University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P75680
Original Database ID UP P75680
Organism Enterobacter cloacae, Escherichia coli, etc.
Annotation cp4-6 prophage; partial transposase
of insertion element is911a
Sequence Length 141

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region25-56
Protein Length141
Template PDB Code3s4kA
Template Region30-66
Sequence Identity56%
E-Value0.8
GA3410.19
MPQS0.53675
z-DOPE1.11
TSVMod MethodMSALL
TSVMod RMSD7.219
TSVMod NO350.157
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3s4k
DBALI3s4kA 
JenaImageLibrary3s4k 
Target Sequence
UniProtKBQ9R2D6RecName: Full=Putative transposase InsO for insertion sequence element IS911A;
InterProQ9R2D6 
PFAMQ9R2D6 
ProdomQ9R2D6 
UniProtKBN1T5S4SubName: Full=HTH-like domain protein;
InterProN1T5S4 
PFAMN1T5S4 
ProdomN1T5S4 
UniProtKBM9KTR7SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:EMX90345.1};
InterProM9KTR7 
PFAMM9KTR7 
ProdomM9KTR7 
UniProtKBM9FLQ4SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:EMX23338.1};
InterProM9FLQ4 
PFAMM9FLQ4 
ProdomM9FLQ4 
UniProtKBM8V672SubName: Full=HTH-like domain protein;
InterProM8V672 
PFAMM8V672 
ProdomM8V672 
UniProtKBK0BGA9SubName: Full=Transposase protein;
InterProK0BGA9 
PFAMK0BGA9 
ProdomK0BGA9 
UniProtKBH5KNE0SubName: Full=Putative transposase;
InterProH5KNE0 
PFAMH5KNE0 
ProdomH5KNE0 
UniProtKBH5JDA5SubName: Full=Putative transposase insO for insertion sequence element IS911A;
InterProH5JDA5 
PFAMH5JDA5 
ProdomH5JDA5 
UniProtKBF9R6G0SubName: Full=Putative transposase;
InterProF9R6G0 
PFAMF9R6G0 
ProdomF9R6G0 
UniProtKBF9HUJ7SubName: Full=Uncharacterized protein;
InterProF9HUJ7 
PFAMF9HUJ7 
ProdomF9HUJ7 
UniProtKBF9CSQ8SubName: Full=Transposase of insertion element IS911A;
InterProF9CSQ8 
PFAMF9CSQ8 
ProdomF9CSQ8 
UniProtKBF8YPI7SubName: Full=Putative transposase of insertion element IS911A;
InterProF8YPI7 
PFAMF8YPI7 
ProdomF8YPI7 
UniProtKBF5MKD2SubName: Full=Putative transposase;
InterProF5MKD2 
PFAMF5MKD2 
ProdomF5MKD2 
UniProtKBC9QRD9SubName: Full=CP4-6 prophage partial transposase of insertion element IS911A;SubName: Full=IS911 orfA;
InterProC9QRD9 
PFAMC9QRD9 
ProdomC9QRD9 
UniProtKBB1XE00SubName: Full=CP4-6 prophage; partial transposase of insertion element IS911A;
InterProB1XE00 
PFAMB1XE00 
ProdomB1XE00 
UniProtKBN2IDH9SubName: Full=HTH-like domain protein;
InterProN2IDH9 
PFAMN2IDH9 
ProdomN2IDH9 
UniProtKBN2JLX4SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:ENA38435.1};
InterProN2JLX4 
PFAMN2JLX4 
ProdomN2JLX4 
UniProtKBN2KBI1SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:ENA43718.1};
InterProN2KBI1 
PFAMN2KBI1 
ProdomN2KBI1 
UniProtKBP75680RecName: Full=Putative transposase InsO for insertion sequence element IS911A;
InterProP75680 
PFAMP75680 
ProdomP75680 
UniProtKBN4P3D8SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:ENH04962.1};
InterProN4P3D8 
PFAMN4P3D8 
ProdomN4P3D8 
UniProtKBN4N3D1SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:ENG95403.1};
InterProN4N3D1 
PFAMN4N3D1 
ProdomN4N3D1 
UniProtKBN3NC36SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:END89713.1};
InterProN3NC36 
PFAMN3NC36 
ProdomN3NC36 
UniProtKBN3FBD0SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:ENC89845.1};
InterProN3FBD0 
PFAMN3FBD0 
ProdomN3FBD0 
UniProtKBN3F9W8SubName: Full=HTH-like domain protein;
InterProN3F9W8 
PFAMN3F9W8 
ProdomN3F9W8 
UniProtKBN3E2J9SubName: Full=HTH-like domain protein;
InterProN3E2J9 
PFAMN3E2J9 
ProdomN3E2J9 
UniProtKBN3DYJ8SubName: Full=HTH-like domain protein;
InterProN3DYJ8 
PFAMN3DYJ8 
ProdomN3DYJ8 
UniProtKBN3DAB0SubName: Full=HTH-like domain protein;
InterProN3DAB0 
PFAMN3DAB0 
ProdomN3DAB0 
UniProtKBN3CMY0SubName: Full=HTH-like domain protein;
InterProN3CMY0 
PFAMN3CMY0 
ProdomN3CMY0 
UniProtKBN3BEJ1SubName: Full=HTH-like domain protein;
InterProN3BEJ1 
PFAMN3BEJ1 
ProdomN3BEJ1 
UniProtKBN3AKI0SubName: Full=HTH-like domain protein;
InterProN3AKI0 
PFAMN3AKI0 
ProdomN3AKI0 
UniProtKBN2XWH4SubName: Full=HTH-like domain protein;
InterProN2XWH4 
PFAMN2XWH4 
ProdomN2XWH4 
UniProtKBN2WR92SubName: Full=HTH-like domain protein;
InterProN2WR92 
PFAMN2WR92 
ProdomN2WR92 
UniProtKBA0A0J0SN90SubName: Full=DNA-binding protein {ECO:0000313|EMBL:KLQ76312.1};
InterProA0A0J0SN90 
PFAMA0A0J0SN90 
ProdomA0A0J0SN90 
UniProtKBA0A0J0C0Z5SubName: Full=DNA-binding protein {ECO:0000313|EMBL:KLP38067.1};
InterProA0A0J0C0Z5 
PFAMA0A0J0C0Z5 
ProdomA0A0J0C0Z5 
UniProtKBA0A094WK77SubName: Full=DNA-binding protein {ECO:0000313|EMBL:AKO55790.1};SubName: Full=Fragment of transposase ORF B, IS911 {ECO:0000313|EMBL:CCQ32022.2};
InterProA0A094WK77 
PFAMA0A094WK77 
ProdomA0A094WK77 
UniProtKBA0A080E853SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:KEN35965.1};
InterProA0A080E853 
PFAMA0A080E853 
ProdomA0A080E853 
UniProtKBA0A068HNM5SubName: Full=DNA-binding protein {ECO:0000313|EMBL:AID93476.1};
InterProA0A068HNM5 
PFAMA0A068HNM5 
ProdomA0A068HNM5 
UniProtKBA0A080FNF4SubName: Full=HTH-like domain protein {ECO:0000313|EMBL:KEN66675.1};
InterProA0A080FNF4 
PFAMA0A080FNF4 
ProdomA0A080FNF4 
UniProtKBN3IRG1SubName: Full=HTH-like domain protein;
InterProN3IRG1 
PFAMN3IRG1 
ProdomN3IRG1 
UniProtKBF9HUJ7SubName: Full=Putative uncharacterized protein;
InterProF9HUJ7 
PFAMF9HUJ7 
ProdomF9HUJ7 
UniProtKBP75680CP4-6 prophage; partial transposase of insertion element IS911A
InterProP75680 
PFAMP75680 
ProdomP75680 
UniProtKBF9R6G0SubName: Full=Putative transposase;
InterProF9R6G0 
PFAMF9R6G0 
ProdomF9R6G0 
UniProtKBH5JDA5SubName: Full=Putative transposase insO for insertion sequence element IS911A;
InterProH5JDA5 
PFAMH5JDA5 
ProdomH5JDA5 
UniProtKBF5MKD2SubName: Full=Putative transposase;
InterProF5MKD2 
PFAMF5MKD2 
ProdomF5MKD2 
UniProtKBF9CSQ8SubName: Full=Transposase of insertion element IS911A;
InterProF9CSQ8 
PFAMF9CSQ8 
ProdomF9CSQ8 
UniProtKBC9QRD9SubName: Full=CP4-6 prophage; partial transposase of insertion element IS911A;SubName: Full=IS911 orfA;
InterProC9QRD9 
PFAMC9QRD9 
ProdomC9QRD9 
UniProtKBA0A1Z3MLW0SubName: Full=Transposase {ECO:0000313|EMBL:ASD48755.1}
InterProA0A1Z3MLW0 
PFAMA0A1Z3MLW0 
ProdomA0A1Z3MLW0 
UniProtKBA0A384H0C6SubName: Full=DNA-binding protein {ECO:0000313|EMBL:KTJ25181.1}
InterProA0A384H0C6 
PFAMA0A384H0C6 
ProdomA0A384H0C6 
UniProtKBA0A7U4H3L8SubName: Full=DNA-binding protein {ECO:0000313|EMBL:AID93476.1}
InterProA0A7U4H3L8 
PFAMA0A7U4H3L8 
ProdomA0A7U4H3L8 
UniProtKBA0A8B5FSG4SubName: Full=Transposase {ECO:0000313|EMBL:TFA45839.1}
InterProA0A8B5FSG4 
PFAMA0A8B5FSG4 
ProdomA0A8B5FSG4 
UniProtKBH5KNE0SubName: Full=Putative transposase;
InterProH5KNE0 
PFAMH5KNE0 
ProdomH5KNE0 
UniProtKBQ9R2D6Partial transposase of insertion element IS911A
InterProQ9R2D6 
PFAMQ9R2D6 
ProdomQ9R2D6 
UniProtKBF8YPI7SubName: Full=Putative transposase of insertion element IS911A;
InterProF8YPI7 
PFAMF8YPI7 
ProdomF8YPI7 
UniProtKBB1XE00SubName: Full=CP4-6 prophage; partial transposase of insertion element IS911A;
InterProB1XE00 
PFAMB1XE00 
ProdomB1XE00 
UniProtKBP75680RecName: Full=Putative transposase InsO for insertion sequence element IS911A;
InterProP75680 
PFAMP75680 
ProdomP75680 
UniProtKBP75680.1INSO1_ECOLI RecName: Full=Putative transposase insO for insertion sequence element IS911A
InterProP75680.1 
PFAMP75680.1 
ProdomP75680.1 
UniProtKBQ9R2D6RecName: Full=Putative transposase InsO for insertion sequence element IS911A;
InterProQ9R2D6 
PFAMQ9R2D6 
ProdomQ9R2D6 
RefSeqYP_001729202.1 CP4-6 prophage; partial transposase of insertion element IS911A [Escherichia coli str. K-12 substr. DH10B]
RefSeqAP_000910.1 partial transposase of insertion element IS911A [Escherichia coli str. K-12 substr. W3110]
GenPept85674401partial transposase of insertion element IS911A
GenPept899725662DNA-binding protein
GenPept407063394transposase protein
GenPept315134942CP4-6 prophage; partial transposase of insertion element IS911A
GenPept745374896fragment of transposase ORF B, IS911
GenPept260450547IS911 orfA
GenPept1786451CP4-6 prophage; partial transposase of insertion element IS911A
GenPept170079882 CP4-6 prophage; partial transposase of insertion element IS911A [Escherichia coli str. K-12 substr. DH10B]
GenPept808733672DNA-binding protein
GenPept899730022DNA-binding protein
GenPept169887717CP4-6 prophage; partial transposase of insertion element IS911A
GenPept16128242 (NC_000913) putative transposase [Escherichia coli K12]
GenPept687671188CP4-6 prophage; partial transposase of insertion element IS911A, interrupted by insertion of IS30 element
GenPept687675474CP4-6 prophage; partial transposase of insertion element IS911A, interrupted by insertion of IS30 element
GenPept732685783DNA-binding protein
GenPept816212370DNA-binding protein
GenPept81345776INSO1_ECOLI RecName: Full=Putative transposase insO for insertion sequence element IS911A
GenPept89107130 partial transposase of insertion element IS911A [Escherichia coli str. K-12 substr. W3110]
GenPept808729260DNA-binding protein
GenPept808720939DNA-binding protein
GenPept808716570DNA-binding protein
GenPept808712157DNA-binding protein
GenPept808707798DNA-binding protein
GenPept808703418DNA-binding protein
GenPept808699047DNA-binding protein
GenPept7466095A64751 hypothetical protein b0257 - Escherichia coli
GenPept899721308DNA-binding protein
GenPept660573625DNA-binding protein (plasmid)
GenBankACX40969.1 IS911 orfA [Escherichia coli DH1]
GenBankACB01424.1 CP4-6 prophage; partial transposase of insertion element IS911A [Escherichia coli str. K-12 substr. DH10B]