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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P75734.1
Original Database ID ref NP_415208.1
Organism Escherichia coli, Klebsiella oxytoca, etc.
Annotation ybfn_ecoli recname: full=uncharacterized
lipoprotein ybfn; flags: precursor
Sequence Length 108

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region9-81
Protein Length108
Template PDB Code2bbrA
Template Region112-188
Sequence Identity32%
E-Value0.14
GA3410.09
MPQS1.01603
z-DOPE-0.67
TSVMod MethodMSALL
TSVMod RMSD12.838
TSVMod NO350.1
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2bbrcrystal structure of mc159 reveals molecular mechanism of disc assembly and vflip inhibition
DBALI2bbrA 
JenaImageLibrary2bbr 
Target Sequence
UniProtKBH5DX51SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHW77258.1};
InterProH5DX51 
PFAMH5DX51 
ProdomH5DX51 
UniProtKBA0A071BRU1SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDY84468.1};
InterProA0A071BRU1 
PFAMA0A071BRU1 
ProdomA0A071BRU1 
UniProtKBA0A071C930SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDZ13709.1};
InterProA0A071C930 
PFAMA0A071C930 
ProdomA0A071C930 
UniProtKBA0A073GJR8SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEJ64909.1};
InterProA0A073GJR8 
PFAMA0A073GJR8 
ProdomA0A073GJR8 
UniProtKBA0A073GZ52SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEJ70419.1};
InterProA0A073GZ52 
PFAMA0A073GZ52 
ProdomA0A073GZ52 
UniProtKBA0A073T7V8SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEL21438.1};
InterProA0A073T7V8 
PFAMA0A073T7V8 
ProdomA0A073T7V8 
UniProtKBA0A073ULY1SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEL69188.1};
InterProA0A073ULY1 
PFAMA0A073ULY1 
ProdomA0A073ULY1 
UniProtKBA0A080G829SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEN73345.1};
InterProA0A080G829 
PFAMA0A080G829 
ProdomA0A080G829 
UniProtKBA0A080H0V0SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEN92051.1};
InterProA0A080H0V0 
PFAMA0A080H0V0 
ProdomA0A080H0V0 
UniProtKBA0A0A8U9H3SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:CEK03725.1};
InterProA0A0A8U9H3 
PFAMA0A0A8U9H3 
ProdomA0A0A8U9H3 
UniProtKBA0A0E1ZY91SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:EIL38222.1};
InterProA0A0E1ZY91 
PFAMA0A0E1ZY91 
ProdomA0A0E1ZY91 
UniProtKBA0A070SM78SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDX17904.1};
InterProA0A070SM78 
PFAMA0A070SM78 
ProdomA0A070SM78 
UniProtKBA0A070F836SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV61267.1};
InterProA0A070F836 
PFAMA0A070F836 
ProdomA0A070F836 
UniProtKBH4X2G3SubName: Full=Uncharacterized protein;
InterProH4X2G3 
PFAMH4X2G3 
ProdomH4X2G3 
UniProtKBB6HYP2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76268.1};
InterProB6HYP2 
PFAMB6HYP2 
ProdomB6HYP2 
UniProtKBC4ZWF8SubName: Full=Predicted lipoprotein;
InterProC4ZWF8 
PFAMC4ZWF8 
ProdomC4ZWF8 
UniProtKBH5FSD1SubName: Full=Uncharacterized protein;
InterProH5FSD1 
PFAMH5FSD1 
ProdomH5FSD1 
UniProtKBH5G8A4SubName: Full=Uncharacterized protein;
InterProH5G8A4 
PFAMH5G8A4 
ProdomH5G8A4 
UniProtKBC8UJY7SubName: Full=Predicted lipoprotein {ECO:0000313|EMBL:BAI34670.1};
InterProC8UJY7 
PFAMC8UJY7 
ProdomC8UJY7 
UniProtKBC9R0T6SubName: Full=Putative lipoprotein;Flags: Precursor;
InterProC9R0T6 
PFAMC9R0T6 
ProdomC9R0T6 
UniProtKBH5H3X2SubName: Full=Lipoprotein;
InterProH5H3X2 
PFAMH5H3X2 
ProdomH5H3X2 
UniProtKBD6HTP5SubName: Full=Lipoprotein ybfN {ECO:0000313|EMBL:EFE64727.2};
InterProD6HTP5 
PFAMD6HTP5 
ProdomD6HTP5 
UniProtKBD8A8A2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK20632.1};
InterProD8A8A2 
PFAMD8A8A2 
ProdomD8A8A2 
UniProtKBD8AUL0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK13169.1};
InterProD8AUL0 
PFAMD8AUL0 
ProdomD8AUL0 
UniProtKBE1HNA3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK90620.1};
InterProE1HNA3 
PFAME1HNA3 
ProdomE1HNA3 
UniProtKBE0J1S3SubName: Full=Predicted lipoprotein {ECO:0000313|EMBL:ADT74253.1};SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:AFH10388.1};
InterProE0J1S3 
PFAME0J1S3 
ProdomE0J1S3 
UniProtKBH4VTB6SubName: Full=Lipoprotein;
InterProH4VTB6 
PFAMH4VTB6 
ProdomH4VTB6 
UniProtKBH0QDM7SubName: Full=Predicted lipoprotein;
InterProH0QDM7 
PFAMH0QDM7 
ProdomH0QDM7 
UniProtKBG0FEF7SubName: Full=Uncharacterized lipoprotein ybfN {ECO:0000313|EMBL:AEJ55305.1};
InterProG0FEF7 
PFAMG0FEF7 
ProdomG0FEF7 
UniProtKBD8C3X3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFI86410.1};
InterProD8C3X3 
PFAMD8C3X3 
ProdomD8C3X3 
UniProtKBH5A9W1SubName: Full=Uncharacterized protein;
InterProH5A9W1 
PFAMH5A9W1 
ProdomH5A9W1 
UniProtKBH4Z9R0SubName: Full=Uncharacterized protein;
InterProH4Z9R0 
PFAMH4Z9R0 
ProdomH4Z9R0 
UniProtKBD8BAF4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ63910.1};
InterProD8BAF4 
PFAMD8BAF4 
ProdomD8BAF4 
UniProtKBB1X6L5SubName: Full=Predicted lipoprotein;
InterProB1X6L5 
PFAMB1X6L5 
ProdomB1X6L5 
UniProtKBH5CI61SubName: Full=Uncharacterized protein;
InterProH5CI61 
PFAMH5CI61 
ProdomH5CI61 
UniProtKBA0A023KGM0SubName: Full=Lipoprotein {ECO:0000313|EMBL:CEE07068.1};SubName: Full=Putative lipoprotein YbfN {ECO:0000313|EMBL:KGM68336.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AIX62429.1};
InterProA0A023KGM0 
PFAMA0A023KGM0 
ProdomA0A023KGM0 
UniProtKBH1BS97SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHP67626.1};
InterProH1BS97 
PFAMH1BS97 
ProdomH1BS97 
UniProtKBH4FLS2SubName: Full=Putative lipoprotein;
InterProH4FLS2 
PFAMH4FLS2 
ProdomH4FLS2 
UniProtKBG1Z126SubName: Full=Putative uncharacterized protein;
InterProG1Z126 
PFAMG1Z126 
ProdomG1Z126 
UniProtKBE7J3T2SubName: Full=Putative uncharacterized protein;
InterProE7J3T2 
PFAME7J3T2 
ProdomE7J3T2 
UniProtKBE8Y676SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:ADX51779.1};
InterProE8Y676 
PFAME8Y676 
ProdomE8Y676 
UniProtKBE7I1D9SubName: Full=Putative uncharacterized protein;
InterProE7I1D9 
PFAME7I1D9 
ProdomE7I1D9 
UniProtKBF4SKN8SubName: Full=YbfN {ECO:0000313|EMBL:EGI10195.1};
InterProF4SKN8 
PFAMF4SKN8 
ProdomF4SKN8 
UniProtKBE9YE70SubName: Full=GybfN {ECO:0000313|EMBL:EGB67277.1};
InterProE9YE70 
PFAME9YE70 
ProdomE9YE70 
UniProtKBF4VBA1SubName: Full=YbfN {ECO:0000313|EMBL:EGI47677.1};
InterProF4VBA1 
PFAMF4VBA1 
ProdomF4VBA1 
UniProtKBE9XBL2SubName: Full=YbfN protein;
InterProE9XBL2 
PFAME9XBL2 
ProdomE9XBL2 
UniProtKBE7HIZ7SubName: Full=Putative uncharacterized protein;
InterProE7HIZ7 
PFAME7HIZ7 
ProdomE7HIZ7 
UniProtKBG2B6I9SubName: Full=Putative uncharacterized protein;
InterProG2B6I9 
PFAMG2B6I9 
ProdomG2B6I9 
UniProtKBG1ZW37SubName: Full=Putative uncharacterized protein;
InterProG1ZW37 
PFAMG1ZW37 
ProdomG1ZW37 
UniProtKBA0A025GKK4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV63225.1};
InterProA0A025GKK4 
PFAMA0A025GKK4 
ProdomA0A025GKK4 
UniProtKBB3I443SubName: Full=Putative lipoprotein;
InterProB3I443 
PFAMB3I443 
ProdomB3I443 
UniProtKBA0A026H3X1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYY76464.1};
InterProA0A026H3X1 
PFAMA0A026H3X1 
ProdomA0A026H3X1 
UniProtKBD3GXD4SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:CBG33533.1};
InterProD3GXD4 
PFAMD3GXD4 
ProdomD3GXD4 
UniProtKBA0A069XG12SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDU28064.1};
InterProA0A069XG12 
PFAMA0A069XG12 
ProdomA0A069XG12 
UniProtKBA0A071D3H0SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDZ35612.1};
InterProA0A071D3H0 
PFAMA0A071D3H0 
ProdomA0A071D3H0 
UniProtKBA0A074I9J2SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEO03622.1};
InterProA0A074I9J2 
PFAMA0A074I9J2 
ProdomA0A074I9J2 
UniProtKBA0A0E2U1Y1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE21137.1};
InterProA0A0E2U1Y1 
PFAMA0A0E2U1Y1 
ProdomA0A0E2U1Y1 
UniProtKBE9WQC1SubName: Full=GybfN;
InterProE9WQC1 
PFAME9WQC1 
ProdomE9WQC1 
UniProtKBF9R4C1SubName: Full=Putative lipoprotein;
InterProF9R4C1 
PFAMF9R4C1 
ProdomF9R4C1 
UniProtKBG2F854SubName: Full=Putative lipoprotein;
InterProG2F854 
PFAMG2F854 
ProdomG2F854 
UniProtKBH4W797SubName: Full=Uncharacterized protein;
InterProH4W797 
PFAMH4W797 
ProdomH4W797 
UniProtKBH5C2R7SubName: Full=Uncharacterized protein;
InterProH5C2R7 
PFAMH5C2R7 
ProdomH5C2R7 
UniProtKBH5GND6SubName: Full=Uncharacterized protein;
InterProH5GND6 
PFAMH5GND6 
ProdomH5GND6 
UniProtKBH5EDL6SubName: Full=Uncharacterized protein;
InterProH5EDL6 
PFAMH5EDL6 
ProdomH5EDL6 
UniProtKBH5BM39SubName: Full=Uncharacterized protein;
InterProH5BM39 
PFAMH5BM39 
ProdomH5BM39 
UniProtKBA0A027TFQ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZD23917.1};
InterProA0A027TFQ2 
PFAMA0A027TFQ2 
ProdomA0A027TFQ2 
UniProtKBH5AQU5SubName: Full=Uncharacterized protein;
InterProH5AQU5 
PFAMH5AQU5 
ProdomH5AQU5 
UniProtKBA0A028BQU0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE25459.1};
InterProA0A028BQU0 
PFAMA0A028BQU0 
ProdomA0A028BQU0 
UniProtKBE7IMC7SubName: Full=Putative uncharacterized protein;
InterProE7IMC7 
PFAME7IMC7 
ProdomE7IMC7 
UniProtKBH4ZRG4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHW24439.1};
InterProH4ZRG4 
PFAMH4ZRG4 
ProdomH4ZRG4 
UniProtKBC8TKJ2SubName: Full=Predicted lipoprotein {ECO:0000313|EMBL:BAI24073.1};
InterProC8TKJ2 
PFAMC8TKJ2 
ProdomC8TKJ2 
UniProtKBA0A028DMA8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZE48694.1};
InterProA0A028DMA8 
PFAMA0A028DMA8 
ProdomA0A028DMA8 
UniProtKBA0A074I2J0SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEO01103.1};
InterProA0A074I2J0 
PFAMA0A074I2J0 
ProdomA0A074I2J0 
UniProtKBE9W7B3SubName: Full=GybfN;
InterProE9W7B3 
PFAME9W7B3 
ProdomE9W7B3 
UniProtKBG2CGV3SubName: Full=Putative uncharacterized protein;
InterProG2CGV3 
PFAMG2CGV3 
ProdomG2CGV3 
UniProtKBB3HJW3SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:AIF61490.1};
InterProB3HJW3 
PFAMB3HJW3 
ProdomB3HJW3 
UniProtKBB3WUM6SubName: Full=Putative lipoprotein;
InterProB3WUM6 
PFAMB3WUM6 
ProdomB3WUM6 
UniProtKBE9TNB0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGB85261.1};
InterProE9TNB0 
PFAME9TNB0 
ProdomE9TNB0 
UniProtKBF4U5H0SubName: Full=YbfN;
InterProF4U5H0 
PFAMF4U5H0 
ProdomF4U5H0 
UniProtKBF4UK56SubName: Full=YbfN;
InterProF4UK56 
PFAMF4UK56 
ProdomF4UK56 
UniProtKBG2ARA5SubName: Full=Putative uncharacterized protein;
InterProG2ARA5 
PFAMG2ARA5 
ProdomG2ARA5 
UniProtKBG2BKA9SubName: Full=Putative uncharacterized protein;
InterProG2BKA9 
PFAMG2BKA9 
ProdomG2BKA9 
UniProtKBH4UG02SubName: Full=Lipoprotein {ECO:0000313|EMBL:EHV62497.1};
InterProH4UG02 
PFAMH4UG02 
ProdomH4UG02 
UniProtKBH4UWU3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV64732.1};
InterProH4UWU3 
PFAMH4UWU3 
ProdomH4UWU3 
UniProtKBE1IR73SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFO58093.1};
InterProE1IR73 
PFAME1IR73 
ProdomE1IR73 
UniProtKBH5B686SubName: Full=Uncharacterized protein;
InterProH5B686 
PFAMH5B686 
ProdomH5B686 
UniProtKBH5CYQ1SubName: Full=Uncharacterized protein;
InterProH5CYQ1 
PFAMH5CYQ1 
ProdomH5CYQ1 
UniProtKBD8EDV8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK43704.1};
InterProD8EDV8 
PFAMD8EDV8 
ProdomD8EDV8 
UniProtKBA0A0E3MY65SubName: Full=Putative lipoprotein ChiQ {ECO:0000313|EMBL:AKA89627.1};
InterProA0A0E3MY65 
PFAMA0A0E3MY65 
ProdomA0A0E3MY65 
UniProtKBA0A080IH97SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEO28142.1};
InterProA0A080IH97 
PFAMA0A080IH97 
ProdomA0A080IH97 
UniProtKBH4YT42SubName: Full=Lipoprotein;
InterProH4YT42 
PFAMH4YT42 
ProdomH4YT42 
UniProtKBC8U333SubName: Full=Predicted lipoprotein {ECO:0000313|EMBL:BAI29541.1};
InterProC8U333 
PFAMC8U333 
ProdomC8U333 
UniProtKBH5IFS9SubName: Full=Lipoprotein {ECO:0000313|EMBL:EHX35579.1};
InterProH5IFS9 
PFAMH5IFS9 
ProdomH5IFS9 
UniProtKBH5EV50SubName: Full=Uncharacterized protein;
InterProH5EV50 
PFAMH5EV50 
ProdomH5EV50 
UniProtKBA0A069YXB5SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDU51773.1};
InterProA0A069YXB5 
PFAMA0A069YXB5 
ProdomA0A069YXB5 
UniProtKBA0A070XYM2SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDX83329.1};
InterProA0A070XYM2 
PFAMA0A070XYM2 
ProdomA0A070XYM2 
UniProtKBA0A073FZ78SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEJ51296.1};
InterProA0A073FZ78 
PFAMA0A073FZ78 
ProdomA0A073FZ78 
UniProtKBA0A073I1E6SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KEJ79432.1};
InterProA0A073I1E6 
PFAMA0A073I1E6 
ProdomA0A073I1E6 
UniProtKBA0A079GP13SubName: Full=YbfN-like lipofamily protein {ECO:0000313|EMBL:KDY91202.1};
InterProA0A079GP13 
PFAMA0A079GP13 
ProdomA0A079GP13 
UniProtKBH5DF41SubName: Full=Uncharacterized protein;
InterProH5DF41 
PFAMH5DF41 
ProdomH5DF41