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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P71298.1
Original Database ID ref NP_414815.1
Organism Escherichia coli, Klebsiella oxytoca, etc.
Annotation intf_ecoli recname: full=putative
prophage cp4-6 integrase
Sequence Length 466

Dataset Information:

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Model Information

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Target Region205-433
Protein Length466
Template PDB Code4a8eA
Template Region12-270
Sequence Identity22%
E-Value0.091
GA3411
MPQS0.633416
z-DOPE0.09
TSVMod MethodMSALL
TSVMod RMSD4.664
TSVMod NO350.669
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4a8e
DBALI4a8eA 
JenaImageLibrary4a8e 
Target Sequence
UniProtKBQ2MCE1RecName: Full=Putative prophage CP4-6 integrase;
InterProQ2MCE1 
PFAMQ2MCE1 
ProdomQ2MCE1 
UniProtKBI0ZM25SubName: Full=Putative phage integrase;
InterProI0ZM25 
PFAMI0ZM25 
ProdomI0ZM25 
UniProtKBP71298RecName: Full=Putative prophage CP4-6 integrase;
InterProP71298 
PFAMP71298 
ProdomP71298 
UniProtKBE6NX70SubName: Full=CP4-6 prophage predicted phage integrase;
InterProE6NX70 
PFAME6NX70 
ProdomE6NX70 
UniProtKBB1XE23SubName: Full=CP4-6 prophage; predicted phage integrase;
InterProB1XE23 
PFAMB1XE23 
ProdomB1XE23 
UniProtKBA0A2I8WIM9SubName: Full=Preprotein translocase {ECO:0000313|EMBL:AUV94036.1}
InterProA0A2I8WIM9 
PFAMA0A2I8WIM9 
ProdomA0A2I8WIM9 
UniProtKBA0A4U3K2B6SubName: Full=DUF4102 domain-containing protein {ECO:0000313|EMBL:TGI61029.1}SubName: Full=Integrase family protein {ECO:0000313|EMBL:TXS99936.1}
InterProA0A4U3K2B6 
PFAMA0A4U3K2B6 
ProdomA0A4U3K2B6 
UniProtKBA0A5X2HKX9SubName: Full=DUF4102 domain-containing protein {ECO:0000313|EMBL:EBZ2758307.1}
InterProA0A5X2HKX9 
PFAMA0A5X2HKX9 
ProdomA0A5X2HKX9 
UniProtKBA0A6I5AJU1SubName: Full=Tyrosine-type recombinase/integrase {ECO:0000313|EMBL:MYL95195.1}
InterProA0A6I5AJU1 
PFAMA0A6I5AJU1 
ProdomA0A6I5AJU1 
UniProtKBA0A743PQN0SubName: Full=Integrase family protein {ECO:0000313|EMBL:HAF2153994.1}
InterProA0A743PQN0 
PFAMA0A743PQN0 
ProdomA0A743PQN0 
UniProtKBA0A7B5IB40SubName: Full=DUF4102 domain-containing protein {ECO:0000313|EMBL:HAJ6404739.1}
InterProA0A7B5IB40 
PFAMA0A7B5IB40 
ProdomA0A7B5IB40 
UniProtKBB1XE23SubName: Full=CP4-6 prophage; predicted phage integrase;
InterProB1XE23 
PFAMB1XE23 
ProdomB1XE23 
UniProtKBI0ZM25SubName: Full=Putative phage integrase;
InterProI0ZM25 
PFAMI0ZM25 
ProdomI0ZM25 
UniProtKBQ2MCE1Predicted phage integrase
InterProQ2MCE1 
PFAMQ2MCE1 
ProdomQ2MCE1 
UniProtKBA0A8F8DE30SubName: Full=Integrase family protein {ECO:0000313|EMBL:QXZ36121.1}
InterProA0A8F8DE30 
PFAMA0A8F8DE30 
ProdomA0A8F8DE30 
UniProtKBE6NX70SubName: Full=CP4-6 prophage; predicted phage integrase;
InterProE6NX70 
PFAME6NX70 
ProdomE6NX70 
UniProtKBQ2MCE1RecName: Full=Putative prophage CP4-6 integrase;
InterProQ2MCE1 
PFAMQ2MCE1 
ProdomQ2MCE1 
UniProtKBP71298.1INTF_ECOLI RecName: Full=Putative prophage CP4-6 integrase
InterProP71298.1 
PFAMP71298.1 
ProdomP71298.1 
UniProtKBP71298RecName: Full=Putative prophage CP4-6 integrase;
InterProP71298 
PFAMP71298 
ProdomP71298 
RefSeqYP_001729225.1 CP4-6 prophage; phage integrase [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_000935.1 predicted phage integrase [Escherichia coli str. K-12 substr. W3110]
RefSeqNP_414815.1 CP4-6 prophage; predicted phage integrase [Escherichia coli str. K-12 substr. MG1655]
GenPept315134967CP4-6 prophage; predicted phage integrase
GenPept549811827CP4-6 prophage; predicted phage integrase
GenPept2367104CP4-6 prophage; putative phage integrase
GenPept170079905 CP4-6 prophage; phage integrase [Escherichia coli str. K-12 substr. DH10B]
GenPept169887740CP4-6 prophage; predicted phage integrase
GenPept3024034INTF_ECOLI RecName: Full=Putative prophage CP4-6 integrase
GenPept1657482hypothetical protein
GenPept16128266 CP4-6 prophage; predicted phage integrase [Escherichia coli str. K-12 substr. MG1655]
GenPept817573642CP4-6 prophage, putative phage integrase
GenPept7466726A64754 probable integrase intF - Escherichia coli
GenPept817590205CP4-6 prophage, putative phage integrase
GenPept85674425predicted phage integrase
GenPept89107155 predicted phage integrase [Escherichia coli str. K-12 substr. W3110]
GenPept817581923CP4-6 prophage, putative phage integrase
GenPept731471704CP4-6 prophage; predicted phage integrase
GenPept730583975CP4-6 prophage; predicted phage integrase
GenPept687675501CP4-6 prophage; predicted phage integrase
GenPept687671215CP4-6 prophage; predicted phage integrase
GenPept682117868CP4-6 prophage; putative phage integrase
GenPept817586064CP4-6 prophage, putative phage integrase
GenPept817577784CP4-6 prophage, putative phage integrase
GenPept802133884CP4-6 prophage; predicted phage integrase
GenBankAAC73384.1 CP4-6 prophage; predicted phage integrase [Escherichia coli str. K-12 substr. MG1655]
GenBankAAB18010.1 hypothetical protein [Escherichia coli str. K-12 substr. MG1655]
GenBankACB01447.1 CP4-6 prophage; predicted phage integrase [Escherichia coli str. K-12 substr. DH10B]