University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P75993
Original Database ID ref NP_415684.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=probable two-component-system
connector protein arir;
Sequence Length 88

Dataset Information:

The newest dataset for this sequence was created on 2015-05-03. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green)
or unreliable (red).
 
Target Region25-86
Protein Length88
Template PDB Code2oxlA
Template Region25-86
Sequence Identity100%
E-Value0
GA3411
MPQS1.94885
z-DOPE-1.56
TSVMod MethodMSALL
TSVMod RMSD0.864
TSVMod NO350.956
DatasetMW-ModWeb20150502_D1
ModPipe VersionSVN.r1597
Model Date2015-05-03

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2oxlstructure and function of the e. coli protein ymgb: a protein critical for biofilm formation and acid resistance
DBALI2oxlA 
JenaImageLibrary2oxl 
Target Sequence
UniProtKBE9XXX2SubName: Full=Regulatory protein ariR;
InterProE9XXX2 
PFAME9XXX2 
ProdomE9XXX2 
UniProtKBA0A069XS55SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KDU30412.1};
InterProA0A069XS55 
PFAMA0A069XS55 
ProdomA0A069XS55 
UniProtKBA0A070DAY6SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:KDV38308.1};
InterProA0A070DAY6 
PFAMA0A070DAY6 
ProdomA0A070DAY6 
UniProtKBA0A070SQX5SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KDX20111.1};
InterProA0A070SQX5 
PFAMA0A070SQX5 
ProdomA0A070SQX5 
UniProtKBA0A070XTX4SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KDX82747.1};
InterProA0A070XTX4 
PFAMA0A070XTX4 
ProdomA0A070XTX4 
UniProtKBA0A071C8E9SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KDZ12305.1};
InterProA0A071C8E9 
PFAMA0A071C8E9 
ProdomA0A071C8E9 
UniProtKBA0A071DIT7SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KDZ41072.1};
InterProA0A071DIT7 
PFAMA0A071DIT7 
ProdomA0A071DIT7 
UniProtKBA0A074HY96SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEO00158.1};
InterProA0A074HY96 
PFAMA0A074HY96 
ProdomA0A074HY96 
UniProtKBA0A074IPS4SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEO02600.1};
InterProA0A074IPS4 
PFAMA0A074IPS4 
ProdomA0A074IPS4 
UniProtKBA0A080ELY6SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEN50167.1};
InterProA0A080ELY6 
PFAMA0A080ELY6 
ProdomA0A080ELY6 
UniProtKBA0A080G507SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEN71839.1};
InterProA0A080G507 
PFAMA0A080G507 
ProdomA0A080G507 
UniProtKBA0A028E596SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EZE55397.1};
InterProA0A028E596 
PFAMA0A028E596 
ProdomA0A028E596 
UniProtKBA0A028C691SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EZE31156.1};
InterProA0A028C691 
PFAMA0A028C691 
ProdomA0A028C691 
UniProtKBA7ZKT2RecName: Full=Regulatory protein AriR;
InterProA7ZKT2 
PFAMA7ZKT2 
ProdomA7ZKT2 
UniProtKBE9TJ32SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EGB86742.1};
InterProE9TJ32 
PFAME9TJ32 
ProdomE9TJ32 
UniProtKBF4VDH2SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGI46923.1};
InterProF4VDH2 
PFAMF4VDH2 
ProdomF4VDH2 
UniProtKBF8XHZ1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGU95643.1};
InterProF8XHZ1 
PFAMF8XHZ1 
ProdomF8XHZ1 
UniProtKBF8YEL6SubName: Full=Putative uncharacterized protein;
InterProF8YEL6 
PFAMF8YEL6 
ProdomF8YEL6 
UniProtKBF4SGE4SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGI10704.1};
InterProF4SGE4 
PFAMF4SGE4 
ProdomF4SGE4 
UniProtKBG1ZY44SubName: Full=Putative uncharacterized protein;
InterProG1ZY44 
PFAMG1ZY44 
ProdomG1ZY44 
UniProtKBG1Y831SubName: Full=Putative uncharacterized protein;
InterProG1Y831 
PFAMG1Y831 
ProdomG1Y831 
UniProtKBG2BMD6SubName: Full=Putative uncharacterized protein;
InterProG2BMD6 
PFAMG2BMD6 
ProdomG2BMD6 
UniProtKBF9QYE2SubName: Full=Putative uncharacterized protein;
InterProF9QYE2 
PFAMF9QYE2 
ProdomF9QYE2 
UniProtKBD8AP03SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK15125.1};
InterProD8AP03 
PFAMD8AP03 
ProdomD8AP03 
UniProtKBA0A0A8UA47SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CEK04384.1};
InterProA0A0A8UA47 
PFAMA0A0A8UA47 
ProdomA0A0A8UA47 
UniProtKBA0A0E0TXE9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE56077.1};
InterProA0A0E0TXE9 
PFAMA0A0E0TXE9 
ProdomA0A0E0TXE9 
UniProtKBD7YEE3SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK04333.1};
InterProD7YEE3 
PFAMD7YEE3 
ProdomD7YEE3 
UniProtKBC8UNS3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI35423.1};
InterProC8UNS3 
PFAMC8UNS3 
ProdomC8UNS3 
UniProtKBB7LGS1SubName: Full=YmgB protein {ECO:0000313|EMBL:CAU97115.1};
InterProB7LGS1 
PFAMB7LGS1 
ProdomB7LGS1 
UniProtKBA7ZZ97RecName: Full=Regulatory protein AriR;
InterProA7ZZ97 
PFAMA7ZZ97 
ProdomA7ZZ97 
UniProtKBE1HU78SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK88580.1};
InterProE1HU78 
PFAME1HU78 
ProdomE1HU78 
UniProtKBD8ELF5SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK51682.1};
InterProD8ELF5 
PFAMD8ELF5 
ProdomD8ELF5 
UniProtKBE7J2J5SubName: Full=Putative uncharacterized protein;
InterProE7J2J5 
PFAME7J2J5 
ProdomE7J2J5 
UniProtKBE7IPE9SubName: Full=Putative uncharacterized protein;
InterProE7IPE9 
PFAME7IPE9 
ProdomE7IPE9 
UniProtKBE8YDF9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADX51288.1};
InterProE8YDF9 
PFAME8YDF9 
ProdomE8YDF9 
UniProtKBE9WRS2SubName: Full=Regulatory protein ariR;
InterProE9WRS2 
PFAME9WRS2 
ProdomE9WRS2 
UniProtKBC9QYE9SubName: Full=Uncharacterized protein;
InterProC9QYE9 
PFAMC9QYE9 
ProdomC9QYE9 
UniProtKBD6HVN7SubName: Full=Regulatory protein ariR {ECO:0000313|EMBL:EFE63724.2};
InterProD6HVN7 
PFAMD6HVN7 
ProdomD6HVN7 
UniProtKBB7LX78SubName: Full=Uncharacterized protein;
InterProB7LX78 
PFAMB7LX78 
ProdomB7LX78 
UniProtKBA0A0E1LWJ5SubName: Full=RcsB connector protein for regulation of biofilm and acid-resistance {ECO:0000313|EMBL:AJF56037.1};
InterProA0A0E1LWJ5 
PFAMA0A0E1LWJ5 
ProdomA0A0E1LWJ5 
UniProtKBA0A0E1SXH1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EDU64253.1};
InterProA0A0E1SXH1 
PFAMA0A0E1SXH1 
ProdomA0A0E1SXH1 
UniProtKBA0A0G3HJW1SubName: Full=RcsB connector protein for regulation of biofilm and acid-resistance protein {ECO:0000313|EMBL:AKK13055.1};
InterProA0A0G3HJW1 
PFAMA0A0G3HJW1 
ProdomA0A0G3HJW1 
UniProtKBA0A0H3X6X5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKM34713.1};
InterProA0A0H3X6X5 
PFAMA0A0H3X6X5 
ProdomA0A0H3X6X5 
UniProtKBB3ICE7SubName: Full=Putative uncharacterized protein;
InterProB3ICE7 
PFAMB3ICE7 
ProdomB3ICE7 
UniProtKBB3WRP5SubName: Full=Putative uncharacterized protein;
InterProB3WRP5 
PFAMB3WRP5 
ProdomB3WRP5 
UniProtKBB2NBQ4SubName: Full=Putative uncharacterized protein;
InterProB2NBQ4 
PFAMB2NBQ4 
ProdomB2NBQ4 
UniProtKBB1XA53RecName: Full=Regulatory protein AriR;
InterProB1XA53 
PFAMB1XA53 
ProdomB1XA53 
UniProtKBC6EGU8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT29479.1};
InterProC6EGU8 
PFAMC6EGU8 
ProdomC6EGU8 
UniProtKBC4ZS83SubName: Full=Predicted protein;
InterProC4ZS83 
PFAMC4ZS83 
ProdomC4ZS83 
UniProtKBE9X4T8SubName: Full=Regulatory protein ariR;
InterProE9X4T8 
PFAME9X4T8 
ProdomE9X4T8 
UniProtKBE9W5A7SubName: Full=Regulatory protein ariR;
InterProE9W5A7 
PFAME9W5A7 
ProdomE9W5A7 
UniProtKBA0A025C5B7SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EYV10628.1};
InterProA0A025C5B7 
PFAMA0A025C5B7 
ProdomA0A025C5B7 
UniProtKBG2CJ53SubName: Full=Putative uncharacterized protein;
InterProG2CJ53 
PFAMG2CJ53 
ProdomG2CJ53 
UniProtKBA0A027U3X4SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EZD32260.1};
InterProA0A027U3X4 
PFAMA0A027U3X4 
ProdomA0A027U3X4 
UniProtKBA0A070DQG2SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:KDV43288.1};
InterProA0A070DQG2 
PFAMA0A070DQG2 
ProdomA0A070DQG2 
UniProtKBA0A073GSL8SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEJ63861.1};
InterProA0A073GSL8 
PFAMA0A073GSL8 
ProdomA0A073GSL8 
UniProtKBA0A080GU26SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEN91416.1};
InterProA0A080GU26 
PFAMA0A080GU26 
ProdomA0A080GU26 
UniProtKBA0A0E2TX08SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EZE18759.1};
InterProA0A0E2TX08 
PFAMA0A0E2TX08 
ProdomA0A0E2TX08 
UniProtKBB6I9M2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAG76733.1};
InterProB6I9M2 
PFAMB6I9M2 
ProdomB6I9M2 
UniProtKBC8U6S9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI30103.1};
InterProC8U6S9 
PFAMC8U6S9 
ProdomC8U6S9 
UniProtKBD7ZPJ8SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK27178.1};
InterProD7ZPJ8 
PFAMD7ZPJ8 
ProdomD7ZPJ8 
UniProtKBE3PKF1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBJ00770.1};
InterProE3PKF1 
PFAME3PKF1 
ProdomE3PKF1 
UniProtKBF9CGG0SubName: Full=Putative uncharacterized protein;
InterProF9CGG0 
PFAMF9CGG0 
ProdomF9CGG0 
UniProtKBF3WJP7SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EGI94361.1};
InterProF3WJP7 
PFAMF3WJP7 
ProdomF3WJP7 
UniProtKBE1JCK9SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK66419.1};
InterProE1JCK9 
PFAME1JCK9 
ProdomE1JCK9 
UniProtKBA0A025FN90SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EYV53493.1};
InterProA0A025FN90 
PFAMA0A025FN90 
ProdomA0A025FN90 
UniProtKBE1I482SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK72848.1};
InterProE1I482 
PFAME1I482 
ProdomE1I482 
UniProtKBA0A026GSS9SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EYY72609.1};
InterProA0A026GSS9 
PFAMA0A026GSS9 
ProdomA0A026GSS9 
UniProtKBA0A0E1ZTY3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIL35317.1};
InterProA0A0E1ZTY3 
PFAMA0A0E1ZTY3 
ProdomA0A0E1ZTY3 
UniProtKBE0IV97SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFH10887.1};
InterProE0IV97 
PFAME0IV97 
ProdomE0IV97 
UniProtKBF4ULL0SubName: Full=Putative uncharacterized protein;
InterProF4ULL0 
PFAMF4ULL0 
ProdomF4ULL0 
UniProtKBA0A026V8J2SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EZA38152.1};
InterProA0A026V8J2 
PFAMA0A026V8J2 
ProdomA0A026V8J2 
UniProtKBA0A073FZS8SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEJ49562.1};
InterProA0A073FZS8 
PFAMA0A073FZS8 
ProdomA0A073FZS8 
UniProtKBA0A0E2TTN3SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EYV12000.1};
InterProA0A0E2TTN3 
PFAMA0A0E2TTN3 
ProdomA0A0E2TTN3 
UniProtKBC8TQH6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:BAI24976.1};
InterProC8TQH6 
PFAMC8TQH6 
ProdomC8TQH6 
UniProtKBE6BLL0SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFU34851.1};
InterProE6BLL0 
PFAME6BLL0 
ProdomE6BLL0 
UniProtKBF4M2X5SubName: Full=Putative uncharacterized protein;
InterProF4M2X5 
PFAMF4M2X5 
ProdomF4M2X5 
UniProtKBA0A0E3H2S4SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:AKA90171.1};
InterProA0A0E3H2S4 
PFAMA0A0E3H2S4 
ProdomA0A0E3H2S4 
UniProtKBA0A0H4SC27SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKP83878.1};
InterProA0A0H4SC27 
PFAMA0A0H4SC27 
ProdomA0A0H4SC27 
UniProtKBB3ISG9SubName: Full=Putative uncharacterized protein;
InterProB3ISG9 
PFAMB3ISG9 
ProdomB3ISG9 
UniProtKBC5W445SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT29479.1};
InterProC5W445 
PFAMC5W445 
ProdomC5W445 
UniProtKBC6UG34SubName: Full=Putative uncharacterized protein ymgB;
InterProC6UG34 
PFAMC6UG34 
ProdomC6UG34 
UniProtKBD7XUX7SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFJ84823.1};
InterProD7XUX7 
PFAMD7XUX7 
ProdomD7XUX7 
UniProtKBD7Y2E8SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFJ98216.1};
InterProD7Y2E8 
PFAMD7Y2E8 
ProdomD7Y2E8 
UniProtKBB1IUC4RecName: Full=Regulatory protein AriR;
InterProB1IUC4 
PFAMB1IUC4 
ProdomB1IUC4 
UniProtKBE1IU67SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFO57084.1};
InterProE1IU67 
PFAME1IU67 
ProdomE1IU67 
UniProtKBE7T1P2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFW54114.1};
InterProE7T1P2 
PFAME7T1P2 
ProdomE7T1P2 
UniProtKBA0A0E0Y1X9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFS74847.1};
InterProA0A0E0Y1X9 
PFAMA0A0E0Y1X9 
ProdomA0A0E0Y1X9 
UniProtKBA0A080IBW5SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEO26686.1};
InterProA0A080IBW5 
PFAMA0A080IBW5 
ProdomA0A080IBW5 
UniProtKBA0A079FUF8SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KDY65084.1};
InterProA0A079FUF8 
PFAMA0A079FUF8 
ProdomA0A079FUF8 
UniProtKBD8B0N9SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFJ67351.1};
InterProD8B0N9 
PFAMD8B0N9 
ProdomD8B0N9 
UniProtKBF9HVJ5SubName: Full=Regulatory protein AriR;SubName: Full=Uncharacterized protein;
InterProF9HVJ5 
PFAMF9HVJ5 
ProdomF9HVJ5 
UniProtKBG1ZHP7SubName: Full=Putative uncharacterized protein;
InterProG1ZHP7 
PFAMG1ZHP7 
ProdomG1ZHP7 
UniProtKBF4NHD9SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EGJ05352.1};
InterProF4NHD9 
PFAMF4NHD9 
ProdomF4NHD9 
UniProtKBA0A028AA44SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:EZE07738.1};
InterProA0A028AA44 
PFAMA0A028AA44 
ProdomA0A028AA44 
UniProtKBA0A029PQ97SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:EZK23923.1};
InterProA0A029PQ97 
PFAMA0A029PQ97 
ProdomA0A029PQ97 
UniProtKBA0A070FIB3SubName: Full=Two-component-system connector protein AriR {ECO:0000313|EMBL:KDV64917.1};
InterProA0A070FIB3 
PFAMA0A070FIB3 
ProdomA0A070FIB3 
UniProtKBA0A071BQ72SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KDY83638.1};
InterProA0A071BQ72 
PFAMA0A071BQ72 
ProdomA0A071BQ72 
UniProtKBA0A073TU01SubName: Full=Putative two-component-system connector protein AriR {ECO:0000313|EMBL:KEL24679.1};
InterProA0A073TU01 
PFAMA0A073TU01 
ProdomA0A073TU01 
UniProtKBD8E359SubName: Full=Regulatory protein AriR {ECO:0000313|EMBL:EFK47442.1};
InterProD8E359 
PFAMD8E359 
ProdomD8E359