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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76168.2
Original Database ID UP P76168
Organism Escherichia coli, Escherichia coli K-12
Annotation intq_ecoli recname: full=putative
lambdoid prophage qin defective
integrase
Sequence Length 385

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region4-350
Protein Length385
Template PDB Code1z1bA
Template Region42-343
Sequence Identity17%
E-Value0
GA3411
MPQS0.911399
z-DOPE0.49
TSVMod MethodMSALL
TSVMod RMSD7.811
TSVMod NO350.447
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1z1bcrystal structure of a lambda integrase dimer bound to a coc' core site
DBALI1z1bA 
CATH3.30.160.60 Domain: 1z1bA01 Classic Zinc Finger (40%)
CATH1.10.150.130 Domain: 1z1bA02 DNA polymerase; domain 1 (100%)
CATH1.10.443.10 Domain: 1z1bA03 Intergrase catalytic core (93%)
JenaImageLibrary1z1b 
Target Sequence
UniProtKBP76168RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProP76168 
PFAMP76168 
ProdomP76168 
UniProtKBQ2MB81RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProQ2MB81 
PFAMQ2MB81 
ProdomQ2MB81 
UniProtKBP76168RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProP76168 
PFAMP76168 
ProdomP76168 
UniProtKBP76168.2INTQ_ECOLI RecName: Full=Putative lambdoid prophage Qin defective integrase
InterProP76168.2 
PFAMP76168.2 
ProdomP76168.2 
UniProtKBQ2MB81RecName: Full=Putative lambdoid prophage Qin defective integrase;Flags: Fragment;
InterProQ2MB81 
PFAMQ2MB81 
ProdomQ2MB81 
GenPept
GenPept9910723INTQ_ECOLI RecName: Full=Putative lambdoid prophage Qin defective integrase