University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link C4ZS77.1
Original Database ID ref NP_415678.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation iram_ecobw recname: full=anti-adapter
protein iram
Sequence Length 107

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region1-73
Protein Length107
Template PDB Code4hn7A
Template Region1-78
Sequence Identity18%
E-Value0.000021
GA3410.63
MPQS0.903743
z-DOPE-0.46
TSVMod MethodMSALL
TSVMod RMSD2.884
TSVMod NO350.798
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4hn7
DBALI4hn7A 
JenaImageLibrary4hn7 
Target Sequence
UniProtKBC4ZS77RecName: Full=Anti-adapter protein IraM;
InterProC4ZS77 
PFAMC4ZS77 
ProdomC4ZS77 
UniProtKBH9UTH5RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProH9UTH5 
PFAMH9UTH5 
ProdomH9UTH5 
UniProtKBI4TJN2RecName: Full=Anti-adapter protein IraM;
InterProI4TJN2 
PFAMI4TJN2 
ProdomI4TJN2 
UniProtKBD8AP09RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProD8AP09 
PFAMD8AP09 
ProdomD8AP09 
UniProtKBB1IUD0RecName: Full=Anti-adapter protein IraM;
InterProB1IUD0 
PFAMB1IUD0 
ProdomB1IUD0 
UniProtKBB1XA47RecName: Full=Anti-adapter protein IraM;
InterProB1XA47 
PFAMB1XA47 
ProdomB1XA47 
UniProtKBA0A0E1LWJ0RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProA0A0E1LWJ0 
PFAMA0A0E1LWJ0 
ProdomA0A0E1LWJ0 
UniProtKBE6P3Y5RecName: Full=Anti-adapter protein IraM;
InterProE6P3Y5 
PFAME6P3Y5 
ProdomE6P3Y5 
UniProtKBF4SGD9RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProF4SGD9 
PFAMF4SGD9 
ProdomF4SGD9 
UniProtKBG2F201RecName: Full=Anti-adapter protein IraM;
InterProG2F201 
PFAMG2F201 
ProdomG2F201 
UniProtKBP75987RecName: Full=Anti-adapter protein IraM;AltName: Full=Enhancing lycopene biosynthesis protein 1;
InterProP75987 
PFAMP75987 
ProdomP75987 
UniProtKBM2N4B9RecName: Full=Anti-adapter protein IraM;
InterProM2N4B9 
PFAMM2N4B9 
ProdomM2N4B9 
UniProtKBI2I5D7RecName: Full=Anti-adapter protein IraM;
InterProI2I5D7 
PFAMI2I5D7 
ProdomI2I5D7 
UniProtKBD8B0N3RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProD8B0N3 
PFAMD8B0N3 
ProdomD8B0N3 
UniProtKBF9QYE8RecName: Full=Anti-adapter protein IraM;
InterProF9QYE8 
PFAMF9QYE8 
ProdomF9QYE8 
UniProtKBE1HJI5RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProE1HJI5 
PFAME1HJI5 
ProdomE1HJI5 
UniProtKBW8SRD3RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProW8SRD3 
PFAMW8SRD3 
ProdomW8SRD3 
UniProtKBE3PKE7RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProE3PKE7 
PFAME3PKE7 
ProdomE3PKE7 
UniProtKBV1B6Q9RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProV1B6Q9 
PFAMV1B6Q9 
ProdomV1B6Q9 
UniProtKBD8C5P0RecName: Full=Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199};
InterProD8C5P0 
PFAMD8C5P0 
ProdomD8C5P0 
UniProtKBQ2MBH3RecName: Full=Anti-adapter protein IraM;AltName: Full=Enhancing lycopene biosynthesis protein 1;
InterProQ2MBH3 
PFAMQ2MBH3 
ProdomQ2MBH3 
UniProtKBA0A1X3IPJ6Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199}
InterProA0A1X3IPJ6 
PFAMA0A1X3IPJ6 
ProdomA0A1X3IPJ6 
UniProtKBA0A1X3JJH2Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199}
InterProA0A1X3JJH2 
PFAMA0A1X3JJH2 
ProdomA0A1X3JJH2 
UniProtKBA0A236GP91Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199}
InterProA0A236GP91 
PFAMA0A236GP91 
ProdomA0A236GP91 
UniProtKBA0A8F9MZK5SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:QYE37678.1}
InterProA0A8F9MZK5 
PFAMA0A8F9MZK5 
ProdomA0A8F9MZK5 
UniProtKBE6P3Y5RecName: Full=Anti-adapter protein IraM;
InterProE6P3Y5 
PFAME6P3Y5 
ProdomE6P3Y5 
UniProtKBA0A8H9DJT8SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:EFY9880662.1}
InterProA0A8H9DJT8 
PFAMA0A8H9DJT8 
ProdomA0A8H9DJT8 
UniProtKBA0A7B5I8F8SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:HAJ6402879.1}
InterProA0A7B5I8F8 
PFAMA0A7B5I8F8 
ProdomA0A7B5I8F8 
UniProtKBA0A8F9MH22SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:QYE24163.1}
InterProA0A8F9MH22 
PFAMA0A8F9MH22 
ProdomA0A8F9MH22 
UniProtKBA0A8F8GYB6SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:QXZ35322.1}
InterProA0A8F8GYB6 
PFAMA0A8F8GYB6 
ProdomA0A8F8GYB6 
UniProtKBA0A8A5HHU9SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:QTF29324.1}
InterProA0A8A5HHU9 
PFAMA0A8A5HHU9 
ProdomA0A8A5HHU9 
UniProtKBA0A5Q3T7R3Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199}AltName: Full=Sigma S-regulator RssC {ECO:0000256|HAMAP-Rule:MF_01199}
InterProA0A5Q3T7R3 
PFAMA0A5Q3T7R3 
ProdomA0A5Q3T7R3 
UniProtKBA0A7Z8FI37SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:TFB47421.1}
InterProA0A7Z8FI37 
PFAMA0A7Z8FI37 
ProdomA0A7Z8FI37 
UniProtKBA0A6B8WX43Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199}
InterProA0A6B8WX43 
PFAMA0A6B8WX43 
ProdomA0A6B8WX43 
UniProtKBA0A7D4MB87Anti-adapter protein IraM {ECO:0000256|HAMAP-Rule:MF_01199}
InterProA0A7D4MB87 
PFAMA0A7D4MB87 
ProdomA0A7D4MB87 
UniProtKBA0A8A5H2V2SubName: Full=Anti-adapter protein IraM {ECO:0000313|EMBL:QTF24733.1}
InterProA0A8A5H2V2 
PFAMA0A8A5H2V2 
ProdomA0A8A5H2V2 
UniProtKBQ2MBH3Hypothetical protein elbA
InterProQ2MBH3 
PFAMQ2MBH3 
ProdomQ2MBH3 
UniProtKBD8B0N3RecName: Full=Anti-adapter protein IraM 1;
InterProD8B0N3 
PFAMD8B0N3 
ProdomD8B0N3 
UniProtKBG2F201RecName: Full=Anti-adapter protein IraM;
InterProG2F201 
PFAMG2F201 
ProdomG2F201 
UniProtKBI4TJN2SubName: Full=Uncharacterized protein;
InterProI4TJN2 
PFAMI4TJN2 
ProdomI4TJN2 
UniProtKBD8AP09RecName: Full=Anti-adapter protein IraM 2;
InterProD8AP09 
PFAMD8AP09 
ProdomD8AP09 
UniProtKBD8C5P0RecName: Full=Anti-adapter protein IraM 2;
InterProD8C5P0 
PFAMD8C5P0 
ProdomD8C5P0 
UniProtKBC4ZS77SubName: Full=Predicted protein;
InterProC4ZS77 
PFAMC4ZS77 
ProdomC4ZS77 
UniProtKBE1HJI5RecName: Full=Anti-adapter protein IraM;
InterProE1HJI5 
PFAME1HJI5 
ProdomE1HJI5 
UniProtKBE3PKE7RecName: Full=Anti-adapter protein IraM;
InterProE3PKE7 
PFAME3PKE7 
ProdomE3PKE7 
UniProtKBB1XA47SubName: Full=Predicted protein;
InterProB1XA47 
PFAMB1XA47 
ProdomB1XA47 
UniProtKBI2I5D7SubName: Full=Anti-adapter protein IraM;
InterProI2I5D7 
PFAMI2I5D7 
ProdomI2I5D7 
UniProtKBB1IUD0RecName: Full=Anti-adapter protein IraM;
InterProB1IUD0 
PFAMB1IUD0 
ProdomB1IUD0 
UniProtKBF9QYE8RecName: Full=Anti-adapter protein IraM;
InterProF9QYE8 
PFAMF9QYE8 
ProdomF9QYE8 
UniProtKBH9UTH5SubName: Full=Anti-adapter protein iraM;
InterProH9UTH5 
PFAMH9UTH5 
ProdomH9UTH5 
UniProtKBF4SGD9RecName: Full=Anti-adapter protein IraM;
InterProF4SGD9 
PFAMF4SGD9 
ProdomF4SGD9 
UniProtKBC4ZS77.1IRAM_ECOBW RecName: Full=Anti-adapter protein iraM
InterProC4ZS77.1 
PFAMC4ZS77.1 
ProdomC4ZS77.1 
UniProtKBB1XA47.1IRAM_ECODH RecName: Full=Anti-adapter protein iraM
InterProB1XA47.1 
PFAMB1XA47.1 
ProdomB1XA47.1 
UniProtKBB1XA47RecName: Full=Anti-adapter protein IraM {ECO:0000255|HAMAP-Rule:MF_01199};
InterProB1XA47 
PFAMB1XA47 
ProdomB1XA47 
UniProtKBC4ZS77RecName: Full=Anti-adapter protein IraM {ECO:0000255|HAMAP-Rule:MF_01199};
InterProC4ZS77 
PFAMC4ZS77 
ProdomC4ZS77 
UniProtKBQ2MBH3RecName: Full=Anti-adapter protein IraM;AltName: Full=Enhancing lycopene biosynthesis protein 1;
InterProQ2MBH3 
PFAMQ2MBH3 
ProdomQ2MBH3 
UniProtKBP75987RecName: Full=Anti-adapter protein IraM;AltName: Full=Enhancing lycopene biosynthesis protein 1;
InterProP75987 
PFAMP75987 
ProdomP75987 
UniProtKBP75987.1IRAM_ECOLI RecName: Full=Anti-adapter protein iraM; AltName: Full=Enhancing lycopene biosynthesis protein 1
InterProP75987.1 
PFAMP75987.1 
ProdomP75987.1 
RefSeqYP_001725424.1 hypothetical protein EcolC_2466 [Escherichia coli ATCC 8739]
RefSeqZP_05437030.1 hypothetical protein E4_07324 [Escherichia sp. 4_1_40B]
RefSeqZP_07244548.1 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 146-1]
RefSeqZP_07497128.1 hypothetical protein EcolH7_06515 [Escherichia coli H736]
RefSeqAP_001785.1 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
RefSeqZP_07167905.1 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 175-1]
RefSeqZP_07163089.1 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 116-1]
RefSeqYP_002926187.1 hypothetical protein BWG_0985 [Escherichia coli BW2952]
RefSeqYP_001730108.1 hypothetical protein ECDH10B_1209 [Escherichia coli str. K-12 substr. DH10B]
RefSeqNP_415678.1 RpoS stabilzer during Mg starvation, anti-RssB factor [Escherichia coli str. K-12 substr. MG1655]
RefSeqZP_07192632.1 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 196-1]
GenPept300949038 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 116-1]
GenPept549812656RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept383103309Anti-adapter protein iraM
GenPept331038479enhancing lycopene biosynthesis protein 1
GenPept169888623predicted protein
GenPept1787407RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept226711570IRAM_ECODH RecName: Full=Anti-adapter protein iraM
GenPept85674854hypothetical protein
GenPept315135794predicted protein
GenPept299877549 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 196-1]
GenPept300317561 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 175-1]
GenPept300451511 putative enhancing lycopene biosynthesis protein 1 [Escherichia coli MS 116-1]
GenPept557271504hypothetical protein BN896_0985
GenPept595583646anti-adapter protein IraM
GenPept899726498anti-adapter protein IraM
GenPept899730893anti-adapter protein IraM
GenPept932859061hypothetical protein BN1843_15570
GenPept817591029RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept817578608RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept817586888RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept817582747RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept89108005 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept817574466RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept817147641anti-adapter protein IraM
GenPept808734519anti-adapter protein IraM
GenPept808730108anti-adapter protein IraM
GenPept808721788anti-adapter protein IraM
GenPept808717418anti-adapter protein IraM
GenPept682118692RpoS stabilzer during Mg starvation, anti-RssB factor
GenPept595595618anti-adapter protein IraM
GenPept595591018anti-adapter protein IraM