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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P75975.2
Original Database ID ref NP_415664.2
Organism Escherichia coli, Salmonella enterica, etc.
Annotation ymft_ecoli recname: full=uncharacterized
protein ymft
Sequence Length 66

Dataset Information:

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Model Information

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Target Region1-61
Protein Length66
Template PDB Code2kpjA
Template Region14-71
Sequence Identity28%
E-Value0.0056
GA3410.98
MPQS1.37474
z-DOPE-1.28
TSVMod MethodMSALL
TSVMod RMSD2.795
TSVMod NO350.862
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2kpjsolution structure of protein sos-response transcriptional repressor, lexa from eubacterium rectale. northeast structural genomics consortium target err9a
DBALI2kpjA 
JenaImageLibrary2kpj 
Target Sequence
UniProtKBC9QYG6SubName: Full=E14 prophage predicted DNA-binding transcriptional regulator;
InterProC9QYG6 
PFAMC9QYG6 
ProdomC9QYG6 
UniProtKBF4T726SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGI13103.1};
InterProF4T726 
PFAMF4T726 
ProdomF4T726 
UniProtKBG2F4F1SubName: Full=E14 prophage; predicted DNA-binding transcriptional regulator;
InterProG2F4F1 
PFAMG2F4F1 
ProdomG2F4F1 
UniProtKBI0ZQU8SubName: Full=Uncharacterized protein;
InterProI0ZQU8 
PFAMI0ZQU8 
ProdomI0ZQU8 
UniProtKBI2WY82SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EII35707.1};
InterProI2WY82 
PFAMI2WY82 
ProdomI2WY82 
UniProtKBM2PQR6SubName: Full=E14 prophage DNA-binding transcriptional regulator;
InterProM2PQR6 
PFAMM2PQR6 
ProdomM2PQR6 
UniProtKBA0A026RKN3SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYZ93610.1};
InterProA0A026RKN3 
PFAMA0A026RKN3 
ProdomA0A026RKN3 
UniProtKBA0A094VR05SubName: Full=E14 prophage predicted DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKO56696.1};
InterProA0A094VR05 
PFAMA0A094VR05 
ProdomA0A094VR05 
UniProtKBP75975RecName: Full=Putative lambdoid prophage e14 transcriptional regulatory protein;
InterProP75975 
PFAMP75975 
ProdomP75975 
UniProtKBQ79EM1RecName: Full=Putative lambdoid prophage e14 transcriptional regulatory protein;
InterProQ79EM1 
PFAMQ79EM1 
ProdomQ79EM1 
UniProtKBA0A2D0B3X0SubName: Full=DNA-binding transcriptional regulator {ECO:0000313|EMBL:VTQ22732.1}SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:NAO89754.1}SubName: Full=Transcriptional reg
InterProA0A2D0B3X0 
PFAMA0A2D0B3X0 
ProdomA0A2D0B3X0 
UniProtKBC9QYG6SubName: Full=E14 prophage; predicted DNA-binding transcriptional regulator;
InterProC9QYG6 
PFAMC9QYG6 
ProdomC9QYG6 
UniProtKBA0A8F9H860SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:QYE24173.1}
InterProA0A8F9H860 
PFAMA0A8F9H860 
ProdomA0A8F9H860 
UniProtKBA0A8E0KA88SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EYZ93610.1}
InterProA0A8E0KA88 
PFAMA0A8E0KA88 
ProdomA0A8E0KA88 
UniProtKBA0A5Y3BJ01SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:ECG9117518.1}
InterProA0A5Y3BJ01 
PFAMA0A5Y3BJ01 
ProdomA0A5Y3BJ01 
UniProtKBA0A5Q3T8M7SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:QGL40506.1}
InterProA0A5Q3T8M7 
PFAMA0A5Q3T8M7 
ProdomA0A5Q3T8M7 
UniProtKBA0A8F8DHU3SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:QXZ35332.1}
InterProA0A8F8DHU3 
PFAMA0A8F8DHU3 
ProdomA0A8F8DHU3 
UniProtKBA0A3V9XB14SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EAA9538587.1}
InterProA0A3V9XB14 
PFAMA0A3V9XB14 
ProdomA0A3V9XB14 
UniProtKBA0A7U4RZ86SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKK38535.2}
InterProA0A7U4RZ86 
PFAMA0A7U4RZ86 
ProdomA0A7U4RZ86 
UniProtKBF4T726SubName: Full=Putative uncharacterized protein;
InterProF4T726 
PFAMF4T726 
ProdomF4T726 
UniProtKBQ79EM1Predicted DNA-binding transcriptional regulator
InterProQ79EM1 
PFAMQ79EM1 
ProdomQ79EM1 
UniProtKBP75975E14 prophage; predicted DNA-binding transcriptional regulator
InterProP75975 
PFAMP75975 
ProdomP75975 
UniProtKBI2WY82SubName: Full=Uncharacterized protein;
InterProI2WY82 
PFAMI2WY82 
ProdomI2WY82 
UniProtKBI0ZQU8SubName: Full=Uncharacterized protein;
InterProI0ZQU8 
PFAMI0ZQU8 
ProdomI0ZQU8 
UniProtKBG2F4F1SubName: Full=E14 prophage; predicted DNA-binding transcriptional regulator;
InterProG2F4F1 
PFAMG2F4F1 
ProdomG2F4F1 
UniProtKBP75975RecName: Full=Putative lambdoid prophage e14 transcriptional regulatory protein;
InterProP75975 
PFAMP75975 
ProdomP75975 
UniProtKBP75975.2YMFT_ECOLI RecName: Full=Uncharacterized protein ymfT
InterProP75975.2 
PFAMP75975.2 
ProdomP75975.2 
UniProtKBQ79EM1RecName: Full=Putative lambdoid prophage e14 transcriptional regulatory protein;
InterProQ79EM1 
PFAMQ79EM1 
ProdomQ79EM1 
RefSeqNP_415664.2 e14 prophage; predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
RefSeqZP_07505065.1 e14 prophage; predicted DNA-binding transcriptional regulator [Escherichia coli M605]
RefSeqAP_001772.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
GenPept817574456e14 prophage, putative DNA-binding transcriptional regulator
GenPept808708643transcriptional regulator
GenPept808704271transcriptional regulator
GenPept808699896transcriptional regulator
GenPept732684934transcriptional regulator
GenPept682118682e14 prophage; putative DNA-binding transcriptional regulator
GenPept549812648e14 prophage; predicted DNA-binding transcriptional regulator
GenPept331040946hypothetical protein ECIG_04450
GenPept315135779e14 prophage; predicted DNA-binding transcriptional regulator
GenPept307146633 e14 prophage; predicted DNA-binding transcriptional regulator [Escherichia coli M605]
GenPept260449715conserved hypothetical protein
GenPept817578598e14 prophage, putative DNA-binding transcriptional regulator
GenPept817582737e14 prophage, putative DNA-binding transcriptional regulator
GenPept90111222 e14 prophage; predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
GenPept899726484transcriptional regulator
GenPept899730879transcriptional regulator
GenPept899722129transcriptional regulator
GenPept89107992 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
GenPept87081841e14 prophage; putative DNA-binding transcriptional regulator
GenPept85674849predicted DNA-binding transcriptional regulator
GenPept817591019e14 prophage, putative DNA-binding transcriptional regulator
GenPept817586878e14 prophage, putative DNA-binding transcriptional regulator
GenPept121957937CROE_ECOLI RecName: Full=Putative lambdoid prophage e14 transcriptional regulatory protein
GenBankACX40137.1 conserved hypothetical protein [Escherichia coli DH1]
GenBankAAC74230.2 e14 prophage; predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]