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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76097.1
Original Database ID ref NP_415940.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation ydcj_ecoli recname: full=uncharacterized
protein ydcj
Sequence Length 447

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

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Target Region2-446
Protein Length447
Template PDB Code2rjbA
Template Region2-446
Sequence Identity100%
E-Value0
GA3411
MPQS2.14513
z-DOPE-1.19
TSVMod MethodMSALL
TSVMod RMSD0.5
TSVMod NO350.933
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Sequence Model Coverage Summary
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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2rjbcrystal structure of uncharacterized protein ydcj (sf1787) from shigella flexneri which includes domain duf1338. northeast structural genomics consortium target sfr276
DBALI2rjbA 
JenaImageLibrary2rjb 
Target Sequence
UniProtKBE6AYB2SubName: Full=Putative uncharacterized protein {ECO:0000313|EMBL:EFV00121.1};
InterProE6AYB2 
PFAME6AYB2 
ProdomE6AYB2 
UniProtKBA0A080GYC1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN91056.1};
InterProA0A080GYC1 
PFAMA0A080GYC1 
ProdomA0A080GYC1 
UniProtKBA0A080IAN1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEO25597.1};
InterProA0A080IAN1 
PFAMA0A080IAN1 
ProdomA0A080IAN1 
UniProtKBA0A0G3HW24SubName: Full=Putative metalloenzyme protein {ECO:0000313|EMBL:AKK17554.1};
InterProA0A0G3HW24 
PFAMA0A0G3HW24 
ProdomA0A0G3HW24 
UniProtKBA0A0I0H681SubName: Full=Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CSN42853.1};
InterProA0A0I0H681 
PFAMA0A0I0H681 
ProdomA0A0I0H681 
UniProtKBH4UIQ9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV59459.1};
InterProH4UIQ9 
PFAMH4UIQ9 
ProdomH4UIQ9 
UniProtKBG2F6W5SubName: Full=Putative uncharacterized protein;
InterProG2F6W5 
PFAMG2F6W5 
ProdomG2F6W5 
UniProtKBG2CLU1SubName: Full=Putative uncharacterized protein;
InterProG2CLU1 
PFAMG2CLU1 
ProdomG2CLU1 
UniProtKBH5MS92SubName: Full=Uncharacterized protein;
InterProH5MS92 
PFAMH5MS92 
ProdomH5MS92 
UniProtKBH4X4I0SubName: Full=Uncharacterized protein;
InterProH4X4I0 
PFAMH4X4I0 
ProdomH4X4I0 
UniProtKBI0ZRM0SubName: Full=Uncharacterized protein;
InterProI0ZRM0 
PFAMI0ZRM0 
ProdomI0ZRM0 
UniProtKBA0A079FJS1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY59595.1};
InterProA0A079FJS1 
PFAMA0A079FJS1 
ProdomA0A079FJS1 
UniProtKBA0A079F2N2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY50999.1};
InterProA0A079F2N2 
PFAMA0A079F2N2 
ProdomA0A079F2N2 
UniProtKBG1Y8R1SubName: Full=Putative uncharacterized protein;
InterProG1Y8R1 
PFAMG1Y8R1 
ProdomG1Y8R1 
UniProtKBL4A136SubName: Full=Uncharacterized protein;
InterProL4A136 
PFAML4A136 
ProdomL4A136 
UniProtKBL8C3J2SubName: Full=Putative cytoplasmic protein;
InterProL8C3J2 
PFAML8C3J2 
ProdomL8C3J2 
UniProtKBE8YA25SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADX51000.1};
InterProE8YA25 
PFAME8YA25 
ProdomE8YA25 
UniProtKBL8CDC1SubName: Full=Putative cytoplasmic protein;
InterProL8CDC1 
PFAML8CDC1 
ProdomL8CDC1 
UniProtKBE9X442SubName: Full=Putative uncharacterized protein;
InterProE9X442 
PFAME9X442 
ProdomE9X442 
UniProtKBE9XYS2SubName: Full=Putative uncharacterized protein;
InterProE9XYS2 
PFAME9XYS2 
ProdomE9XYS2 
UniProtKBM7VTK2SubName: Full=Uncharacterized protein;
InterProM7VTK2 
PFAMM7VTK2 
ProdomM7VTK2 
UniProtKBF9R2V8SubName: Full=Putative uncharacterized protein;
InterProF9R2V8 
PFAMF9R2V8 
ProdomF9R2V8 
UniProtKBM7V9Q3SubName: Full=Uncharacterized protein;
InterProM7V9Q3 
PFAMM7V9Q3 
ProdomM7V9Q3 
UniProtKBL3R0G1SubName: Full=Uncharacterized protein;
InterProL3R0G1 
PFAML3R0G1 
ProdomL3R0G1 
UniProtKBH4WAF3SubName: Full=Uncharacterized protein;
InterProH4WAF3 
PFAMH4WAF3 
ProdomH4WAF3 
UniProtKBG2B8F3SubName: Full=Putative uncharacterized protein;
InterProG2B8F3 
PFAMG2B8F3 
ProdomG2B8F3 
UniProtKBC6UH50SubName: Full=Putative uncharacterized protein ydcJ;
InterProC6UH50 
PFAMC6UH50 
ProdomC6UH50 
UniProtKBA0A024L3T2SubName: Full=Conserved protein {ECO:0000313|EMBL:CDP71573.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AJB51517.1};
InterProA0A024L3T2 
PFAMA0A024L3T2 
ProdomA0A024L3T2 
UniProtKBA0A026UJB2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZA29010.1};
InterProA0A026UJB2 
PFAMA0A026UJB2 
ProdomA0A026UJB2 
UniProtKBA0A029KVD7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZJ77268.1};
InterProA0A029KVD7 
PFAMA0A029KVD7 
ProdomA0A029KVD7 
UniProtKBA0A029MV48SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EZK01691.1};
InterProA0A029MV48 
PFAMA0A029MV48 
ProdomA0A029MV48 
UniProtKBA0A069XGJ5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU28259.1};
InterProA0A069XGJ5 
PFAMA0A069XGJ5 
ProdomA0A069XGJ5 
UniProtKBA0A069YRL4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDU49906.1};
InterProA0A069YRL4 
PFAMA0A069YRL4 
ProdomA0A069YRL4 
UniProtKBA0A070DBX3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDV38032.1};
InterProA0A070DBX3 
PFAMA0A070DBX3 
ProdomA0A070DBX3 
UniProtKBA0A070SLP4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX17714.1};
InterProA0A070SLP4 
PFAMA0A070SLP4 
ProdomA0A070SLP4 
UniProtKBA0A070Y2E7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDX85341.1};
InterProA0A070Y2E7 
PFAMA0A070Y2E7 
ProdomA0A070Y2E7 
UniProtKBL3KQH7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ELE01105.1};
InterProL3KQH7 
PFAML3KQH7 
ProdomL3KQH7 
UniProtKBL3LKU6SubName: Full=Uncharacterized protein;
InterProL3LKU6 
PFAML3LKU6 
ProdomL3LKU6 
UniProtKBC5W3L2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT29247.1};
InterProC5W3L2 
PFAMC5W3L2 
ProdomC5W3L2 
UniProtKBI2VPZ0SubName: Full=PF07063 domain protein;
InterProI2VPZ0 
PFAMI2VPZ0 
ProdomI2VPZ0 
UniProtKBI2X4Z0SubName: Full=PF07063 domain protein {ECO:0000313|EMBL:EII44060.1};
InterProI2X4Z0 
PFAMI2X4Z0 
ProdomI2X4Z0 
UniProtKBI2R3H3SubName: Full=Uncharacterized protein;
InterProI2R3H3 
PFAMI2R3H3 
ProdomI2R3H3 
UniProtKBI4TLX1SubName: Full=Uncharacterized protein;
InterProI4TLX1 
PFAMI4TLX1 
ProdomI4TLX1 
UniProtKBI4UH38SubName: Full=Uncharacterized protein;
InterProI4UH38 
PFAMI4UH38 
ProdomI4UH38 
UniProtKBB1XDD5SubName: Full=Conserved protein;
InterProB1XDD5 
PFAMB1XDD5 
ProdomB1XDD5 
UniProtKBI4NJ94SubName: Full=Uncharacterized protein;
InterProI4NJ94 
PFAMI4NJ94 
ProdomI4NJ94 
UniProtKBB3XAI5SubName: Full=Putative uncharacterized protein;
InterProB3XAI5 
PFAMB3XAI5 
ProdomB3XAI5 
UniProtKBB7LYQ8SubName: Full=Uncharacterized protein;
InterProB7LYQ8 
PFAMB7LYQ8 
ProdomB7LYQ8 
UniProtKBJ2EJH1SubName: Full=Uncharacterized protein;
InterProJ2EJH1 
PFAMJ2EJH1 
ProdomJ2EJH1 
UniProtKBA0A071AFH7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY58397.1};
InterProA0A071AFH7 
PFAMA0A071AFH7 
ProdomA0A071AFH7 
UniProtKBL4P300SubName: Full=Uncharacterized protein;
InterProL4P300 
PFAML4P300 
ProdomL4P300 
UniProtKBA0A071BRR3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY84717.1};
InterProA0A071BRR3 
PFAMA0A071BRR3 
ProdomA0A071BRR3 
UniProtKBF4M7C3SubName: Full=Putative uncharacterized protein;
InterProF4M7C3 
PFAMF4M7C3 
ProdomF4M7C3 
UniProtKBA0A077ZJE3SubName: Full=DUF1338 domain containing protein {ECO:0000313|EMBL:CDW59854.1};
InterProA0A077ZJE3 
PFAMA0A077ZJE3 
ProdomA0A077ZJE3 
UniProtKBA0A0E0TZ68SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE56419.1};
InterProA0A0E0TZ68 
PFAMA0A0E0TZ68 
ProdomA0A0E0TZ68 
UniProtKBH4VVN4SubName: Full=Uncharacterized protein;
InterProH4VVN4 
PFAMH4VVN4 
ProdomH4VVN4 
UniProtKBI2HZI7SubName: Full=Uncharacterized protein;
InterProI2HZI7 
PFAMI2HZI7 
ProdomI2HZI7 
UniProtKBI4JAB5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86174.1};
InterProI4JAB5 
PFAMI4JAB5 
ProdomI4JAB5 
UniProtKBI6F973SubName: Full=Uncharacterized protein;
InterProI6F973 
PFAMI6F973 
ProdomI6F973 
UniProtKBC4ZVG3SubName: Full=Conserved protein;
InterProC4ZVG3 
PFAMC4ZVG3 
ProdomC4ZVG3 
UniProtKBI2P7W4SubName: Full=Uncharacterized protein;
InterProI2P7W4 
PFAMI2P7W4 
ProdomI2P7W4 
UniProtKBD8AS90SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK13994.1};
InterProD8AS90 
PFAMD8AS90 
ProdomD8AS90 
UniProtKBM2PPQ3SubName: Full=Uncharacterized protein;
InterProM2PPQ3 
PFAMM2PPQ3 
ProdomM2PPQ3 
UniProtKBE0IVN9SubName: Full=Conserved protein {ECO:0000313|EMBL:ADT75029.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFH11182.1};
InterProE0IVN9 
PFAME0IVN9 
ProdomE0IVN9 
UniProtKBL3VWR4SubName: Full=Uncharacterized protein;
InterProL3VWR4 
PFAML3VWR4 
ProdomL3VWR4 
UniProtKBA0A071CKA4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDZ12139.1};
InterProA0A071CKA4 
PFAMA0A071CKA4 
ProdomA0A071CKA4 
UniProtKBD6HWL0SubName: Full=YdcJ protein {ECO:0000313|EMBL:EFE64047.2};
InterProD6HWL0 
PFAMD6HWL0 
ProdomD6HWL0 
UniProtKBA0A073T8D6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEL21708.1};
InterProA0A073T8D6 
PFAMA0A073T8D6 
ProdomA0A073T8D6 
UniProtKBI2T8Z0SubName: Full=PF07063 domain protein;
InterProI2T8Z0 
PFAMI2T8Z0 
ProdomI2T8Z0 
UniProtKBD7ZMU9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFK27770.1};
InterProD7ZMU9 
PFAMD7ZMU9 
ProdomD7ZMU9 
UniProtKBL4ZZE3SubName: Full=Uncharacterized protein;
InterProL4ZZE3 
PFAML4ZZE3 
ProdomL4ZZE3 
UniProtKBA0A074IFZ2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KEN99469.1};
InterProA0A074IFZ2 
PFAMA0A074IFZ2 
ProdomA0A074IFZ2 
UniProtKBH4VFD3SubName: Full=Uncharacterized protein;
InterProH4VFD3 
PFAMH4VFD3 
ProdomH4VFD3 
UniProtKBI2ZY10SubName: Full=PF07063 domain protein;
InterProI2ZY10 
PFAMI2ZY10 
ProdomI2ZY10 
UniProtKBL2ZBU9SubName: Full=Uncharacterized protein;
InterProL2ZBU9 
PFAML2ZBU9 
ProdomL2ZBU9 
UniProtKBL4PGA5SubName: Full=Uncharacterized protein;
InterProL4PGA5 
PFAML4PGA5 
ProdomL4PGA5 
UniProtKBL4WPK1SubName: Full=Uncharacterized protein;
InterProL4WPK1 
PFAML4WPK1 
ProdomL4WPK1 
UniProtKBI2Y2U8SubName: Full=PF07063 domain protein;
InterProI2Y2U8 
PFAMI2Y2U8 
ProdomI2Y2U8 
UniProtKBG2AF07SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EGW92971.1};
InterProG2AF07 
PFAMG2AF07 
ProdomG2AF07 
UniProtKBB3IES7SubName: Full=Putative uncharacterized protein;
InterProB3IES7 
PFAMB3IES7 
ProdomB3IES7 
UniProtKBK5GSN0SubName: Full=Uncharacterized protein;
InterProK5GSN0 
PFAMK5GSN0 
ProdomK5GSN0 
UniProtKBK5H814SubName: Full=Uncharacterized protein;
InterProK5H814 
PFAMK5H814 
ProdomK5H814 
UniProtKBC6EET9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ACT29247.1};
InterProC6EET9 
PFAMC6EET9 
ProdomC6EET9 
UniProtKBC9QWT5SubName: Full=Uncharacterized protein;
InterProC9QWT5 
PFAMC9QWT5 
ProdomC9QWT5 
UniProtKBL3TUE3SubName: Full=Uncharacterized protein;
InterProL3TUE3 
PFAML3TUE3 
ProdomL3TUE3 
UniProtKBL3VGJ1SubName: Full=Uncharacterized protein;
InterProL3VGJ1 
PFAML3VGJ1 
ProdomL3VGJ1 
UniProtKBD8AWR8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFJ68705.1};
InterProD8AWR8 
PFAMD8AWR8 
ProdomD8AWR8 
UniProtKBG2AUC1SubName: Full=Putative uncharacterized protein;
InterProG2AUC1 
PFAMG2AUC1 
ProdomG2AUC1 
UniProtKBI0VMZ5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EID65511.1};
InterProI0VMZ5 
PFAMI0VMZ5 
ProdomI0VMZ5 
UniProtKBH9USR5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AFG40558.1};
InterProH9USR5 
PFAMH9USR5 
ProdomH9USR5 
UniProtKBE7J1W3SubName: Full=Putative uncharacterized protein;
InterProE7J1W3 
PFAME7J1W3 
ProdomE7J1W3 
UniProtKBE9WSM1SubName: Full=Putative uncharacterized protein;
InterProE9WSM1 
PFAME9WSM1 
ProdomE9WSM1 
UniProtKBM8QW40SubName: Full=Uncharacterized protein;
InterProM8QW40 
PFAMM8QW40 
ProdomM8QW40 
UniProtKBG0FF91SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEJ56465.1};
InterProG0FF91 
PFAMG0FF91 
ProdomG0FF91 
UniProtKBA0A079D5P1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY15782.1};
InterProA0A079D5P1 
PFAMA0A079D5P1 
ProdomA0A079D5P1 
UniProtKBA0A079GF06SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KDY89145.1};
InterProA0A079GF06 
PFAMA0A079GF06 
ProdomA0A079GF06 
UniProtKBA0A0E2THE1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EYV05419.1};
InterProA0A0E2THE1 
PFAMA0A0E2THE1 
ProdomA0A0E2THE1 
UniProtKBH0QCM5SubName: Full=Conserved protein;
InterProH0QCM5 
PFAMH0QCM5 
ProdomH0QCM5 
UniProtKBH4UZX3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EHV61068.1};
InterProH4UZX3 
PFAMH4UZX3 
ProdomH4UZX3 
UniProtKBD8BR18SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EFI90889.1};
InterProD8BR18 
PFAMD8BR18 
ProdomD8BR18