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Sequence Information

Primary Database Link A0A090HPA6
Original Database ID ref NP_416313.4
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation subname: full=hth-type transcriptional
regulator dmlr;subname: full=lysr
family transcriptional regulator
{eco:0000313|embl:ako58848.1};
Sequence Length 307

Dataset Information:

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Model Information

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Target Region7-303
Protein Length307
Template PDB Code3k1mA
Template Region3-299
Sequence Identity25%
E-Value0.00000019
GA3411
MPQS1.15613
z-DOPE0.65
TSVMod MethodMSALL
TSVMod RMSD8.077
TSVMod NO350.508
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3k1m
DBALI3k1mA 
JenaImageLibrary3k1m 
Target Sequence
UniProtKBF9QV66SubName: Full=LysR family transcriptional regulator;
InterProF9QV66 
PFAMF9QV66 
ProdomF9QV66 
UniProtKBG2EXQ0SubName: Full=LysR family transcriptional regulator;
InterProG2EXQ0 
PFAMG2EXQ0 
ProdomG2EXQ0 
UniProtKBC9QTD9SubName: Full=Putative DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, LysR family;
InterProC9QTD9 
PFAMC9QTD9 
ProdomC9QTD9 
UniProtKBA0A0G3HGW3SubName: Full=DNA-binding transcriptional activator for dmlA protein {ECO:0000313|EMBL:AKK12549.1};
InterProA0A0G3HGW3 
PFAMA0A0G3HGW3 
ProdomA0A0G3HGW3 
UniProtKBC4ZZF5SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZZF5 
PFAMC4ZZF5 
ProdomC4ZZF5 
UniProtKBI0ZSU3SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI0ZSU3 
PFAMI0ZSU3 
ProdomI0ZSU3 
UniProtKBM2NU37SubName: Full=LysR family transcriptional regulator;
InterProM2NU37 
PFAMM2NU37 
ProdomM2NU37 
UniProtKBH0Q8K9SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0Q8K9 
PFAMH0Q8K9 
ProdomH0Q8K9 
UniProtKBB1XGQ9SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XGQ9 
PFAMB1XGQ9 
ProdomB1XGQ9 
UniProtKBP76250RecName: Full=HTH-type transcriptional regulator DmlR;AltName: Full=D-malate degradation protein R;
InterProP76250 
PFAMP76250 
ProdomP76250 
UniProtKBA0A090HPA6SubName: Full=HTH-type transcriptional regulator DmlR;SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:AKO58848.1};
InterProA0A090HPA6 
PFAMA0A090HPA6 
ProdomA0A090HPA6 
UniProtKBA0A4V6JW71SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:VTQ21950.1}
InterProA0A4V6JW71 
PFAMA0A4V6JW71 
ProdomA0A4V6JW71 
UniProtKBB1XGQ9SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProB1XGQ9 
PFAMB1XGQ9 
ProdomB1XGQ9 
UniProtKBF9QV66SubName: Full=LysR family transcriptional regulator;
InterProF9QV66 
PFAMF9QV66 
ProdomF9QV66 
UniProtKBC9QTD9SubName: Full=Putative DNA-binding transcriptional regulator;SubName: Full=Transcriptional regulator, LysR family;
InterProC9QTD9 
PFAMC9QTD9 
ProdomC9QTD9 
UniProtKBG2EXQ0SubName: Full=LysR family transcriptional regulator;
InterProG2EXQ0 
PFAMG2EXQ0 
ProdomG2EXQ0 
UniProtKBH0Q8K9SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProH0Q8K9 
PFAMH0Q8K9 
ProdomH0Q8K9 
UniProtKBC4ZZF5SubName: Full=Predicted DNA-binding transcriptional regulator;
InterProC4ZZF5 
PFAMC4ZZF5 
ProdomC4ZZF5 
UniProtKBI0ZSU3SubName: Full=Putative DNA-binding transcriptional regulator;
InterProI0ZSU3 
PFAMI0ZSU3 
ProdomI0ZSU3 
UniProtKBA0A8F8DJ42SubName: Full=DNA-binding transcriptional regulator DmlR {ECO:0000313|EMBL:QXZ38703.1}
InterProA0A8F8DJ42 
PFAMA0A8F8DJ42 
ProdomA0A8F8DJ42 
UniProtKBA0A507X2R6SubName: Full=DNA-binding transcriptional regulator DmlR {ECO:0000313|EMBL:QQQ40020.1}SubName: Full=LysR family transcriptional regulator {ECO:0000313|EMBL:TQD05903.1}
InterProA0A507X2R6 
PFAMA0A507X2R6 
ProdomA0A507X2R6 
UniProtKBP76250RecName: Full=HTH-type transcriptional regulator DmlR;AltName: Full=D-malate degradation protein R;
InterProP76250 
PFAMP76250 
ProdomP76250 
UniProtKBP76250.2YEAT_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator yeaT
InterProP76250.2 
PFAMP76250.2 
ProdomP76250.2 
RefSeqAP_002418.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002926809.1 putative DNA-binding transcriptional regulator [Escherichia coli BW2952]
RefSeqNP_416313.4 DNA-binding transcriptional activator for dmlA [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001730775.1 DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]
GenPept817575087transcriptional activator of dmlA
GenPept899725315LysR family transcriptional regulator
GenPept899729664LysR family transcriptional regulator
GenPept899731551LysR family transcriptional regulator
GenPept90111335 DNA-binding transcriptional activator for dmlA [Escherichia coli str. K-12 substr. MG1655]
GenPept932859733Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme
GenPept3915993YEAT_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator yeaT
GenPept89108638 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. W3110]
GenPept87081978transcriptional activator of dmlA
GenPept732686936LysR family transcriptional regulator
GenPept731470726DNA-binding transcriptional activator for dmlA
GenPept730582997DNA-binding transcriptional activator for dmlA
GenPept687676955DmlR DNA-binding transcriptional regulator
GenPept687672662DmlR DNA-binding transcriptional regulator
GenPept682119312transcriptional activator of dmlA
GenPept664684131LysR family transcriptional regulator
GenPept557272124putative DNA-binding transcriptional regulator
GenPept359332276predicted DNA-binding transcriptional regulator
GenPept315136440putative DNA-binding transcriptional regulator
GenPept260449080transcriptional regulator, LysR family
GenPept238901013 putative DNA-binding transcriptional regulator [Escherichia coli BW2952]
GenPept238862273predicted DNA-binding transcriptional regulator
GenPept1736432ORF_ID:o332#7~similar to
GenPept1736422predicted DNA-binding transcriptional regulator
GenPept170081455 DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]
GenPept802135272DNA-binding transcriptional activator for dmlA
GenPept808702445LysR family transcriptional regulator
GenPept808706814LysR family transcriptional regulator
GenPept827622121DNA-binding transcriptional activator for dmlA protein
GenPept827616566DNA-binding transcriptional activator for dmlA protein
GenPept817591649transcriptional activator of dmlA
GenPept817587509transcriptional activator of dmlA
GenPept817583368transcriptional activator of dmlA
GenPept817579229transcriptional activator of dmlA
GenPept808737082LysR family transcriptional regulator
GenPept808732636LysR family transcriptional regulator
GenPept808724318LysR family transcriptional regulator
GenPept808719956LysR family transcriptional regulator
GenPept808715534LysR family transcriptional regulator
GenPept808711166LysR family transcriptional regulator
GenPept169889290predicted DNA-binding transcriptional regulator
GenBankAAC74869.2 DNA-binding transcriptional activator for dmlA [Escherichia coli str. K-12 substr. MG1655]
GenBankACB02997.1 predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. DH10B]
GenBankACR64271.1 predicted DNA-binding transcriptional regulator [Escherichia coli BW2952]
GenBankACX39502.1 transcriptional regulator, LysR family [Escherichia coli DH1]