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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76106.2
Original Database ID ref NP_415954.2
Organism Escherichia coli, Klebsiella oxytoca, etc.
Annotation yncn_ecoli recname: full=upf0395
protein yncn
Sequence Length 58

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region1-57
Protein Length58
Template PDB Code4p78C
Template Region1-63
Sequence Identity26%
E-Value2.3e-9
GA3411
MPQS1.33016
z-DOPE-1.35
TSVMod MethodMSALL
TSVMod RMSD2.166
TSVMod NO350.919
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4p78
DBALI4p78C 
JenaImageLibrary4p78 
Target Sequence
UniProtKBC6EES6SubName: Full=YcfA family protein {ECO:0000313|EMBL:ACT29234.1};
InterProC6EES6 
PFAMC6EES6 
ProdomC6EES6 
UniProtKBI2P7V0SubName: Full=Uncharacterized protein;
InterProI2P7V0 
PFAMI2P7V0 
ProdomI2P7V0 
UniProtKBI4NL89SubName: Full=Uncharacterized protein;
InterProI4NL89 
PFAMI4NL89 
ProdomI4NL89 
UniProtKBI2P3M0SubName: Full=Uncharacterized protein;
InterProI2P3M0 
PFAMI2P3M0 
ProdomI2P3M0 
UniProtKBE9Y9S4SubName: Full=YcfA protein {ECO:0000313|EMBL:EGB68827.1};
InterProE9Y9S4 
PFAME9Y9S4 
ProdomE9Y9S4 
UniProtKBK4VCW0SubName: Full=Uncharacterized protein;
InterProK4VCW0 
PFAMK4VCW0 
ProdomK4VCW0 
UniProtKBK4V649SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EJE61189.1};
InterProK4V649 
PFAMK4V649 
ProdomK4V649 
UniProtKBI5PYB1SubName: Full=Putative mRNA interferase HicA;
InterProI5PYB1 
PFAMI5PYB1 
ProdomI5PYB1 
UniProtKBL3EDB8SubName: Full=Uncharacterized protein;
InterProL3EDB8 
PFAML3EDB8 
ProdomL3EDB8 
UniProtKBL2ZAV5SubName: Full=Uncharacterized protein;
InterProL2ZAV5 
PFAML2ZAV5 
ProdomL2ZAV5 
UniProtKBL3KS99SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ELE01119.1};
InterProL3KS99 
PFAML3KS99 
ProdomL3KS99 
UniProtKBI2R3I6SubName: Full=Uncharacterized protein;
InterProI2R3I6 
PFAMI2R3I6 
ProdomI2R3I6 
UniProtKBF4SIB7SubName: Full=Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EGI11032.1};
InterProF4SIB7 
PFAMF4SIB7 
ProdomF4SIB7 
UniProtKBE8YA12SubName: Full=YcfA family protein {ECO:0000313|EMBL:ADX50987.1};
InterProE8YA12 
PFAME8YA12 
ProdomE8YA12 
UniProtKBS0UFJ4SubName: Full=Uncharacterized protein;
InterProS0UFJ4 
PFAMS0UFJ4 
ProdomS0UFJ4 
UniProtKBS1ADG4SubName: Full=Uncharacterized protein;
InterProS1ADG4 
PFAMS1ADG4 
ProdomS1ADG4 
UniProtKBC9QW28SubName: Full=Uncharacterized protein;SubName: Full=YcfA family protein;
InterProC9QW28 
PFAMC9QW28 
ProdomC9QW28 
UniProtKBS1CT76SubName: Full=Uncharacterized protein;
InterProS1CT76 
PFAMS1CT76 
ProdomS1CT76 
UniProtKBE0IVM6SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ADT75042.1};SubName: Full=mRNA interferase toxin of the HicAB toxin-antitoxin system {ECO:0000313|EMBL:AFH11195.1};
InterProE0IVM6 
PFAME0IVM6 
ProdomE0IVM6 
UniProtKBE1HLQ9SubName: Full=Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFK91138.1};
InterProE1HLQ9 
PFAME1HLQ9 
ProdomE1HLQ9 
UniProtKBS1F9G9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOV79490.1};
InterProS1F9G9 
PFAMS1F9G9 
ProdomS1F9G9 
UniProtKBE1IMH8SubName: Full=Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFO59332.1};
InterProE1IMH8 
PFAME1IMH8 
ProdomE1IMH8 
UniProtKBS1F8X9SubName: Full=Uncharacterized protein;
InterProS1F8X9 
PFAMS1F8X9 
ProdomS1F8X9 
UniProtKBM9I178SubName: Full=Putative mRNA interferase HicA;
InterProM9I178 
PFAMM9I178 
ProdomM9I178 
UniProtKBL2W5C0SubName: Full=Uncharacterized protein;
InterProL2W5C0 
PFAML2W5C0 
ProdomL2W5C0 
UniProtKBI4QZ54SubName: Full=Uncharacterized protein;
InterProI4QZ54 
PFAMI4QZ54 
ProdomI4QZ54 
UniProtKBA0A023L2A4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KLX38113.1};SubName: Full=mRNA interferase {ECO:0000313|EMBL:KIG78962.1};
InterProA0A023L2A4 
PFAMA0A023L2A4 
ProdomA0A023L2A4 
UniProtKBA0A070D287SubName: Full=mRNA interferase {ECO:0000313|EMBL:KDV34610.1};
InterProA0A070D287 
PFAMA0A070D287 
ProdomA0A070D287 
UniProtKBA0A070FH13SubName: Full=mRNA interferase {ECO:0000313|EMBL:KDV65215.1};
InterProA0A070FH13 
PFAMA0A070FH13 
ProdomA0A070FH13 
UniProtKBA0A073GTW1SubName: Full=Putative mRNA interferase HicA {ECO:0000313|EMBL:KEJ69248.1};
InterProA0A073GTW1 
PFAMA0A073GTW1 
ProdomA0A073GTW1 
UniProtKBA0A0A0F810SubName: Full=UPF0395 protein {ECO:0000313|EMBL:KGM58959.1};
InterProA0A0A0F810 
PFAMA0A0A0F810 
ProdomA0A0A0F810 
UniProtKBA0A0E1LYV9SubName: Full=mRNA interferase toxin of the HicAB toxin-antitoxin system {ECO:0000313|EMBL:AJF56273.1};
InterProA0A0E1LYV9 
PFAMA0A0E1LYV9 
ProdomA0A0E1LYV9 
UniProtKBA0A0E3MVR2SubName: Full=Putative mRNA interferase HicA {ECO:0000313|EMBL:AKA90477.1};
InterProA0A0E3MVR2 
PFAMA0A0E3MVR2 
ProdomA0A0E3MVR2 
UniProtKBA0A0G3HHQ2SubName: Full=mRNA interferase toxin of the HicAB toxin-antitoxin system protein {ECO:0000313|EMBL:AKK12839.1};
InterProA0A0G3HHQ2 
PFAMA0A0G3HHQ2 
ProdomA0A0G3HHQ2 
UniProtKBP0CJ67RecName: Full=Probable mRNA interferase HicA;EC=3.1.-.-;AltName: Full=Endoribonuclease HicA;AltName: Full=Toxin HicA;
InterProP0CJ67 
PFAMP0CJ67 
ProdomP0CJ67 
UniProtKBP76106RecName: Full=Probable mRNA interferase HicA;EC=3.1.-.-;AltName: Full=Endoribonuclease HicA;AltName: Full=Toxin HicA;
InterProP76106 
PFAMP76106 
ProdomP76106 
UniProtKBB1ISL0SubName: Full=YcfA family protein;
InterProB1ISL0 
PFAMB1ISL0 
ProdomB1ISL0 
UniProtKBE9WEE6SubName: Full=YcfA protein;
InterProE9WEE6 
PFAME9WEE6 
ProdomE9WEE6 
UniProtKBM7UKC3SubName: Full=Uncharacterized protein;
InterProM7UKC3 
PFAMM7UKC3 
ProdomM7UKC3 
UniProtKBL3UY85SubName: Full=Uncharacterized protein;
InterProL3UY85 
PFAML3UY85 
ProdomL3UY85 
UniProtKBL3VJ02SubName: Full=Uncharacterized protein;
InterProL3VJ02 
PFAML3VJ02 
ProdomL3VJ02 
UniProtKBL3RLC5SubName: Full=Uncharacterized protein;
InterProL3RLC5 
PFAML3RLC5 
ProdomL3RLC5 
UniProtKBL4G7V3SubName: Full=Uncharacterized protein;
InterProL4G7V3 
PFAML4G7V3 
ProdomL4G7V3 
UniProtKBL4FEM5SubName: Full=Uncharacterized protein;
InterProL4FEM5 
PFAML4FEM5 
ProdomL4FEM5 
UniProtKBL4MYZ5SubName: Full=Uncharacterized protein;
InterProL4MYZ5 
PFAML4MYZ5 
ProdomL4MYZ5 
UniProtKBL4BXJ5SubName: Full=Uncharacterized protein;
InterProL4BXJ5 
PFAML4BXJ5 
ProdomL4BXJ5 
UniProtKBL3QZZ7SubName: Full=Uncharacterized protein;
InterProL3QZZ7 
PFAML3QZZ7 
ProdomL3QZZ7 
UniProtKBM2NWC2SubName: Full=Uncharacterized protein;
InterProM2NWC2 
PFAMM2NWC2 
ProdomM2NWC2 
UniProtKBL9IG90SubName: Full=Putative mRNA interferase HicA {ECO:0000313|EMBL:ELW35767.1};
InterProL9IG90 
PFAML9IG90 
ProdomL9IG90 
UniProtKBQ2MBB8RecName: Full=Probable mRNA interferase HicA;EC=3.1.-.-;AltName: Full=Endoribonuclease HicA;AltName: Full=Toxin HicA;
InterProQ2MBB8 
PFAMQ2MBB8 
ProdomQ2MBB8 
UniProtKBS0W1X0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOU67799.1};
InterProS0W1X0 
PFAMS0W1X0 
ProdomS0W1X0 
UniProtKBH1ED59SubName: Full=Putative uncharacterized protein;
InterProH1ED59 
PFAMH1ED59 
ProdomH1ED59 
UniProtKBE1HY60SubName: Full=Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFK74988.1};
InterProE1HY60 
PFAME1HY60 
ProdomE1HY60 
UniProtKBI2HZH2SubName: Full=Uncharacterized protein;
InterProI2HZH2 
PFAMI2HZH2 
ProdomI2HZH2 
UniProtKBI4PKD3SubName: Full=Uncharacterized protein;
InterProI4PKD3 
PFAMI4PKD3 
ProdomI4PKD3 
UniProtKBL2V529SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ELC09505.1};
InterProL2V529 
PFAML2V529 
ProdomL2V529 
UniProtKBL3LIP7SubName: Full=Uncharacterized protein;
InterProL3LIP7 
PFAML3LIP7 
ProdomL3LIP7 
UniProtKBL4AZ82SubName: Full=Uncharacterized protein;
InterProL4AZ82 
PFAML4AZ82 
ProdomL4AZ82 
UniProtKBL4P3S5SubName: Full=Uncharacterized protein;
InterProL4P3S5 
PFAML4P3S5 
ProdomL4P3S5 
UniProtKBM5HS73SubName: Full=Uncharacterized protein;
InterProM5HS73 
PFAMM5HS73 
ProdomM5HS73 
UniProtKBL4WNX7SubName: Full=Uncharacterized protein;
InterProL4WNX7 
PFAML4WNX7 
ProdomL4WNX7 
UniProtKBS0T359SubName: Full=Uncharacterized protein;
InterProS0T359 
PFAMS0T359 
ProdomS0T359 
UniProtKBS1DM36SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOV63167.1};
InterProS1DM36 
PFAMS1DM36 
ProdomS1DM36 
UniProtKBC5W3M5SubName: Full=YcfA family protein {ECO:0000313|EMBL:ACT29234.1};
InterProC5W3M5 
PFAMC5W3M5 
ProdomC5W3M5 
UniProtKBB2PLM9SubName: Full=Conserved domain protein;
InterProB2PLM9 
PFAMB2PLM9 
ProdomB2PLM9 
UniProtKBH1F4J6SubName: Full=Putative uncharacterized protein;
InterProH1F4J6 
PFAMH1F4J6 
ProdomH1F4J6 
UniProtKBB2NQD0SubName: Full=Conserved domain protein;
InterProB2NQD0 
PFAMB2NQD0 
ProdomB2NQD0 
UniProtKBH0QCN8SubName: Full=Uncharacterized protein;
InterProH0QCN8 
PFAMH0QCN8 
ProdomH0QCN8 
UniProtKBL3TSQ4SubName: Full=Uncharacterized protein;
InterProL3TSQ4 
PFAML3TSQ4 
ProdomL3TSQ4 
UniProtKBN2T3X9SubName: Full=Putative mRNA interferase HicA;
InterProN2T3X9 
PFAMN2T3X9 
ProdomN2T3X9 
UniProtKBD7Y0G5SubName: Full=Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFJ98875.1};
InterProD7Y0G5 
PFAMD7Y0G5 
ProdomD7Y0G5 
UniProtKBH6MG04SubName: Full=Uncharacterized protein;
InterProH6MG04 
PFAMH6MG04 
ProdomH6MG04 
UniProtKBK4Y4M0SubName: Full=Uncharacterized protein;
InterProK4Y4M0 
PFAMK4Y4M0 
ProdomK4Y4M0 
UniProtKBL3WZK5SubName: Full=Uncharacterized protein;
InterProL3WZK5 
PFAML3WZK5 
ProdomL3WZK5 
UniProtKBM5IJG0SubName: Full=Uncharacterized protein;
InterProM5IJG0 
PFAMM5IJG0 
ProdomM5IJG0 
UniProtKBS0YLB0SubName: Full=Uncharacterized protein;
InterProS0YLB0 
PFAMS0YLB0 
ProdomS0YLB0 
UniProtKBS0ZPH3SubName: Full=Uncharacterized protein;
InterProS0ZPH3 
PFAMS0ZPH3 
ProdomS0ZPH3 
UniProtKBL3VTG3SubName: Full=Uncharacterized protein;
InterProL3VTG3 
PFAML3VTG3 
ProdomL3VTG3 
UniProtKBL4HP92SubName: Full=Uncharacterized protein;
InterProL4HP92 
PFAML4HP92 
ProdomL4HP92 
UniProtKBL4IUD0SubName: Full=Uncharacterized protein;
InterProL4IUD0 
PFAML4IUD0 
ProdomL4IUD0 
UniProtKBM2MUC4SubName: Full=Uncharacterized protein;
InterProM2MUC4 
PFAMM2MUC4 
ProdomM2MUC4 
UniProtKBL5I6L5SubName: Full=Uncharacterized protein;
InterProL5I6L5 
PFAML5I6L5 
ProdomL5I6L5 
UniProtKBM7WFB1SubName: Full=Uncharacterized protein;
InterProM7WFB1 
PFAMM7WFB1 
ProdomM7WFB1 
UniProtKBB1XDE8SubName: Full=Predicted protein;
InterProB1XDE8 
PFAMB1XDE8 
ProdomB1XDE8 
UniProtKBN4B3K2SubName: Full=Putative mRNA interferase HicA;
InterProN4B3K2 
PFAMN4B3K2 
ProdomN4B3K2 
UniProtKBB3BWL9SubName: Full=Putative uncharacterized protein;
InterProB3BWL9 
PFAMB3BWL9 
ProdomB3BWL9 
UniProtKBN2I1F6SubName: Full=Putative mRNA interferase HicA;
InterProN2I1F6 
PFAMN2I1F6 
ProdomN2I1F6 
UniProtKBE9XYT7SubName: Full=YcfA protein;
InterProE9XYT7 
PFAME9XYT7 
ProdomE9XYT7 
UniProtKBL3I9X5SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ELD71212.1};
InterProL3I9X5 
PFAML3I9X5 
ProdomL3I9X5 
UniProtKBL3HU01SubName: Full=Uncharacterized protein;
InterProL3HU01 
PFAML3HU01 
ProdomL3HU01 
UniProtKBC6UU21SubName: Full=Uncharacterized protein;
InterProC6UU21 
PFAMC6UU21 
ProdomC6UU21 
UniProtKBD8EJW9SubName: Full=Toxin-antitoxin system, toxin component, HicA family {ECO:0000313|EMBL:EFK52079.1};
InterProD8EJW9 
PFAMD8EJW9 
ProdomD8EJW9 
UniProtKBS1GXN3SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOW08070.1};
InterProS1GXN3 
PFAMS1GXN3 
ProdomS1GXN3 
UniProtKBE3PLT8SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CBJ01012.1};
InterProE3PLT8 
PFAME3PLT8 
ProdomE3PLT8 
UniProtKBH4FHP9SubName: Full=Uncharacterized protein;
InterProH4FHP9 
PFAMH4FHP9 
ProdomH4FHP9 
UniProtKBI4JAC9SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86188.1};
InterProI4JAC9 
PFAMI4JAC9 
ProdomI4JAC9 
UniProtKBI4NI24SubName: Full=Uncharacterized protein;
InterProI4NI24 
PFAMI4NI24 
ProdomI4NI24 
UniProtKBK4V6A3SubName: Full=Uncharacterized protein;
InterProK4V6A3 
PFAMK4V6A3 
ProdomK4V6A3 
UniProtKBK4W810SubName: Full=Uncharacterized protein;
InterProK4W810 
PFAMK4W810 
ProdomK4W810 
UniProtKBC4ZVH6SubName: Full=Predicted protein;
InterProC4ZVH6 
PFAMC4ZVH6 
ProdomC4ZVH6