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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link A0A017K543
Original Database ID ref NP_415479.1
Organism Escherichia coli, Klebsiella oxytoca, etc.
Annotation subname: full=protein sxy {eco:0000313|embl:eye06382.1};
Sequence Length 209

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region12-106
Protein Length209
Template PDB Code2od0A
Template Region9-103
Sequence Identity35%
E-Value1.2e-11
GA3411
MPQS0.990345
z-DOPE-0.94
TSVMod MethodMSALL
TSVMod RMSD2.318
TSVMod NO350.89
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2od0the crystal structure of gene product vp1028 from vibrio parahaemolyticus
DBALI2od0A 
CATH3.30.1460.30 Domain: 2od0A00 YgaC/TfoX-N like chaperone (92%)
JenaImageLibrary2od0 
Target Sequence
UniProtKBC5W323SubName: Full=Regulator of competence-specific genes {ECO:0000313|EMBL:ACT29657.1};
InterProC5W323 
PFAMC5W323 
ProdomC5W323 
UniProtKBA0A028E8E5SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EZE56198.1};
InterProA0A028E8E5 
PFAMA0A028E8E5 
ProdomA0A028E8E5 
UniProtKBA0A029I6Y3SubName: Full=Protein sxy {ECO:0000313|EMBL:EZJ44161.1};
InterProA0A029I6Y3 
PFAMA0A029I6Y3 
ProdomA0A029I6Y3 
UniProtKBA0A029LSD2SubName: Full=Protein sxy {ECO:0000313|EMBL:EZJ88259.1};
InterProA0A029LSD2 
PFAMA0A029LSD2 
ProdomA0A029LSD2 
UniProtKBA0A029MZ61SubName: Full=Protein sxy {ECO:0000313|EMBL:EZK02984.1};
InterProA0A029MZ61 
PFAMA0A029MZ61 
ProdomA0A029MZ61 
UniProtKBA0A064TU31SubName: Full=Protein sxy {ECO:0000313|EMBL:KDG97740.1};
InterProA0A064TU31 
PFAMA0A064TU31 
ProdomA0A064TU31 
UniProtKBA0A069X1J5SubName: Full=Protein sxy {ECO:0000313|EMBL:KDU23827.1};
InterProA0A069X1J5 
PFAMA0A069X1J5 
ProdomA0A069X1J5 
UniProtKBA0A070DE15SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KDV38675.1};
InterProA0A070DE15 
PFAMA0A070DE15 
ProdomA0A070DE15 
UniProtKBA0A070F2H7SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KDV59608.1};
InterProA0A070F2H7 
PFAMA0A070F2H7 
ProdomA0A070F2H7 
UniProtKBA0A070PXS7SubName: Full=Protein sxy {ECO:0000313|EMBL:KDW84930.1};
InterProA0A070PXS7 
PFAMA0A070PXS7 
ProdomA0A070PXS7 
UniProtKBA0A070SSK6SubName: Full=Protein sxy {ECO:0000313|EMBL:KDX20676.1};
InterProA0A070SSK6 
PFAMA0A070SSK6 
ProdomA0A070SSK6 
UniProtKBA0A027ZKH1SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EZD99233.1};
InterProA0A027ZKH1 
PFAMA0A027ZKH1 
ProdomA0A027ZKH1 
UniProtKBA0A026UI15SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EZA29318.1};
InterProA0A026UI15 
PFAMA0A026UI15 
ProdomA0A026UI15 
UniProtKBA7ZK63SubName: Full=TfoX family protein {ECO:0000313|EMBL:ABV20852.1};
InterProA7ZK63 
PFAMA7ZK63 
ProdomA7ZK63 
UniProtKBB7MS70SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR07184.1};
InterProB7MS70 
PFAMB7MS70 
ProdomB7MS70 
UniProtKBD3H0I2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBG33867.1};
InterProD3H0I2 
PFAMD3H0I2 
ProdomD3H0I2 
UniProtKBD3QPF5SubName: Full=Conserved protein {ECO:0000313|EMBL:ADD55793.1};
InterProD3QPF5 
PFAMD3QPF5 
ProdomD3QPF5 
UniProtKBD6HV10SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFE63497.2};
InterProD6HV10 
PFAMD6HV10 
ProdomD6HV10 
UniProtKBC8U5C3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI29852.1};
InterProC8U5C3 
PFAMC8U5C3 
ProdomC8U5C3 
UniProtKBD7YAI0SubName: Full=TfoX C-terminal domain protein {ECO:0000313|EMBL:EFJ95355.1};
InterProD7YAI0 
PFAMD7YAI0 
ProdomD7YAI0 
UniProtKBD7X249SubName: Full=TfoX C-terminal domain protein {ECO:0000313|EMBL:EFJ75621.1};
InterProD7X249 
PFAMD7X249 
ProdomD7X249 
UniProtKBD7YLI8SubName: Full=TfoX C-terminal domain protein {ECO:0000313|EMBL:EFK01836.1};
InterProD7YLI8 
PFAMD7YLI8 
ProdomD7YLI8 
UniProtKBD7JLW8SubName: Full=Sxy;
InterProD7JLW8 
PFAMD7JLW8 
ProdomD7JLW8 
UniProtKBB1LJ39SubName: Full=TfoX family protein {ECO:0000313|EMBL:ACB16386.1};
InterProB1LJ39 
PFAMB1LJ39 
ProdomB1LJ39 
UniProtKBA0A070YI62SubName: Full=Protein sxy {ECO:0000313|EMBL:KDX90114.1};
InterProA0A070YI62 
PFAMA0A070YI62 
ProdomA0A070YI62 
UniProtKBA0A071AL23SubName: Full=Protein sxy {ECO:0000313|EMBL:KDY62541.1};
InterProA0A071AL23 
PFAMA0A071AL23 
ProdomA0A071AL23 
UniProtKBA0A0E1LVN5SubName: Full=CRP-S-dependent promoter expression factor {ECO:0000313|EMBL:AJF55727.1};
InterProA0A0E1LVN5 
PFAMA0A0E1LVN5 
ProdomA0A0E1LVN5 
UniProtKBA0A0E2U0S7SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EZE18389.1};
InterProA0A0E2U0S7 
PFAMA0A0E2U0S7 
ProdomA0A0E2U0S7 
UniProtKBA0A0E3KM07SubName: Full=Protein Sxy {ECO:0000313|EMBL:AKA89940.1};
InterProA0A0E3KM07 
PFAMA0A0E3KM07 
ProdomA0A0E3KM07 
UniProtKBA0A0G3JGS1SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AKK38361.1};
InterProA0A0G3JGS1 
PFAMA0A0G3JGS1 
ProdomA0A0G3JGS1 
UniProtKBA0A0G3K7G8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKK47626.1};
InterProA0A0G3K7G8 
PFAMA0A0G3K7G8 
ProdomA0A0G3K7G8 
UniProtKBB3HC36SubName: Full=DNA transformation protein TfoX {ECO:0000313|EMBL:AIF59915.1};
InterProB3HC36 
PFAMB3HC36 
ProdomB3HC36 
UniProtKBB6I934SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76545.1};
InterProB6I934 
PFAMB6I934 
ProdomB6I934 
UniProtKBB3XKF0SubName: Full=TfoX family protein;
InterProB3XKF0 
PFAMB3XKF0 
ProdomB3XKF0 
UniProtKBB7M888SubName: Full=Uncharacterized protein;
InterProB7M888 
PFAMB7M888 
ProdomB7M888 
UniProtKBC3TFN7SubName: Full=CRP-S promoter co-activator {ECO:0000313|EMBL:KGM68957.1};SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AIX62817.1};SubName: Full=DNA transformation protein, T
InterProC3TFN7 
PFAMC3TFN7 
ProdomC3TFN7 
UniProtKBA0A0E0Y2Y0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS75182.1};
InterProA0A0E0Y2Y0 
PFAMA0A0E0Y2Y0 
ProdomA0A0E0Y2Y0 
UniProtKBA0A0A8U9M7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK04179.1};
InterProA0A0A8U9M7 
PFAMA0A0A8U9M7 
ProdomA0A0A8U9M7 
UniProtKBA0A0A0F8J2SubName: Full=CRP-S promoter co-activator {ECO:0000313|EMBL:KGM59461.1};
InterProA0A0A0F8J2 
PFAMA0A0A0F8J2 
ProdomA0A0A0F8J2 
UniProtKBA0A071DA70SubName: Full=Protein sxy {ECO:0000313|EMBL:KDZ37923.1};
InterProA0A071DA70 
PFAMA0A071DA70 
ProdomA0A071DA70 
UniProtKBA0A073G0K7SubName: Full=Protein sxy {ECO:0000313|EMBL:KEJ50566.1};
InterProA0A073G0K7 
PFAMA0A073G0K7 
ProdomA0A073G0K7 
UniProtKBA0A073UX43SubName: Full=Protein sxy {ECO:0000313|EMBL:KEL66534.1};
InterProA0A073UX43 
PFAMA0A073UX43 
ProdomA0A073UX43 
UniProtKBA0A073VTW6SubName: Full=Protein sxy {ECO:0000313|EMBL:KEL83541.1};
InterProA0A073VTW6 
PFAMA0A073VTW6 
ProdomA0A073VTW6 
UniProtKBA0A074IIU5SubName: Full=Protein sxy {ECO:0000313|EMBL:KEO13866.1};
InterProA0A074IIU5 
PFAMA0A074IIU5 
ProdomA0A074IIU5 
UniProtKBA0A074IRA0SubName: Full=Protein sxy {ECO:0000313|EMBL:KEO03130.1};
InterProA0A074IRA0 
PFAMA0A074IRA0 
ProdomA0A074IRA0 
UniProtKBA0A079FWH1SubName: Full=Protein sxy {ECO:0000313|EMBL:KDY66288.1};
InterProA0A079FWH1 
PFAMA0A079FWH1 
ProdomA0A079FWH1 
UniProtKBA0A079H5Z7SubName: Full=Protein sxy {ECO:0000313|EMBL:KDY96475.1};
InterProA0A079H5Z7 
PFAMA0A079H5Z7 
ProdomA0A079H5Z7 
UniProtKBA0A080FIN5SubName: Full=Protein sxy {ECO:0000313|EMBL:KEN58652.1};
InterProA0A080FIN5 
PFAMA0A080FIN5 
ProdomA0A080FIN5 
UniProtKBA0A080G136SubName: Full=Protein sxy {ECO:0000313|EMBL:KEN72603.1};
InterProA0A080G136 
PFAMA0A080G136 
ProdomA0A080G136 
UniProtKBC4ZQ85SubName: Full=Conserved protein;
InterProC4ZQ85 
PFAMC4ZQ85 
ProdomC4ZQ85 
UniProtKBB7N3C2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR12358.1};
InterProB7N3C2 
PFAMB7N3C2 
ProdomB7N3C2 
UniProtKBA0A017K543SubName: Full=Protein sxy {ECO:0000313|EMBL:EYE06382.1};
InterProA0A017K543 
PFAMA0A017K543 
ProdomA0A017K543 
UniProtKBD7ZG36SubName: Full=TfoX C-terminal domain protein {ECO:0000313|EMBL:EFJ80747.1};
InterProD7ZG36 
PFAMD7ZG36 
ProdomD7ZG36 
UniProtKBA0A026GXK1SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EYY75231.1};
InterProA0A026GXK1 
PFAMA0A026GXK1 
ProdomA0A026GXK1 
UniProtKBA0A029IY53SubName: Full=Protein sxy {ECO:0000313|EMBL:EZJ53401.1};
InterProA0A029IY53 
PFAMA0A029IY53 
ProdomA0A029IY53 
UniProtKBA0A069ZDK4SubName: Full=Protein sxy {ECO:0000313|EMBL:KDU55416.1};
InterProA0A069ZDK4 
PFAMA0A069ZDK4 
ProdomA0A069ZDK4 
UniProtKBA0A070U4I9SubName: Full=Protein sxy {ECO:0000313|EMBL:KDX36354.1};
InterProA0A070U4I9 
PFAMA0A070U4I9 
ProdomA0A070U4I9 
UniProtKBA0A073HP21SubName: Full=Protein sxy {ECO:0000313|EMBL:KEJ78961.1};
InterProA0A073HP21 
PFAMA0A073HP21 
ProdomA0A073HP21 
UniProtKBA0A079DMW2SubName: Full=Protein sxy {ECO:0000313|EMBL:KDY23438.1};
InterProA0A079DMW2 
PFAMA0A079DMW2 
ProdomA0A079DMW2 
UniProtKBA0A080IGZ8SubName: Full=Protein sxy {ECO:0000313|EMBL:KEO26925.1};
InterProA0A080IGZ8 
PFAMA0A080IGZ8 
ProdomA0A080IGZ8 
UniProtKBA0A0E1TB75SubName: Full=TfoX family protein {ECO:0000313|EMBL:EDU66662.1};
InterProA0A0E1TB75 
PFAMA0A0E1TB75 
ProdomA0A0E1TB75 
UniProtKBB3IN26SubName: Full=TfoX family protein;
InterProB3IN26 
PFAMB3IN26 
ProdomB3IN26 
UniProtKBD6I8M8SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFF07270.2};
InterProD6I8M8 
PFAMD6I8M8 
ProdomD6I8M8 
UniProtKBC6EI22SubName: Full=Regulator of competence-specific genes {ECO:0000313|EMBL:ACT29657.1};
InterProC6EI22 
PFAMC6EI22 
ProdomC6EI22 
UniProtKBB3IDM3SubName: Full=TfoX family protein;
InterProB3IDM3 
PFAMB3IDM3 
ProdomB3IDM3 
UniProtKBA0A023YUL4SubName: Full=DNA transformation protein TfoX {ECO:0000313|EMBL:AHY69578.1};
InterProA0A023YUL4 
PFAMA0A023YUL4 
ProdomA0A023YUL4 
UniProtKBA0A0I2BEI6SubName: Full=TfoX family protein {ECO:0000313|EMBL:CSS85524.1};
InterProA0A0I2BEI6 
PFAMA0A0I2BEI6 
ProdomA0A0I2BEI6 
UniProtKBA0A025CIF0SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EYV15168.1};
InterProA0A025CIF0 
PFAMA0A025CIF0 
ProdomA0A025CIF0 
UniProtKBA0A073GG42SubName: Full=Protein sxy {ECO:0000313|EMBL:KEJ64452.1};
InterProA0A073GG42 
PFAMA0A073GG42 
ProdomA0A073GG42 
UniProtKBA0A0J3W2D5SubName: Full=Protein Sxy {ECO:0000313|EMBL:KME71843.1};
InterProA0A0J3W2D5 
PFAMA0A0J3W2D5 
ProdomA0A0J3W2D5 
UniProtKBC9QZB7SubName: Full=Regulator of competence-specific genes;SubName: Full=Uncharacterized protein;
InterProC9QZB7 
PFAMC9QZB7 
ProdomC9QZB7 
UniProtKBA0A025FK10SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EYV52799.1};
InterProA0A025FK10 
PFAMA0A025FK10 
ProdomA0A025FK10 
UniProtKBA0A069XQ31SubName: Full=Protein sxy {ECO:0000313|EMBL:KDU32288.1};
InterProA0A069XQ31 
PFAMA0A069XQ31 
ProdomA0A069XQ31 
UniProtKBA0A073GXK1SubName: Full=Protein sxy {ECO:0000313|EMBL:KEJ69909.1};
InterProA0A073GXK1 
PFAMA0A073GXK1 
ProdomA0A073GXK1 
UniProtKBA0A080GUT7SubName: Full=Protein sxy {ECO:0000313|EMBL:KEN91724.1};
InterProA0A080GUT7 
PFAMA0A080GUT7 
ProdomA0A080GUT7 
UniProtKBB3WTI4SubName: Full=TfoX family protein;
InterProB3WTI4 
PFAMB3WTI4 
ProdomB3WTI4 
UniProtKBC6UEU4SubName: Full=Putative uncharacterized protein yccR;
InterProC6UEU4 
PFAMC6UEU4 
ProdomC6UEU4 
UniProtKBA0A073TYQ2SubName: Full=Protein sxy {ECO:0000313|EMBL:KEL27596.1};
InterProA0A073TYQ2 
PFAMA0A073TYQ2 
ProdomA0A073TYQ2 
UniProtKBA0A074HX18SubName: Full=Protein sxy {ECO:0000313|EMBL:KEO00584.1};
InterProA0A074HX18 
PFAMA0A074HX18 
ProdomA0A074HX18 
UniProtKBA0A079F7D2SubName: Full=Protein sxy {ECO:0000313|EMBL:KDY53786.1};
InterProA0A079F7D2 
PFAMA0A079F7D2 
ProdomA0A079F7D2 
UniProtKBA0A080ENI9SubName: Full=Protein sxy {ECO:0000313|EMBL:KEN50782.1};
InterProA0A080ENI9 
PFAMA0A080ENI9 
ProdomA0A080ENI9 
UniProtKBA0A080J8S1SubName: Full=Protein sxy {ECO:0000313|EMBL:KEO36255.1};
InterProA0A080J8S1 
PFAMA0A080J8S1 
ProdomA0A080J8S1 
UniProtKBA0A0E0TW39SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE55736.1};
InterProA0A0E0TW39 
PFAMA0A0E0TW39 
ProdomA0A0E0TW39 
UniProtKBA0A0E1ZWB5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL37456.1};
InterProA0A0E1ZWB5 
PFAMA0A0E1ZWB5 
ProdomA0A0E1ZWB5 
UniProtKBA0A0G3HV69SubName: Full=Required for expression of CRP-S-dependent promoters protein {ECO:0000313|EMBL:AKK17196.1};
InterProA0A0G3HV69 
PFAMA0A0G3HV69 
ProdomA0A0G3HV69 
UniProtKBB3HZ74SubName: Full=TfoX family protein;
InterProB3HZ74 
PFAMB3HZ74 
ProdomB3HZ74 
UniProtKBB7LE59SubName: Full=YccR protein {ECO:0000313|EMBL:CAU96870.1};
InterProB7LE59 
PFAMB7LE59 
ProdomB7LE59 
UniProtKBA0A071CD73SubName: Full=Protein sxy {ECO:0000313|EMBL:KDZ16752.1};
InterProA0A071CD73 
PFAMA0A071CD73 
ProdomA0A071CD73 
UniProtKBA0A070V0I1SubName: Full=Protein sxy {ECO:0000313|EMBL:KDX48087.1};
InterProA0A070V0I1 
PFAMA0A070V0I1 
ProdomA0A070V0I1 
UniProtKBA0A070P899SubName: Full=Protein sxy {ECO:0000313|EMBL:KDW77067.1};
InterProA0A070P899 
PFAMA0A070P899 
ProdomA0A070P899 
UniProtKBB1X8R3SubName: Full=CRP-S promoter co-activator;
InterProB1X8R3 
PFAMB1X8R3 
ProdomB1X8R3 
UniProtKBD6IM31SubName: Full=Putative uncharacterized protein;
InterProD6IM31 
PFAMD6IM31 
ProdomD6IM31 
UniProtKBD7XJ39SubName: Full=TfoX C-terminal domain protein {ECO:0000313|EMBL:EFJ88627.1};
InterProD7XJ39 
PFAMD7XJ39 
ProdomD7XJ39 
UniProtKBC8TM75SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI24402.1};
InterProC8TM75 
PFAMC8TM75 
ProdomC8TM75 
UniProtKBA0A026RS19SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EYZ95840.1};
InterProA0A026RS19 
PFAMA0A026RS19 
ProdomA0A026RS19 
UniProtKBA0A028BRW0SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EZE26122.1};
InterProA0A028BRW0 
PFAMA0A028BRW0 
ProdomA0A028BRW0 
UniProtKBA0A029KYY4SubName: Full=Protein sxy {ECO:0000313|EMBL:EZJ78339.1};
InterProA0A029KYY4 
PFAMA0A029KYY4 
ProdomA0A029KYY4 
UniProtKBA0A062Y7N8SubName: Full=Protein sxy {ECO:0000313|EMBL:KDA59088.1};
InterProA0A062Y7N8 
PFAMA0A062Y7N8 
ProdomA0A062Y7N8 
UniProtKBA0A070D2W0SubName: Full=Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KDV35488.1};
InterProA0A070D2W0 
PFAMA0A070D2W0 
ProdomA0A070D2W0 
UniProtKBB2N582SubName: Full=TfoX family protein;
InterProB2N582 
PFAMB2N582 
ProdomB2N582