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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P76176
Original Database ID ref NP_416115.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=uncharacterized
serine protease ydgd;ec=3.4.21.-;flags:
precursor;
Sequence Length 273

Dataset Information:

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Model Information

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Target Region19-273
Protein Length273
Template PDB Code3k65B
Template Region303-576
Sequence Identity18%
E-Value0.000023
GA3410.58
MPQS1.08927
z-DOPE0.41
TSVMod MethodMSALL
TSVMod RMSD10.434
TSVMod NO350.376
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3k65
DBALI3k65B 
JenaImageLibrary3k65 
Target Sequence
UniProtKBG2EY95SubName: Full=Putative exported metallopeptidase;
InterProG2EY95 
PFAMG2EY95 
ProdomG2EY95 
UniProtKBA0A071DTS5SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDZ39960.1};
InterProA0A071DTS5 
PFAMA0A071DTS5 
ProdomA0A071DTS5 
UniProtKBA0A073GUE7SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KEJ68615.1};
InterProA0A073GUE7 
PFAMA0A073GUE7 
ProdomA0A073GUE7 
UniProtKBA0A079F9M0SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDY52790.1};
InterProA0A079F9M0 
PFAMA0A079F9M0 
ProdomA0A079F9M0 
UniProtKBA0A079FQ97SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDY62392.1};
InterProA0A079FQ97 
PFAMA0A079FQ97 
ProdomA0A079FQ97 
UniProtKBA0A080GMV3SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KEN90800.1};
InterProA0A080GMV3 
PFAMA0A080GMV3 
ProdomA0A080GMV3 
UniProtKBA0A080I6P6SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KEO24247.1};
InterProA0A080I6P6 
PFAMA0A080I6P6 
ProdomA0A080I6P6 
UniProtKBA0A0G3HWL6SubName: Full=Putative peptidase protein {ECO:0000313|EMBL:AKK17686.1};
InterProA0A0G3HWL6 
PFAMA0A0G3HWL6 
ProdomA0A0G3HWL6 
UniProtKBK3I244SubName: Full=Putative protease YdgD;
InterProK3I244 
PFAMK3I244 
ProdomK3I244 
UniProtKBI4TDT6SubName: Full=Putative exported metallopeptidase;
InterProI4TDT6 
PFAMI4TDT6 
ProdomI4TDT6 
UniProtKBL2Z9W7SubName: Full=Protease YdgD;
InterProL2Z9W7 
PFAML2Z9W7 
ProdomL2Z9W7 
UniProtKBA0A071C9A3SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDY88030.1};
InterProA0A071C9A3 
PFAMA0A071C9A3 
ProdomA0A071C9A3 
UniProtKBA0A071ANY2SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDY64667.1};
InterProA0A071ANY2 
PFAMA0A071ANY2 
ProdomA0A071ANY2 
UniProtKBL3EYL1SubName: Full=Protease YdgD;
InterProL3EYL1 
PFAML3EYL1 
ProdomL3EYL1 
UniProtKBN2FTM8SubName: Full=Trypsin family protein;
InterProN2FTM8 
PFAMN2FTM8 
ProdomN2FTM8 
UniProtKBN2PTK6SubName: Full=Trypsin family protein;
InterProN2PTK6 
PFAMN2PTK6 
ProdomN2PTK6 
UniProtKBH4UJ87SubName: Full=Trypsin family protein {ECO:0000313|EMBL:EHV59637.1};
InterProH4UJ87 
PFAMH4UJ87 
ProdomH4UJ87 
UniProtKBH4VXQ8SubName: Full=Trypsin family protein;
InterProH4VXQ8 
PFAMH4VXQ8 
ProdomH4VXQ8 
UniProtKBN2KSD1SubName: Full=Trypsin family protein;
InterProN2KSD1 
PFAMN2KSD1 
ProdomN2KSD1 
UniProtKBN2RI28SubName: Full=Trypsin family protein;
InterProN2RI28 
PFAMN2RI28 
ProdomN2RI28 
UniProtKBI0ZTF3SubName: Full=Trypsin;
InterProI0ZTF3 
PFAMI0ZTF3 
ProdomI0ZTF3 
UniProtKBN2S1T1SubName: Full=Trypsin family protein {ECO:0000313|EMBL:ENB28371.1};
InterProN2S1T1 
PFAMN2S1T1 
ProdomN2S1T1 
UniProtKBI2P7H2SubName: Full=Uncharacterized protein;
InterProI2P7H2 
PFAMI2P7H2 
ProdomI2P7H2 
UniProtKBI2R1Q4SubName: Full=Uncharacterized protein;
InterProI2R1Q4 
PFAMI2R1Q4 
ProdomI2R1Q4 
UniProtKBI4JAI1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86240.1};
InterProI4JAI1 
PFAMI4JAI1 
ProdomI4JAI1 
UniProtKBI2ZT34SubName: Full=Trypsin;
InterProI2ZT34 
PFAMI2ZT34 
ProdomI2ZT34 
UniProtKBE1HT41SubName: Full=Trypsin {ECO:0000313|EMBL:EFK88938.1};
InterProE1HT41 
PFAME1HT41 
ProdomE1HT41 
UniProtKBM8TAT9SubName: Full=Trypsin family protein {ECO:0000313|EMBL:EMV60677.1};
InterProM8TAT9 
PFAMM8TAT9 
ProdomM8TAT9 
UniProtKBE6AZT3SubName: Full=Trypsin family protein {ECO:0000313|EMBL:EFU99634.1};EC=3.4.21.- {ECO:0000313|EMBL:EFU99634.1};
InterProE6AZT3 
PFAME6AZT3 
ProdomE6AZT3 
UniProtKBI2YMA2SubName: Full=Trypsin;
InterProI2YMA2 
PFAMI2YMA2 
ProdomI2YMA2 
UniProtKBE9WEU8SubName: Full=Putative uncharacterized protein;
InterProE9WEU8 
PFAME9WEU8 
ProdomE9WEU8 
UniProtKBF4SJJ8SubName: Full=Putative protease YdgD {ECO:0000313|EMBL:EGI11200.1};
InterProF4SJJ8 
PFAMF4SJJ8 
ProdomF4SJJ8 
UniProtKBN2F834SubName: Full=Trypsin family protein;
InterProN2F834 
PFAMN2F834 
ProdomN2F834 
UniProtKBN2E1C9SubName: Full=Trypsin family protein;
InterProN2E1C9 
PFAMN2E1C9 
ProdomN2E1C9 
UniProtKBG0F1M4SubName: Full=Trypsin family protein {ECO:0000313|EMBL:AEJ56620.1};
InterProG0F1M4 
PFAMG0F1M4 
ProdomG0F1M4 
UniProtKBN2I3W6SubName: Full=Trypsin family protein;
InterProN2I3W6 
PFAMN2I3W6 
ProdomN2I3W6 
UniProtKBM8U224SubName: Full=Trypsin family protein;
InterProM8U224 
PFAMM8U224 
ProdomM8U224 
UniProtKBM8YXJ7SubName: Full=Trypsin family protein;
InterProM8YXJ7 
PFAMM8YXJ7 
ProdomM8YXJ7 
UniProtKBD8AU90SubName: Full=Trypsin {ECO:0000313|EMBL:EFK13310.1};
InterProD8AU90 
PFAMD8AU90 
ProdomD8AU90 
UniProtKBI2XD88SubName: Full=Trypsin {ECO:0000313|EMBL:EII46958.1};
InterProI2XD88 
PFAMI2XD88 
ProdomI2XD88 
UniProtKBL3UKD8SubName: Full=Protease YdgD;
InterProL3UKD8 
PFAML3UKD8 
ProdomL3UKD8 
UniProtKBL3QXS1SubName: Full=Protease YdgD;
InterProL3QXS1 
PFAML3QXS1 
ProdomL3QXS1 
UniProtKBL4P0N5SubName: Full=Protease YdgD;
InterProL4P0N5 
PFAML4P0N5 
ProdomL4P0N5 
UniProtKBL3ZWQ4SubName: Full=Protease YdgD;
InterProL3ZWQ4 
PFAML3ZWQ4 
ProdomL3ZWQ4 
UniProtKBI2YC16SubName: Full=Trypsin;
InterProI2YC16 
PFAMI2YC16 
ProdomI2YC16 
UniProtKBL5GB61SubName: Full=Protease YdgD;
InterProL5GB61 
PFAML5GB61 
ProdomL5GB61 
UniProtKBB1XF63SubName: Full=Predicted peptidase;
InterProB1XF63 
PFAMB1XF63 
ProdomB1XF63 
UniProtKBB2N103SubName: Full=Peptidase, S1A (Chymotrypsin) family;
InterProB2N103 
PFAMB2N103 
ProdomB2N103 
UniProtKBM2NUB0SubName: Full=Uncharacterized protein;
InterProM2NUB0 
PFAMM2NUB0 
ProdomM2NUB0 
UniProtKBG2B9J4SubName: Full=Trypsin family protein;EC=3.4.21.-;
InterProG2B9J4 
PFAMG2B9J4 
ProdomG2B9J4 
UniProtKBN2GS81SubName: Full=Trypsin family protein;
InterProN2GS81 
PFAMN2GS81 
ProdomN2GS81 
UniProtKBA0A029KUZ5SubName: Full=Trypsin family protein {ECO:0000313|EMBL:EZJ76661.1};
InterProA0A029KUZ5 
PFAMA0A029KUZ5 
ProdomA0A029KUZ5 
UniProtKBH4VG51SubName: Full=Trypsin family protein;
InterProH4VG51 
PFAMH4VG51 
ProdomH4VG51 
UniProtKBA0A070T5G7SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDX21253.1};
InterProA0A070T5G7 
PFAMA0A070T5G7 
ProdomA0A070T5G7 
UniProtKBA0A073TFC1SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KEL26866.1};
InterProA0A073TFC1 
PFAMA0A073TFC1 
ProdomA0A073TFC1 
UniProtKBA0A0E1SX92SubName: Full=Peptidase, S1A (Chymotrypsin) family {ECO:0000313|EMBL:EDU63729.1};
InterProA0A0E1SX92 
PFAMA0A0E1SX92 
ProdomA0A0E1SX92 
UniProtKBL2V0A2SubName: Full=Protease YdgD {ECO:0000313|EMBL:ELC08951.1};
InterProL2V0A2 
PFAML2V0A2 
ProdomL2V0A2 
UniProtKBL3WWZ5SubName: Full=Protease YdgD;
InterProL3WWZ5 
PFAML3WWZ5 
ProdomL3WWZ5 
UniProtKBL8BZZ2SubName: Full=Putative protease ydgD;
InterProL8BZZ2 
PFAML8BZZ2 
ProdomL8BZZ2 
UniProtKBM8SFT8SubName: Full=Trypsin family protein;
InterProM8SFT8 
PFAMM8SFT8 
ProdomM8SFT8 
UniProtKBM8ZTC9SubName: Full=Trypsin family protein;
InterProM8ZTC9 
PFAMM8ZTC9 
ProdomM8ZTC9 
UniProtKBF4M9Y9SubName: Full=Putative uncharacterized protein;
InterProF4M9Y9 
PFAMF4M9Y9 
ProdomF4M9Y9 
UniProtKBG2CK58SubName: Full=Trypsin family protein;EC=3.4.21.-;
InterProG2CK58 
PFAMG2CK58 
ProdomG2CK58 
UniProtKBM9GCE1SubName: Full=Trypsin family protein {ECO:0000313|EMBL:EMX30289.1};
InterProM9GCE1 
PFAMM9GCE1 
ProdomM9GCE1 
UniProtKBA0A029MSS2SubName: Full=Trypsin family protein {ECO:0000313|EMBL:EZK00625.1};
InterProA0A029MSS2 
PFAMA0A029MSS2 
ProdomA0A029MSS2 
UniProtKBM9BG38SubName: Full=Trypsin family protein;
InterProM9BG38 
PFAMM9BG38 
ProdomM9BG38 
UniProtKBA0A069XQG1SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDU29760.1};
InterProA0A069XQG1 
PFAMA0A069XQG1 
ProdomA0A069XQG1 
UniProtKBL3RKD8SubName: Full=Protease YdgD;
InterProL3RKD8 
PFAML3RKD8 
ProdomL3RKD8 
UniProtKBE9WXX2SubName: Full=Putative uncharacterized protein;
InterProE9WXX2 
PFAME9WXX2 
ProdomE9WXX2 
UniProtKBN2N343SubName: Full=Trypsin family protein;
InterProN2N343 
PFAMN2N343 
ProdomN2N343 
UniProtKBA0A069Z5C2SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDU54682.1};
InterProA0A069Z5C2 
PFAMA0A069Z5C2 
ProdomA0A069Z5C2 
UniProtKBA0A0E0TZU0SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE56649.1};
InterProA0A0E0TZU0 
PFAMA0A0E0TZU0 
ProdomA0A0E0TZU0 
UniProtKBL3VV40SubName: Full=Protease YdgD;
InterProL3VV40 
PFAML3VV40 
ProdomL3VV40 
UniProtKBC4ZY61SubName: Full=Predicted peptidase;
InterProC4ZY61 
PFAMC4ZY61 
ProdomC4ZY61 
UniProtKBM9GI44SubName: Full=Trypsin family protein;
InterProM9GI44 
PFAMM9GI44 
ProdomM9GI44 
UniProtKBN2ID16SubName: Full=Trypsin family protein;
InterProN2ID16 
PFAMN2ID16 
ProdomN2ID16 
UniProtKBH0QCZ9SubName: Full=Predicted peptidase;
InterProH0QCZ9 
PFAMH0QCZ9 
ProdomH0QCZ9 
UniProtKBL3VGA6SubName: Full=Protease YdgD;
InterProL3VGA6 
PFAML3VGA6 
ProdomL3VGA6 
UniProtKBL4WJH8SubName: Full=Protease YdgD;
InterProL4WJH8 
PFAML4WJH8 
ProdomL4WJH8 
UniProtKBB1IQZ2SubName: Full=Peptidase S1 and S6 chymotrypsin/Hap;Flags: Precursor;
InterProB1IQZ2 
PFAMB1IQZ2 
ProdomB1IQZ2 
UniProtKBM7VHB2SubName: Full=Putative exported metallopeptidase;
InterProM7VHB2 
PFAMM7VHB2 
ProdomM7VHB2 
UniProtKBC9QUY8SubName: Full=Peptidase S1 and S6 chymotrypsin/Hap;SubName: Full=Putative peptidase;Flags: Precursor;
InterProC9QUY8 
PFAMC9QUY8 
ProdomC9QUY8 
UniProtKBD8B9Y0SubName: Full=Trypsin {ECO:0000313|EMBL:EFJ64135.1};
InterProD8B9Y0 
PFAMD8B9Y0 
ProdomD8B9Y0 
UniProtKBE3PMH3SubName: Full=Putative protease {ECO:0000313|EMBL:CBJ01135.1};
InterProE3PMH3 
PFAME3PMH3 
ProdomE3PMH3 
UniProtKBL3KPS0SubName: Full=Protease YdgD {ECO:0000313|EMBL:ELE00918.1};
InterProL3KPS0 
PFAML3KPS0 
ProdomL3KPS0 
UniProtKBM9CPG1SubName: Full=Trypsin family protein;
InterProM9CPG1 
PFAMM9CPG1 
ProdomM9CPG1 
UniProtKBF9R5F1SubName: Full=Putative exported metallopeptidase;
InterProF9R5F1 
PFAMF9R5F1 
ProdomF9R5F1 
UniProtKBL3TR29SubName: Full=Protease YdgD;
InterProL3TR29 
PFAML3TR29 
ProdomL3TR29 
UniProtKBK5H252SubName: Full=Putative protease YdgD;
InterProK5H252 
PFAMK5H252 
ProdomK5H252 
UniProtKBK3JID0SubName: Full=Putative protease YdgD;
InterProK3JID0 
PFAMK3JID0 
ProdomK3JID0 
UniProtKBN2QRS7SubName: Full=Trypsin family protein {ECO:0000313|EMBL:ENB13529.1};
InterProN2QRS7 
PFAMN2QRS7 
ProdomN2QRS7 
UniProtKBH4WB24SubName: Full=Trypsin family protein;
InterProH4WB24 
PFAMH4WB24 
ProdomH4WB24 
UniProtKBI2I8I5SubName: Full=Putative peptidase;
InterProI2I8I5 
PFAMI2I8I5 
ProdomI2I8I5 
UniProtKBN2IXQ4SubName: Full=Trypsin family protein {ECO:0000313|EMBL:ENA32222.1};
InterProN2IXQ4 
PFAMN2IXQ4 
ProdomN2IXQ4 
UniProtKBA0A070XYR3SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDX84422.1};
InterProA0A070XYR3 
PFAMA0A070XYR3 
ProdomA0A070XYR3 
UniProtKBA0A071CEH9SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDZ17226.1};
InterProA0A071CEH9 
PFAMA0A071CEH9 
ProdomA0A071CEH9 
UniProtKBA0A074HWJ1SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KEN98917.1};
InterProA0A074HWJ1 
PFAMA0A074HWJ1 
ProdomA0A074HWJ1 
UniProtKBA0A079GS48SubName: Full=Trypsin family protein {ECO:0000313|EMBL:KDY93782.1};
InterProA0A079GS48 
PFAMA0A079GS48 
ProdomA0A079GS48 
UniProtKBA0A0E3KFA2SubName: Full=Putative serine protease YdgD {ECO:0000313|EMBL:AKA90618.1};
InterProA0A0E3KFA2 
PFAMA0A0E3KFA2 
ProdomA0A0E3KFA2 
UniProtKBG2AUV7SubName: Full=Trypsin family protein;EC=3.4.21.-;
InterProG2AUV7 
PFAMG2AUV7 
ProdomG2AUV7