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Sequence Information

Primary Database Link P76241.1
Original Database ID ref NP_416304.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation yeam_ecoli recname: full=uncharacterized
hth-type transcriptional regulator
yeam
Sequence Length 273

Dataset Information:

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Model Information

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Target Region158-258
Protein Length273
Template PDB Code3mklA
Template Region141-242
Sequence Identity32%
E-Value0.00075
GA3411
MPQS0.869063
z-DOPE-1.34
TSVMod MethodMSALL
TSVMod RMSD2.343
TSVMod NO350.897
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3mklcrystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12
DBALI3mklA 
JenaImageLibrary3mkl 
Target Sequence
UniProtKBC4ZZE6SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZZE6 
PFAMC4ZZE6 
ProdomC4ZZE6 
UniProtKBF4SKL4SubName: Full=Putative ARAC-type regulatory protein {ECO:0000313|EMBL:EGI11414.1};
InterProF4SKL4 
PFAMF4SKL4 
ProdomF4SKL4 
UniProtKBI2I926SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI2I926 
PFAMI2I926 
ProdomI2I926 
UniProtKBA0A037YCN9SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:AJB51909.1};SubName: Full=Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:CEE07049.1};
InterProA0A037YCN9 
PFAMA0A037YCN9 
ProdomA0A037YCN9 
UniProtKBI0ZSV4SubName: Full=Transcriptional regulator, AraC family;
InterProI0ZSV4 
PFAMI0ZSV4 
ProdomI0ZSV4 
UniProtKBM2NU25SubName: Full=DNA-binding transcriptional regulator;
InterProM2NU25 
PFAMM2NU25 
ProdomM2NU25 
UniProtKBE6NY77SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProE6NY77 
PFAME6NY77 
ProdomE6NY77 
UniProtKBE1HI33SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK92426.1};
InterProE1HI33 
PFAME1HI33 
ProdomE1HI33 
UniProtKBD8BTR1SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFI89950.1};
InterProD8BTR1 
PFAMD8BTR1 
ProdomD8BTR1 
UniProtKBH4V1F6SubName: Full=Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EHV58107.1};
InterProH4V1F6 
PFAMH4V1F6 
ProdomH4V1F6 
UniProtKBH4VGR4SubName: Full=Bacterial regulatory helix-turn-helix s, AraC family protein;
InterProH4VGR4 
PFAMH4VGR4 
ProdomH4VGR4 
UniProtKBQ2MB28RecName: Full=Uncharacterized HTH-type transcriptional regulator YeaM;
InterProQ2MB28 
PFAMQ2MB28 
ProdomQ2MB28 
UniProtKBW1BM10SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDK81666.1};
InterProW1BM10 
PFAMW1BM10 
ProdomW1BM10 
UniProtKBD8B8Y6SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFJ64447.1};
InterProD8B8Y6 
PFAMD8B8Y6 
ProdomD8B8Y6 
UniProtKBB1XGQ0SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XGQ0 
PFAMB1XGQ0 
ProdomB1XGQ0 
UniProtKBD8AV56SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK13004.1};
InterProD8AV56 
PFAMD8AV56 
ProdomD8AV56 
UniProtKBA0A0E1LY83SubName: Full=Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:AJF56685.1};
InterProA0A0E1LY83 
PFAMA0A0E1LY83 
ProdomA0A0E1LY83 
UniProtKBW0FSN8SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:AHF26564.1};
InterProW0FSN8 
PFAMW0FSN8 
ProdomW0FSN8 
UniProtKBA0A0E3H351SubName: Full=Putative HTH-type transcriptional regulator YeaM {ECO:0000313|EMBL:AKA90806.1};
InterProA0A0E3H351 
PFAMA0A0E3H351 
ProdomA0A0E3H351 
UniProtKBP76241RecName: Full=Uncharacterized HTH-type transcriptional regulator YeaM;
InterProP76241 
PFAMP76241 
ProdomP76241 
UniProtKBH4UK02SubName: Full=Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EHV59902.1};
InterProH4UK02 
PFAMH4UK02 
ProdomH4UK02 
UniProtKBG2EXP1SubName: Full=Putative DNA-binding transcriptional regulator;
InterProG2EXP1 
PFAMG2EXP1 
ProdomG2EXP1 
UniProtKBH0Q8K0SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0Q8K0 
PFAMH0Q8K0 
ProdomH0Q8K0 
UniProtKBV1A2Z3SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ESD98775.1};
InterProV1A2Z3 
PFAMV1A2Z3 
ProdomV1A2Z3 
UniProtKBI4TBX1SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI4TBX1 
PFAMI4TBX1 
ProdomI4TBX1 
UniProtKBF9QV56SubName: Full=Putative DNA-binding transcriptional regulator;
InterProF9QV56 
PFAMF9QV56 
ProdomF9QV56 
UniProtKBG2AVQ8SubName: Full=Transcriptional regulator, AraC family;
InterProG2AVQ8 
PFAMG2AVQ8 
ProdomG2AVQ8 
UniProtKBC4ZZE6SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZZE6 
PFAMC4ZZE6 
ProdomC4ZZE6 
UniProtKBA0A8A5HQT0SubName: Full=DNA-binding transcriptional regulator NimR {ECO:0000313|EMBL:QTF32853.1}
InterProA0A8A5HQT0 
PFAMA0A8A5HQT0 
ProdomA0A8A5HQT0 
UniProtKBA0A8A5HFS9SubName: Full=DNA-binding transcriptional regulator NimR {ECO:0000313|EMBL:QTF28260.1}
InterProA0A8A5HFS9 
PFAMA0A8A5HFS9 
ProdomA0A8A5HFS9 
UniProtKBA0A1X3JH38SubName: Full=Putative ARAC-type regulatory protein {ECO:0000313|EMBL:OSL08632.1}
InterProA0A1X3JH38 
PFAMA0A1X3JH38 
ProdomA0A1X3JH38 
UniProtKBB1XGQ0SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XGQ0 
PFAMB1XGQ0 
ProdomB1XGQ0 
UniProtKBA0A238BB97SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:KPO06602.1}SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:KAE9927055.1}SubName: Full=Helix-turn-helix
InterProA0A238BB97 
PFAMA0A238BB97 
ProdomA0A238BB97 
UniProtKBH4VGR4SubName: Full=Bacterial regulatory helix-turn-helix s, AraC family protein;
InterProH4VGR4 
PFAMH4VGR4 
ProdomH4VGR4 
UniProtKBA0A7Z8FC63SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:TFB36574.1}
InterProA0A7Z8FC63 
PFAMA0A7Z8FC63 
ProdomA0A7Z8FC63 
UniProtKBA0A8F8H167SubName: Full=DNA-binding transcriptional regulator NimR {ECO:0000313|EMBL:QXZ38713.1}
InterProA0A8F8H167 
PFAMA0A8F8H167 
ProdomA0A8F8H167 
UniProtKBA0A8F9MQI6SubName: Full=DNA-binding transcriptional regulator NimR {ECO:0000313|EMBL:QYE27494.1}
InterProA0A8F9MQI6 
PFAMA0A8F9MQI6 
ProdomA0A8F9MQI6 
UniProtKBA0A7D4RNB0SubName: Full=Helix-turn-helix transcriptional regulator {ECO:0000313|EMBL:QKI52747.1}
InterProA0A7D4RNB0 
PFAMA0A7D4RNB0 
ProdomA0A7D4RNB0 
UniProtKBA0A8F9I409SubName: Full=DNA-binding transcriptional regulator NimR {ECO:0000313|EMBL:QYE41405.1}
InterProA0A8F9I409 
PFAMA0A8F9I409 
ProdomA0A8F9I409 
UniProtKBA0A854NP17SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:OWR12523.1}
InterProA0A854NP17 
PFAMA0A854NP17 
ProdomA0A854NP17 
UniProtKBA0A5Q3TAF7SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:QGL41156.1}
InterProA0A5Q3TAF7 
PFAMA0A5Q3TAF7 
ProdomA0A5Q3TAF7 
UniProtKBA0A8E2P3F8SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:PAY97520.1}
InterProA0A8E2P3F8 
PFAMA0A8E2P3F8 
ProdomA0A8E2P3F8 
UniProtKBH4UK02SubName: Full=Bacterial regulatory helix-turn-helix s, AraC family protein;
InterProH4UK02 
PFAMH4UK02 
ProdomH4UK02 
UniProtKBI4TBX1SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI4TBX1 
PFAMI4TBX1 
ProdomI4TBX1 
UniProtKBH0Q8K0SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0Q8K0 
PFAMH0Q8K0 
ProdomH0Q8K0 
UniProtKBG2EXP1SubName: Full=Putative DNA-binding transcriptional regulator;
InterProG2EXP1 
PFAMG2EXP1 
ProdomG2EXP1 
UniProtKBF4SKL4SubName: Full=Putative ARAC-type regulatory protein;
InterProF4SKL4 
PFAMF4SKL4 
ProdomF4SKL4 
UniProtKBG2AVQ8SubName: Full=Transcriptional regulator, AraC family;
InterProG2AVQ8 
PFAMG2AVQ8 
ProdomG2AVQ8 
UniProtKBF9QV56SubName: Full=Putative DNA-binding transcriptional regulator;
InterProF9QV56 
PFAMF9QV56 
ProdomF9QV56 
UniProtKBI2I926SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI2I926 
PFAMI2I926 
ProdomI2I926 
UniProtKBI0ZSV4SubName: Full=Transcriptional regulator, AraC family;
InterProI0ZSV4 
PFAMI0ZSV4 
ProdomI0ZSV4 
UniProtKBE1HI33SubName: Full=Transcriptional regulator, AraC family;
InterProE1HI33 
PFAME1HI33 
ProdomE1HI33 
UniProtKBD8AV56SubName: Full=Transcriptional regulator, AraC family;
InterProD8AV56 
PFAMD8AV56 
ProdomD8AV56 
UniProtKBQ2MB28Predicted DNA-binding transcriptional regulator
InterProQ2MB28 
PFAMQ2MB28 
ProdomQ2MB28 
UniProtKBH4V1F6SubName: Full=Bacterial regulatory helix-turn-helix s, AraC family protein;
InterProH4V1F6 
PFAMH4V1F6 
ProdomH4V1F6 
UniProtKBE6NY77SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProE6NY77 
PFAME6NY77 
ProdomE6NY77 
UniProtKBD8B8Y6SubName: Full=Transcriptional regulator, AraC family;
InterProD8B8Y6 
PFAMD8B8Y6 
ProdomD8B8Y6 
UniProtKBD8BTR1SubName: Full=Transcriptional regulator, AraC family;
InterProD8BTR1 
PFAMD8BTR1 
ProdomD8BTR1 
UniProtKBQ2MB28RecName: Full=HTH-type transcriptional regulator NimR {ECO:0000305};AltName: Full=Regulator of nimT {ECO:0000303|PubMed:25790494};
InterProQ2MB28 
PFAMQ2MB28 
ProdomQ2MB28 
UniProtKBP76241.1YEAM_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator yeaM
InterProP76241.1 
PFAMP76241.1 
ProdomP76241.1 
UniProtKBP76241RecName: Full=HTH-type transcriptional regulator NimR {ECO:0000305};AltName: Full=Regulator of nimT {ECO:0000303|PubMed:25790494};
InterProP76241 
PFAMP76241 
ProdomP76241 
RefSeqAP_002409.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
RefSeqZP_07244046.1 transcriptional regulator, AraC family [Escherichia coli MS 146-1]
RefSeqNP_416304.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
RefSeqZP_05436411.1 putative DNA-binding transcriptional regulator [Escherichia sp. 4_1_40B]
RefSeqYP_001730766.1 DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]
RefSeqYP_002926800.1 putative DNA-binding transcriptional regulator [Escherichia coli BW2952]
RefSeqZP_07170808.1 transcriptional regulator, AraC family [Escherichia coli MS 175-1]
RefSeqZP_07497807.1 putative DNA-binding transcriptional regulator [Escherichia coli H736]
RefSeqZP_07165236.1 transcriptional regulator, AraC family [Escherichia coli MS 116-1]
RefSeqZP_07184978.1 transcriptional regulator, AraC family [Escherichia coli MS 196-1]
GenPept301020924 transcriptional regulator, AraC family [Escherichia coli MS 196-1]
GenPept571052958transcriptional regulator, AraC family
GenPept682119301putative DNA-binding transcriptional regulator
GenPept899731541AraC family transcriptional regulator
GenPept238862272predicted DNA-binding transcriptional regulator
GenPept238901004 putative DNA-binding transcriptional regulator [Escherichia coli BW2952]
GenPept256022546 putative DNA-binding transcriptional regulator [Escherichia sp. 4_1_40B]
GenPept300449384 transcriptional regulator, AraC family [Escherichia coli MS 116-1]
GenPept300951394 transcriptional regulator, AraC family [Escherichia coli MS 116-1]
GenPept300958686 transcriptional regulator, AraC family [Escherichia coli MS 175-1]
GenPept301077620 transcriptional regulator, AraC family [Escherichia coli MS 146-1]
GenPept301644027 transcriptional regulator, AraC family [Escherichia coli MS 146-1]
GenPept687672651predicted DNA-binding transcriptional regulator
GenPept687676944predicted DNA-binding transcriptional regulator
GenPept899727124AraC family transcriptional regulator
GenPept899722769AraC family transcriptional regulator
GenPept89108629 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
GenPept85675122predicted DNA-binding transcriptional regulator
GenPept817591638putative DNA-binding transcriptional regulator
GenPept817587498putative DNA-binding transcriptional regulator
GenPept817583357putative DNA-binding transcriptional regulator
GenPept817579218putative DNA-binding transcriptional regulator
GenPept817575076putative DNA-binding transcriptional regulator
GenPept751380858putative DNA-binding transcriptional regulator
GenPept7466234F64939 hypothetical protein b1790 - Escherichia coli (strain K-12)
GenPept742951240AraC family transcriptional regulator
GenPept732684301AraC family transcriptional regulator
GenPept731470714putative DNA-binding transcriptional regulator
GenPept730582985putative DNA-binding transcriptional regulator