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Sequence Information

Primary Database Link P76108.1
Original Database ID ref NP_415957.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation ydcs_ecoli recname: full=putative
abc transporter periplasmic-binding
protein yd cs; flags: precursor
Sequence Length 381

Dataset Information:

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Model Information

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Target Region33-372
Protein Length381
Template PDB Code4jdfA
Template Region29-365
Sequence Identity22%
E-Value0
GA3411
MPQS1.14489
z-DOPE-0.48
TSVMod MethodMSALL
TSVMod RMSD5.728
TSVMod NO350.663
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4jdf
DBALI4jdfA 
JenaImageLibrary4jdf 
Target Sequence
UniProtKBE3PLU1SubName: Full=ABC transporter, substrate-binding protein {ECO:0000313|EMBL:CBJ01015.1};
InterProE3PLU1 
PFAME3PLU1 
ProdomE3PLU1 
UniProtKBH4UZZ2SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EHV61006.1};
InterProH4UZZ2 
PFAMH4UZZ2 
ProdomH4UZZ2 
UniProtKBH5GBD8SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5GBD8 
PFAMH5GBD8 
ProdomH5GBD8 
UniProtKBH4UIS9SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EHV59479.1};
InterProH4UIS9 
PFAMH4UIS9 
ProdomH4UIS9 
UniProtKBG2BN90SubName: Full=Bacterial extracellular solute-binding family protein;
InterProG2BN90 
PFAMG2BN90 
ProdomG2BN90 
UniProtKBH5JY45SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5JY45 
PFAMH5JY45 
ProdomH5JY45 
UniProtKBH5I3A8SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5I3A8 
PFAMH5I3A8 
ProdomH5I3A8 
UniProtKBH5HN68SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5HN68 
PFAMH5HN68 
ProdomH5HN68 
UniProtKBI2HZH0SubName: Full=Spermidine/putrescine transporter subunit;
InterProI2HZH0 
PFAMI2HZH0 
ProdomI2HZH0 
UniProtKBI0ZRK1SubName: Full=Bacterial extracellular solute-binding family protein;
InterProI0ZRK1 
PFAMI0ZRK1 
ProdomI0ZRK1 
UniProtKBI2TTG3SubName: Full=ABC transporter, solute-binding protein;
InterProI2TTG3 
PFAMI2TTG3 
ProdomI2TTG3 
UniProtKBH4VFF2SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH4VFF2 
PFAMH4VFF2 
ProdomH4VFF2 
UniProtKBG2CLW2SubName: Full=Bacterial extracellular solute-binding family protein;
InterProG2CLW2 
PFAMG2CLW2 
ProdomG2CLW2 
UniProtKBG2AUE1SubName: Full=Bacterial extracellular solute-binding family protein;
InterProG2AUE1 
PFAMG2AUE1 
ProdomG2AUE1 
UniProtKBL2ZB21SubName: Full=Spermidine/putrescine transporter subunit;
InterProL2ZB21 
PFAML2ZB21 
ProdomL2ZB21 
UniProtKBL3QYI3SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3QYI3 
PFAML3QYI3 
ProdomL3QYI3 
UniProtKBL3RKT2SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3RKT2 
PFAML3RKT2 
ProdomL3RKT2 
UniProtKBL3TS78SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3TS78 
PFAML3TS78 
ProdomL3TS78 
UniProtKBE9XYU0SubName: Full=Extracellular solute-binding protein;
InterProE9XYU0 
PFAME9XYU0 
ProdomE9XYU0 
UniProtKBE9Y9S1SubName: Full=Extracellular solute-binding protein {ECO:0000313|EMBL:EGB68824.1};
InterProE9Y9S1 
PFAME9Y9S1 
ProdomE9Y9S1 
UniProtKBL3WYP9SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3WYP9 
PFAML3WYP9 
ProdomL3WYP9 
UniProtKBF9R2T9SubName: Full=Putative spermidine/putrescine transporter subunit;
InterProF9R2T9 
PFAMF9R2T9 
ProdomF9R2T9 
UniProtKBL3VU56SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3VU56 
PFAML3VU56 
ProdomL3VU56 
UniProtKBK3I3T2SubName: Full=Putative ABC transporter periplasmic-binding protein YdcS;
InterProK3I3T2 
PFAMK3I3T2 
ProdomK3I3T2 
UniProtKBH9USQ0SubName: Full=Putative ABC transporter periplasmic-binding protein ydcS {ECO:0000313|EMBL:AFG40543.1};
InterProH9USQ0 
PFAMH9USQ0 
ProdomH9USQ0 
UniProtKBG2B8H3SubName: Full=Bacterial extracellular solute-binding family protein;
InterProG2B8H3 
PFAMG2B8H3 
ProdomG2B8H3 
UniProtKBA0A073T8A4SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEL21727.1};
InterProA0A073T8A4 
PFAMA0A073T8A4 
ProdomA0A073T8A4 
UniProtKBA0A074HU58SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEN99488.1};
InterProA0A074HU58 
PFAMA0A074HU58 
ProdomA0A074HU58 
UniProtKBA0A074IJT7SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEO12710.1};
InterProA0A074IJT7 
PFAMA0A074IJT7 
ProdomA0A074IJT7 
UniProtKBA0A079D5N0SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDY15762.1};
InterProA0A079D5N0 
PFAMA0A079D5N0 
ProdomA0A079D5N0 
UniProtKBA0A079F7J2SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDY50366.1};
InterProA0A079F7J2 
PFAMA0A079F7J2 
ProdomA0A079F7J2 
UniProtKBA0A079FF99SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDY58016.1};
InterProA0A079FF99 
PFAMA0A079FF99 
ProdomA0A079FF99 
UniProtKBA0A080EL86SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEN49805.1};
InterProA0A080EL86 
PFAMA0A080EL86 
ProdomA0A080EL86 
UniProtKBA0A080F8E7SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEN57712.1};
InterProA0A080F8E7 
PFAMA0A080F8E7 
ProdomA0A080F8E7 
UniProtKBA0A080GYE9SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEN91076.1};
InterProA0A080GYE9 
PFAMA0A080GYE9 
ProdomA0A080GYE9 
UniProtKBA0A080IAP9SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEO25617.1};
InterProA0A080IAP9 
PFAMA0A080IAP9 
ProdomA0A080IAP9 
UniProtKBA0A073GWE8SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEJ69251.1};
InterProA0A073GWE8 
PFAMA0A073GWE8 
ProdomA0A073GWE8 
UniProtKBA0A071DFM6SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDZ35400.1};
InterProA0A071DFM6 
PFAMA0A071DFM6 
ProdomA0A071DFM6 
UniProtKBA0A071AH09SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDY57316.1};
InterProA0A071AH09 
PFAMA0A071AH09 
ProdomA0A071AH09 
UniProtKBB1XDF1SubName: Full=Predicted spermidine/putrescine transporter subunit; periplasmic-binding component of ABC superfamily;
InterProB1XDF1 
PFAMB1XDF1 
ProdomB1XDF1 
UniProtKBI2YHV2SubName: Full=ABC transporter, solute-binding protein;
InterProI2YHV2 
PFAMI2YHV2 
ProdomI2YHV2 
UniProtKBA0A029KVA8SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EZJ77238.1};
InterProA0A029KVA8 
PFAMA0A029KVA8 
ProdomA0A029KVA8 
UniProtKBA0A029MWH9SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EZK01532.1};
InterProA0A029MWH9 
PFAMA0A029MWH9 
ProdomA0A029MWH9 
UniProtKBA0A066RBW4SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:CEE07845.1};SubName: Full=Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHI266
InterProA0A066RBW4 
PFAMA0A066RBW4 
ProdomA0A066RBW4 
UniProtKBA0A069XGL1SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDU28279.1};
InterProA0A069XGL1 
PFAMA0A069XGL1 
ProdomA0A069XGL1 
UniProtKBA0A069YRN2SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDU49926.1};
InterProA0A069YRN2 
PFAMA0A069YRN2 
ProdomA0A069YRN2 
UniProtKBA0A070FIA9SubName: Full=Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDV65218.1};
InterProA0A070FIA9 
PFAMA0A070FIA9 
ProdomA0A070FIA9 
UniProtKBA0A070UZ09SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDX47165.1};
InterProA0A070UZ09 
PFAMA0A070UZ09 
ProdomA0A070UZ09 
UniProtKBA0A070Y315SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KDX85360.1};
InterProA0A070Y315 
PFAMA0A070Y315 
ProdomA0A070Y315 
UniProtKBA0A0A0F748SubName: Full=Putative ABC transporter periplasmic-binding protein YdcS {ECO:0000313|EMBL:KGM58956.1};
InterProA0A0A0F748 
PFAMA0A0A0F748 
ProdomA0A0A0F748 
UniProtKBL3HRD6SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3HRD6 
PFAML3HRD6 
ProdomL3HRD6 
UniProtKBA0A0E1LWW4SubName: Full=Putative ABC transporter periplasmic-binding protein {ECO:0000313|EMBL:AJF56276.1};
InterProA0A0E1LWW4 
PFAMA0A0E1LWW4 
ProdomA0A0E1LWW4 
UniProtKBF4SIC0SubName: Full=Putative ABC transporter periplasmic-binding protein YdcS {ECO:0000313|EMBL:EGI11035.1};
InterProF4SIC0 
PFAMF4SIC0 
ProdomF4SIC0 
UniProtKBH0QCP1SubName: Full=Predicted spermidine/putrescine transporter subunit;
InterProH0QCP1 
PFAMH0QCP1 
ProdomH0QCP1 
UniProtKBH5GRF9SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5GRF9 
PFAMH5GRF9 
ProdomH5GRF9 
UniProtKBH5MF15SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5MF15 
PFAMH5MF15 
ProdomH5MF15 
UniProtKBI2U776SubName: Full=ABC transporter, solute-binding protein;
InterProI2U776 
PFAMI2U776 
ProdomI2U776 
UniProtKBB3XAK2SubName: Full=ABC transporter, periplasmic substrate-binding protein;
InterProB3XAK2 
PFAMB3XAK2 
ProdomB3XAK2 
UniProtKBC4ZVH9SubName: Full=Predicted spermidine/putrescine transporter subunit;
InterProC4ZVH9 
PFAMC4ZVH9 
ProdomC4ZVH9 
UniProtKBC6EES3SubName: Full=Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACT29231.1};
InterProC6EES3 
PFAMC6EES3 
ProdomC6EES3 
UniProtKBI2WPG9SubName: Full=ABC transporter, solute-binding protein {ECO:0000313|EMBL:EII32644.1};
InterProI2WPG9 
PFAMI2WPG9 
ProdomI2WPG9 
UniProtKBD8ALL0SubName: Full=ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFK15969.1};
InterProD8ALL0 
PFAMD8ALL0 
ProdomD8ALL0 
UniProtKBL3VHV3SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3VHV3 
PFAML3VHV3 
ProdomL3VHV3 
UniProtKBE2WUD3SubName: Full=Bacterial extracellular solute-binding family protein;
InterProE2WUD3 
PFAME2WUD3 
ProdomE2WUD3 
UniProtKBD6I920SubName: Full=ABC transporter {ECO:0000313|EMBL:EFF07808.2};
InterProD6I920 
PFAMD6I920 
ProdomD6I920 
UniProtKBA0A0E2TW42SubName: Full=Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EZE17909.1};
InterProA0A0E2TW42 
PFAMA0A0E2TW42 
ProdomA0A0E2TW42 
UniProtKBC9QW25SubName: Full=Extracellular solute-binding protein family 1;SubName: Full=Putative spermidine/putrescine transporter subunit;Flags: Precursor;
InterProC9QW25 
PFAMC9QW25 
ProdomC9QW25 
UniProtKBA0A0E3KF60SubName: Full=Putative ABC transporter periplasmic-binding protein YdcS {ECO:0000313|EMBL:AKA90480.1};
InterProA0A0E3KF60 
PFAMA0A0E3KF60 
ProdomA0A0E3KF60 
UniProtKBB3I223SubName: Full=ABC transporter, periplasmic substrate-binding protein;
InterProB3I223 
PFAMB3I223 
ProdomB3I223 
UniProtKBK3ISM4SubName: Full=Putative ABC transporter periplasmic-binding protein YdcS;
InterProK3ISM4 
PFAMK3ISM4 
ProdomK3ISM4 
UniProtKBE9WEF8SubName: Full=Bacterial extracellular solute-binding protein;
InterProE9WEF8 
PFAME9WEF8 
ProdomE9WEF8 
UniProtKBA0A0G3HHN0SubName: Full=Polyhydroxybutyrate (PHB) synthase, ABC transporter periplasmic binding protein-like protein {ECO:0000313|EMBL:AKK12836.1};
InterProA0A0G3HHN0 
PFAMA0A0G3HHN0 
ProdomA0A0G3HHN0 
UniProtKBH5LL51SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5LL51 
PFAMH5LL51 
ProdomH5LL51 
UniProtKBI4JAD2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86191.1};
InterProI4JAD2 
PFAMI4JAD2 
ProdomI4JAD2 
UniProtKBI6GR60SubName: Full=Bacterial extracellular solute-binding family protein;
InterProI6GR60 
PFAMI6GR60 
ProdomI6GR60 
UniProtKBL3KRS5SubName: Full=Spermidine/putrescine transporter subunit {ECO:0000313|EMBL:ELE01122.1};
InterProL3KRS5 
PFAML3KRS5 
ProdomL3KRS5 
UniProtKBL3LJ77SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3LJ77 
PFAML3LJ77 
ProdomL3LJ77 
UniProtKBI2ZWK8SubName: Full=ABC transporter, solute-binding protein;
InterProI2ZWK8 
PFAMI2ZWK8 
ProdomI2ZWK8 
UniProtKBI2X4Z6SubName: Full=ABC transporter, solute-binding protein {ECO:0000313|EMBL:EII44066.1};
InterProI2X4Z6 
PFAMI2X4Z6 
ProdomI2X4Z6 
UniProtKBI4NM65SubName: Full=Spermidine/putrescine transporter subunit;
InterProI4NM65 
PFAMI4NM65 
ProdomI4NM65 
UniProtKBC5W3M8SubName: Full=Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACT29231.1};
InterProC5W3M8 
PFAMC5W3M8 
ProdomC5W3M8 
UniProtKBI4UHD3SubName: Full=Putative spermidine/putrescine transporter subunit;
InterProI4UHD3 
PFAMI4UHD3 
ProdomI4UHD3 
UniProtKBC6UH66SubName: Full=Predicted spermidine/putrescine transporter subunit;
InterProC6UH66 
PFAMC6UH66 
ProdomC6UH66 
UniProtKBC8U8B6SubName: Full=Predicted spermidine/putrescine transporter subunit {ECO:0000313|EMBL:BAI30394.1};
InterProC8U8B6 
PFAMC8U8B6 
ProdomC8U8B6 
UniProtKBK3JRW5SubName: Full=Putative ABC transporter periplasmic-binding protein YdcS;
InterProK3JRW5 
PFAMK3JRW5 
ProdomK3JRW5 
UniProtKBL2V2L4SubName: Full=Spermidine/putrescine transporter subunit {ECO:0000313|EMBL:ELC09508.1};
InterProL2V2L4 
PFAML2V2L4 
ProdomL2V2L4 
UniProtKBD8B7Q2SubName: Full=ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFJ64885.1};
InterProD8B7Q2 
PFAMD8B7Q2 
ProdomD8B7Q2 
UniProtKBH5H6N1SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5H6N1 
PFAMH5H6N1 
ProdomH5H6N1 
UniProtKBI2R3I9SubName: Full=Putative ABC transporter periplasmic-binding protein ydcS;
InterProI2R3I9 
PFAMI2R3I9 
ProdomI2R3I9 
UniProtKBI2P7U7SubName: Full=Uncharacterized protein;
InterProI2P7U7 
PFAMI2P7U7 
ProdomI2P7U7 
UniProtKBE7HNW3SubName: Full=Bacterial extracellular solute-binding family protein;
InterProE7HNW3 
PFAME7HNW3 
ProdomE7HNW3 
UniProtKBE9WSN6SubName: Full=Extracellular solute-binding protein;
InterProE9WSN6 
PFAME9WSN6 
ProdomE9WSN6 
UniProtKBL3ZYJ3SubName: Full=Spermidine/putrescine transporter subunit;
InterProL3ZYJ3 
PFAML3ZYJ3 
ProdomL3ZYJ3 
UniProtKBG0FFB3SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:AEJ56487.1};
InterProG0FFB3 
PFAMG0FFB3 
ProdomG0FFB3 
UniProtKBG2F6U6SubName: Full=Putative spermidine/putrescine transporter subunit;
InterProG2F6U6 
PFAMG2F6U6 
ProdomG2F6U6 
UniProtKBH4VVQ3SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH4VVQ3 
PFAMH4VVQ3 
ProdomH4VVQ3 
UniProtKBH4W9P0SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH4W9P0 
PFAMH4W9P0 
ProdomH4W9P0 
UniProtKBH5II94SubName: Full=Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EHX33168.1};
InterProH5II94 
PFAMH5II94 
ProdomH5II94 
UniProtKBH5KCU9SubName: Full=Bacterial extracellular solute-binding family protein;
InterProH5KCU9 
PFAMH5KCU9 
ProdomH5KCU9 
UniProtKBE1HLR2SubName: Full=ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFK91141.1};
InterProE1HLR2 
PFAME1HLR2 
ProdomE1HLR2