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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P75882.1
Original Database ID ref NP_415504.1
Organism Escherichia coli, Shigella sonnei, etc.
Annotation gfcd_ecoli recname: full=uncharacterized
lipoprotein gfcd; altname: full=group
4 capsule protein d homolog;
flags: precursor
Sequence Length 698

Dataset Information:

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Model Information

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Target Region464-573
Protein Length698
Template PDB Code3n12A
Template Region144-253
Sequence Identity28%
E-Value0.25
GA3410.09
MPQS0.288693
z-DOPE1.02
TSVMod MethodMSALL
TSVMod RMSD15.497
TSVMod NO350.05
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3n12crystal stricture of chitinase in complex with zinc atoms from bacillus cereus nctu2
DBALI3n12A 
JenaImageLibrary3n12 
Target Sequence
UniProtKBS1LP06SubName: Full=Porin;
InterProS1LP06 
PFAMS1LP06 
ProdomS1LP06 
UniProtKBA0A071AL04SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY62516.1};
InterProA0A071AL04 
PFAMA0A071AL04 
ProdomA0A071AL04 
UniProtKBA0A071BVG0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY87132.1};
InterProA0A071BVG0 
PFAMA0A071BVG0 
ProdomA0A071BVG0 
UniProtKBA0A071CDA2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ16777.1};
InterProA0A071CDA2 
PFAMA0A071CDA2 
ProdomA0A071CDA2 
UniProtKBA0A073T713SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL20902.1};
InterProA0A073T713 
PFAMA0A073T713 
ProdomA0A073T713 
UniProtKBA0A074IIW9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO13891.1};
InterProA0A074IIW9 
PFAMA0A074IIW9 
ProdomA0A074IIW9 
UniProtKBA0A074IJ15SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO00610.1};
InterProA0A074IJ15 
PFAMA0A074IJ15 
ProdomA0A074IJ15 
UniProtKBA0A079DMX8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY23463.1};
InterProA0A079DMX8 
PFAMA0A079DMX8 
ProdomA0A079DMX8 
UniProtKBA0A079F9Q6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY53760.1};
InterProA0A079F9Q6 
PFAMA0A079F9Q6 
ProdomA0A079F9Q6 
UniProtKBA0A079G0Z8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY66262.1};
InterProA0A079G0Z8 
PFAMA0A079G0Z8 
ProdomA0A079G0Z8 
UniProtKBA0A079H1V0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY96499.1};
InterProA0A079H1V0 
PFAMA0A079H1V0 
ProdomA0A079H1V0 
UniProtKBA0A070YI86SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX90139.1};
InterProA0A070YI86 
PFAMA0A070YI86 
ProdomA0A070YI86 
UniProtKBA0A070V0N2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX48112.1};
InterProA0A070V0N2 
PFAMA0A070V0N2 
ProdomA0A070V0N2 
UniProtKBA0A070STE1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX20650.1};
InterProA0A070STE1 
PFAMA0A070STE1 
ProdomA0A070STE1 
UniProtKBI2PQ04SubName: Full=Uncharacterized protein;
InterProI2PQ04 
PFAMI2PQ04 
ProdomI2PQ04 
UniProtKBI2R4Q7SubName: Full=Uncharacterized protein;
InterProI2R4Q7 
PFAMI2R4Q7 
ProdomI2R4Q7 
UniProtKBT2N591SubName: Full=Uncharacterized protein;
InterProT2N591 
PFAMT2N591 
ProdomT2N591 
UniProtKBT7JE87SubName: Full=Porin;
InterProT7JE87 
PFAMT7JE87 
ProdomT7JE87 
UniProtKBI2ZXI6SubName: Full=Lipoprotein, PF06082 family;
InterProI2ZXI6 
PFAMI2ZXI6 
ProdomI2ZXI6 
UniProtKBI4J2R1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF83520.1};
InterProI4J2R1 
PFAMI4J2R1 
ProdomI4J2R1 
UniProtKBT8YKN3SubName: Full=Porin {ECO:0000313|EMBL:EQX56905.1};
InterProT8YKN3 
PFAMT8YKN3 
ProdomT8YKN3 
UniProtKBA0A024L3K5SubName: Full=Membrane protein {ECO:0000313|EMBL:AJB51131.1};SubName: Full=Porin {ECO:0000313|EMBL:KLX07285.1};SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:KGM78275.1};SubName: Full=Putative l
InterProA0A024L3K5 
PFAMA0A024L3K5 
ProdomA0A024L3K5 
UniProtKBA0A069XBI5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU27064.1};
InterProA0A069XBI5 
PFAMA0A069XBI5 
ProdomA0A069XBI5 
UniProtKBA0A069YPU0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU49257.1};
InterProA0A069YPU0 
PFAMA0A069YPU0 
ProdomA0A069YPU0 
UniProtKBA0A080GUX4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN91749.1};
InterProA0A080GUX4 
PFAMA0A080GUX4 
ProdomA0A080GUX4 
UniProtKBA0A080ICM5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO26951.1};
InterProA0A080ICM5 
PFAMA0A080ICM5 
ProdomA0A080ICM5 
UniProtKBN4DI39SubName: Full=Uncharacterized protein;
InterProN4DI39 
PFAMN4DI39 
ProdomN4DI39 
UniProtKBN4HCA4SubName: Full=Uncharacterized protein;
InterProN4HCA4 
PFAMN4HCA4 
ProdomN4HCA4 
UniProtKBN4HEL7SubName: Full=Uncharacterized protein;
InterProN4HEL7 
PFAMN4HEL7 
ProdomN4HEL7 
UniProtKBC4ZQB0SubName: Full=Conserved protein;
InterProC4ZQB0 
PFAMC4ZQB0 
ProdomC4ZQB0 
UniProtKBS1AXG1SubName: Full=Porin;
InterProS1AXG1 
PFAMS1AXG1 
ProdomS1AXG1 
UniProtKBC9QZ92SubName: Full=Uncharacterized protein;Flags: Precursor;
InterProC9QZ92 
PFAMC9QZ92 
ProdomC9QZ92 
UniProtKBD8AQJ5SubName: Full=DUF940 family {ECO:0000313|EMBL:EFK14590.1};
InterProD8AQJ5 
PFAMD8AQJ5 
ProdomD8AQJ5 
UniProtKBK5G430SubName: Full=Putative lipoprotein;
InterProK5G430 
PFAMK5G430 
ProdomK5G430 
UniProtKBS1EV27SubName: Full=Porin;
InterProS1EV27 
PFAMS1EV27 
ProdomS1EV27 
UniProtKBB1X8T7SubName: Full=Conserved protein;
InterProB1X8T7 
PFAMB1X8T7 
ProdomB1X8T7 
UniProtKBN3Q3L3SubName: Full=Uncharacterized protein;
InterProN3Q3L3 
PFAMN3Q3L3 
ProdomN3Q3L3 
UniProtKBN2L2I6SubName: Full=Uncharacterized protein;
InterProN2L2I6 
PFAMN2L2I6 
ProdomN2L2I6 
UniProtKBN2GXA3SubName: Full=Uncharacterized protein;
InterProN2GXA3 
PFAMN2GXA3 
ProdomN2GXA3 
UniProtKBA0A0E1LVQ9SubName: Full=Putative O-antigen capsule production periplasmic protein {ECO:0000313|EMBL:AJF55752.1};
InterProA0A0E1LVQ9 
PFAMA0A0E1LVQ9 
ProdomA0A0E1LVQ9 
UniProtKBA0A0E3KM15SubName: Full=Putative lipoprotein GfcD {ECO:0000313|EMBL:AKA89965.1};
InterProA0A0E3KM15 
PFAMA0A0E3KM15 
ProdomA0A0E3KM15 
UniProtKBL4WUA3SubName: Full=Porin;
InterProL4WUA3 
PFAML4WUA3 
ProdomL4WUA3 
UniProtKBL8C477SubName: Full=Putative outer membrane lipoprotein YmcA;
InterProL8C477 
PFAML8C477 
ProdomL8C477 
UniProtKBM2P0R4SubName: Full=Uncharacterized protein;
InterProM2P0R4 
PFAMM2P0R4 
ProdomM2P0R4 
UniProtKBM7VL12SubName: Full=Uncharacterized protein;
InterProM7VL12 
PFAMM7VL12 
ProdomM7VL12 
UniProtKBM7VQ69SubName: Full=Uncharacterized protein;
InterProM7VQ69 
PFAMM7VQ69 
ProdomM7VQ69 
UniProtKBM8ZCM8SubName: Full=Uncharacterized protein;
InterProM8ZCM8 
PFAMM8ZCM8 
ProdomM8ZCM8 
UniProtKBN2FFT1SubName: Full=Uncharacterized protein;
InterProN2FFT1 
PFAMN2FFT1 
ProdomN2FFT1 
UniProtKBN2G3S9SubName: Full=Uncharacterized protein;
InterProN2G3S9 
PFAMN2G3S9 
ProdomN2G3S9 
UniProtKBS1I050SubName: Full=Porin {ECO:0000313|EMBL:EOW16728.1};
InterProS1I050 
PFAMS1I050 
ProdomS1I050 
UniProtKBI0ZPX7SubName: Full=Uncharacterized protein;
InterProI0ZPX7 
PFAMI0ZPX7 
ProdomI0ZPX7 
UniProtKBL4A1Z0SubName: Full=Porin;
InterProL4A1Z0 
PFAML4A1Z0 
ProdomL4A1Z0 
UniProtKBI4TIY2SubName: Full=Uncharacterized protein;
InterProI4TIY2 
PFAMI4TIY2 
ProdomI4TIY2 
UniProtKBL3LKR3SubName: Full=Porin;
InterProL3LKR3 
PFAML3LKR3 
ProdomL3LKR3 
UniProtKBE1HGP2SubName: Full=DUF940 family {ECO:0000313|EMBL:EFK92922.1};
InterProE1HGP2 
PFAME1HGP2 
ProdomE1HGP2 
UniProtKBE6AZN4SubName: Full=Uncharacterized lipoprotein gfcD {ECO:0000313|EMBL:EFU99761.1};
InterProE6AZN4 
PFAME6AZN4 
ProdomE6AZN4 
UniProtKBE9WD41SubName: Full=YmcA protein;
InterProE9WD41 
PFAME9WD41 
ProdomE9WD41 
UniProtKBM9D918SubName: Full=Uncharacterized protein;
InterProM9D918 
PFAMM9D918 
ProdomM9D918 
UniProtKBG2ASI5SubName: Full=Putative uncharacterized protein;
InterProG2ASI5 
PFAMG2ASI5 
ProdomG2ASI5 
UniProtKBG2CHS7SubName: Full=Putative uncharacterized protein;
InterProG2CHS7 
PFAMG2CHS7 
ProdomG2CHS7 
UniProtKBS0ZCN7SubName: Full=Porin;
InterProS0ZCN7 
PFAMS0ZCN7 
ProdomS0ZCN7 
UniProtKBH4W8E4SubName: Full=Conserved, putative lipoprotein and/or outer membrane porin predicted porin;
InterProH4W8E4 
PFAMH4W8E4 
ProdomH4W8E4 
UniProtKBT7Z4V1SubName: Full=Porin;
InterProT7Z4V1 
PFAMT7Z4V1 
ProdomT7Z4V1 
UniProtKBS1PDV6SubName: Full=Porin;
InterProS1PDV6 
PFAMS1PDV6 
ProdomS1PDV6 
UniProtKBH4VU95SubName: Full=Uncharacterized protein;
InterProH4VU95 
PFAMH4VU95 
ProdomH4VU95 
UniProtKBN4FCL8SubName: Full=Uncharacterized protein;
InterProN4FCL8 
PFAMN4FCL8 
ProdomN4FCL8 
UniProtKBH4VDZ8SubName: Full=Uncharacterized protein;
InterProH4VDZ8 
PFAMH4VDZ8 
ProdomH4VDZ8 
UniProtKBL3KWU8SubName: Full=Porin {ECO:0000313|EMBL:ELE02872.1};
InterProL3KWU8 
PFAML3KWU8 
ProdomL3KWU8 
UniProtKBN4E4B9SubName: Full=Uncharacterized protein;
InterProN4E4B9 
PFAMN4E4B9 
ProdomN4E4B9 
UniProtKBS1CKM9SubName: Full=Porin;
InterProS1CKM9 
PFAMS1CKM9 
ProdomS1CKM9 
UniProtKBI2Y153SubName: Full=Lipoprotein, PF06082 family;
InterProI2Y153 
PFAMI2Y153 
ProdomI2Y153 
UniProtKBD8B6R5SubName: Full=DUF940 family {ECO:0000313|EMBL:EFJ65216.1};
InterProD8B6R5 
PFAMD8B6R5 
ProdomD8B6R5 
UniProtKBL3VL19SubName: Full=Porin;
InterProL3VL19 
PFAML3VL19 
ProdomL3VL19 
UniProtKBF4SMI1SubName: Full=Putative lipoprotein {ECO:0000313|EMBL:EGI10531.1};
InterProF4SMI1 
PFAMF4SMI1 
ProdomF4SMI1 
UniProtKBL3VXB4SubName: Full=Porin;
InterProL3VXB4 
PFAML3VXB4 
ProdomL3VXB4 
UniProtKBH9UQP8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFG39841.1};
InterProH9UQP8 
PFAMH9UQP8 
ProdomH9UQP8 
UniProtKBI2I975SubName: Full=Uncharacterized protein;
InterProI2I975 
PFAMI2I975 
ProdomI2I975 
UniProtKBF9QWF5SubName: Full=Putative uncharacterized protein;
InterProF9QWF5 
PFAMF9QWF5 
ProdomF9QWF5 
UniProtKBL3X356SubName: Full=Porin;
InterProL3X356 
PFAML3X356 
ProdomL3X356 
UniProtKBN3AQ29SubName: Full=Uncharacterized protein;
InterProN3AQ29 
PFAMN3AQ29 
ProdomN3AQ29 
UniProtKBG2B7L6SubName: Full=Putative uncharacterized protein;
InterProG2B7L6 
PFAMG2B7L6 
ProdomG2B7L6 
UniProtKBP75882RecName: Full=Uncharacterized lipoprotein GfcD;AltName: Full=Group 4 capsule protein D homolog;Flags: Precursor;
InterProP75882 
PFAMP75882 
ProdomP75882 
UniProtKBG2F9N0SubName: Full=Putative uncharacterized protein;
InterProG2F9N0 
PFAMG2F9N0 
ProdomG2F9N0 
UniProtKBH4UGN8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV62216.1};
InterProH4UGN8 
PFAMH4UGN8 
ProdomH4UGN8 
UniProtKBH4UXR0SubName: Full=Conserved, putative lipoprotein and/or outer membrane porin predicted porin {ECO:0000313|EMBL:EHV62886.1};
InterProH4UXR0 
PFAMH4UXR0 
ProdomH4UXR0 
UniProtKBS1KB50SubName: Full=Porin;
InterProS1KB50 
PFAMS1KB50 
ProdomS1KB50 
UniProtKBS0XRB8SubName: Full=Porin;
InterProS0XRB8 
PFAMS0XRB8 
ProdomS0XRB8 
UniProtKBE9WQJ4SubName: Full=YmcA protein;
InterProE9WQJ4 
PFAME9WQJ4 
ProdomE9WQJ4 
UniProtKBL4P7J3SubName: Full=Porin;
InterProL4P7J3 
PFAML4P7J3 
ProdomL4P7J3 
UniProtKBL3QXD7SubName: Full=Porin;
InterProL3QXD7 
PFAML3QXD7 
ProdomL3QXD7 
UniProtKBS0ULW5SubName: Full=Porin;
InterProS0ULW5 
PFAMS0ULW5 
ProdomS0ULW5 
UniProtKBI2YHE9SubName: Full=Lipoprotein, PF06082 family;
InterProI2YHE9 
PFAMI2YHE9 
ProdomI2YHE9 
UniProtKBK3I787SubName: Full=Putative lipoprotein;
InterProK3I787 
PFAMK3I787 
ProdomK3I787 
UniProtKBK3IWB7SubName: Full=Putative lipoprotein;
InterProK3IWB7 
PFAMK3IWB7 
ProdomK3IWB7 
UniProtKBD8BVB7SubName: Full=DUF940 family {ECO:0000313|EMBL:EFI89394.1};
InterProD8BVB7 
PFAMD8BVB7 
ProdomD8BVB7 
UniProtKBK5H9E4SubName: Full=Uncharacterized protein;
InterProK5H9E4 
PFAMK5H9E4 
ProdomK5H9E4 
UniProtKBL3RN34SubName: Full=Porin;
InterProL3RN34 
PFAML3RN34 
ProdomL3RN34 
UniProtKBE3PJ07SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBJ00562.1};
InterProE3PJ07 
PFAME3PJ07 
ProdomE3PJ07 
UniProtKBL3TUU4SubName: Full=Porin;
InterProL3TUU4 
PFAML3TUU4 
ProdomL3TUU4 
UniProtKBS1KYN0SubName: Full=Porin;
InterProS1KYN0 
PFAMS1KYN0 
ProdomS1KYN0