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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76323
Original Database ID UP P76323
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation predicted defective phage integrase
(pseudogene)
Sequence Length 92

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region20-67
Protein Length92
Template PDB Code1yxmC
Template Region138-181
Sequence Identity37%
E-Value0.23
GA3410.06
MPQS0.646139
z-DOPE0.72
TSVMod MethodMSALL
TSVMod RMSD10.545
TSVMod NO350.06
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1yxmcrystal structure of peroxisomal trans 2-enoyl coa reductase
DBALI1yxmC 
JenaImageLibrary1yxm 
Target Sequence
UniProtKBP76323RecName: Full=Putative lambdoid prophage defective integrase;
InterProP76323 
PFAMP76323 
ProdomP76323 
UniProtKBA0A0H4IHU6SubName: Full=Integrase {ECO:0000313|EMBL:AKO57480.1};
InterProA0A0H4IHU6 
PFAMA0A0H4IHU6 
ProdomA0A0H4IHU6 
UniProtKBE6NZK8SubName: Full=Predicted defective phage integrase, truncated protein;
InterProE6NZK8 
PFAME6NZK8 
ProdomE6NZK8 
UniProtKBA0A3Z9RG01SubName: Full=Integrase {ECO:0000313|EMBL:EAC1716872.1}
InterProA0A3Z9RG01 
PFAMA0A3Z9RG01 
ProdomA0A3Z9RG01 
UniProtKBP76323Predicted defective phage integrase (Pseudogene)
InterProP76323 
PFAMP76323 
ProdomP76323 
UniProtKBE6NZK8SubName: Full=Predicted defective phage integrase, truncated protein;
InterProE6NZK8 
PFAME6NZK8 
ProdomE6NZK8 
UniProtKBP76323.1INTG_ECOLI RecName: Full=Putative lambdoid prophage defective integrase
InterProP76323.1 
PFAMP76323.1 
ProdomP76323.1 
UniProtKBP76323RecName: Full=Putative lambdoid prophage defective integrase;
InterProP76323 
PFAMP76323 
ProdomP76323 
GenPept899731689integrase
GenPept899727265integrase
GenPept899722910integrase
GenPept81345798INTG_ECOLI RecName: Full=Putative lambdoid prophage defective integrase
GenPept808735282integrase
GenPept808730868integrase
GenPept1788246predicted defective phage integrase (pseudogene)
GenPept315136573predicted defective phage integrase, truncated protein
GenPept732684169integrase
GenPept7466253E64957 hypothetical protein b1936 - Escherichia coli
GenPept808700669integrase
GenPept808705044integrase
GenPept808709408integrase
GenPept808713767integrase
GenPept808718178integrase
GenPept808722548integrase
GenPept16129883 (NC_000913) orf, hypothetical protein [Escherichia coli K12]