0A069YYL2SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:KDU50073.1};
InterProA0A069YYL2 
PFAMA0A069YYL2 
ProdomA0A069YYL2 
UniProtKBH5PI54SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH5PI54 
PFAMH5PI54 
ProdomH5PI54 
UniProtKBA0A070DBY7SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:KDV38608.1};
InterProA0A070DBY7 
PFAMA0A070DBY7 
ProdomA0A070DBY7 
UniProtKBF4NDI5SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EGJ05485.1};
InterProF4NDI5 
PFAMF4NDI5 
ProdomF4NDI5 
UniProtKBB3BW70SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB3BW70 
PFAMB3BW70 
ProdomB3BW70 
UniProtKBI2Y1A7SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA;
InterProI2Y1A7 
PFAMI2Y1A7 
ProdomI2Y1A7 
UniProtKBA0A070FQI7SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:KDV64764.1};
InterProA0A070FQI7 
PFAMA0A070FQI7 
ProdomA0A070FQI7 
UniProtKBE8HSD0SubName: Full=Outer membrane protein PgaA;
InterProE8HSD0 
PFAME8HSD0 
ProdomE8HSD0 
UniProtKBG2F7K7SubName: Full=Outer membrane protein PgaA;
InterProG2F7K7 
PFAMG2F7K7 
ProdomG2F7K7 
UniProtKBE1HQD8SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EFK89875.1};
InterProE1HQD8 
PFAME1HQD8 
ProdomE1HQD8 
UniProtKBH9UQT5SubName: Full=Biofilm PGA synthesis protein pgaA {ECO:0000313|EMBL:AFG39878.1};
InterProH9UQT5 
PFAMH9UQT5 
ProdomH9UQT5 
UniProtKBI2U854SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA;
InterProI2U854 
PFAMI2U854 
ProdomI2U854 
UniProtKBG1ZXL5SubName: Full=Biofilm PGA synthesis protein pgaA;
InterProG1ZXL5 
PFAMG1ZXL5 
ProdomG1ZXL5 
UniProtKBH4PGU6SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4PGU6 
PFAMH4PGU6 
ProdomH4PGU6 
UniProtKBH4PXZ3SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH4PXZ3 
PFAMH4PXZ3 
ProdomH4PXZ3 
UniProtKBH5G9V6SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH5G9V6 
PFAMH5G9V6 
ProdomH5G9V6 
UniProtKBB1IV74SubName: Full=Tetratricopeptide TPR_2 repeat protein;Flags: Precursor;
InterProB1IV74 
PFAMB1IV74 
ProdomB1IV74 
UniProtKBH5I151SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein;
InterProH5I151 
PFAMH5I151 
ProdomH5I151 
UniProtKBH5IGY8SubName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:EHX34194.1};
InterProH5IGY8 
PFAMH5IGY8 
ProdomH5IGY8 
UniProtKBB3A4C7SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB3A4C7 
PFAMB3A4C7 
ProdomB3A4C7 
UniProtKBH5QBY6SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin;
InterProH5QBY6 
PFAMH5QBY6 
ProdomH5QBY6 
UniProtKBB5YU68SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB5YU68 
PFAMB5YU68 
ProdomB5YU68 
UniProtKBE1I0Y6SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EFK74010.1};
InterProE1I0Y6 
PFAME1I0Y6 
ProdomE1I0Y6 
UniProtKBE9W5M0SubName: Full=Tetratricopeptide;
InterProE9W5M0 
PFAME9W5M0 
ProdomE9W5M0 
UniProtKBE9TEE1SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EGB88368.1};
InterProE9TEE1 
PFAME9TEE1 
ProdomE9TEE1 
UniProtKBC6EHI3SubName: Full=Biofilm PGA synthesis protein PgaA {ECO:0000313|EMBL:ACT29592.1};
InterProC6EHI3 
PFAMC6EHI3 
ProdomC6EHI3 
UniProtKBI2ZX76SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA;
InterProI2ZX76 
PFAMI2ZX76 
ProdomI2ZX76 
UniProtKBD3QPZ7SubName: Full=Biofilm PGA synthesis protein pgaA {ECO:0000313|EMBL:ADD55856.1};
InterProD3QPZ7 
PFAMD3QPZ7 
ProdomD3QPZ7 
UniProtKBD8ETF7SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:EFK49050.1};
InterProD8ETF7 
PFAMD8ETF7 
ProdomD8ETF7 
UniProtKBA0A073GBG9SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:KEJ50603.1};
InterProA0A073GBG9 
PFAMA0A073GBG9 
ProdomA0A073GBG9 
UniProtKBA0A080G4J2SubName: Full=Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA {ECO:0000313|EMBL:KEN72561.1};
InterProA0A080G4J2 
PFAMA0A080G4J2 
ProdomA0A080G4J2 
UniProtKBA0A0F6F413SubName: Full=Biofilm PGA outer membrane secretin PgaA {ECO:0000313|EMBL:AJA25153.1};
InterProA0A0F6F413 
PFAMA0A0F6F413 
ProdomA0A0F6F413 
UniProtKBA0A0H3X3W6SubName: Full=Biofilm adhesin polysaccharide PGA export, predicted OM protein {ECO:0000313|EMBL:AKM34592.1};
InterProA0A0H3X3W6 
PFAMA0A0H3X3W6 
ProdomA0A0H3X3W6 
UniProtKBE8HDV2SubName: Full=Outer membrane protein PgaA;
InterProE8HDV2 
PFAME8HDV2 
ProdomE8HDV2 
UniProtKBB7A0G8SubName: Full=Biofilm PGA synthesis protein PgaA;
InterProB7A0G8 
PFAMB7A0G8 
ProdomB7A0G8