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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P76340.2
Original Database ID ref NP_416478.2
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yedw_ecoli recname: full=probable
transcriptional regulatory protein
yedw
Sequence Length 223

Dataset Information:

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Model Information

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Target Region1-222
Protein Length223
Template PDB Code2hqrA
Template Region1-218
Sequence Identity26%
E-Value0
GA3411
MPQS1.33382
z-DOPE-0.17
TSVMod MethodMTALL
TSVMod RMSD29.63
TSVMod NO350.385
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB2hqrstructure of a atypical orphan response regulator protein revealed a new phosphorylation-independent regulatory mechanism
DBALI2hqrA 
JenaImageLibrary2hqr 
Target Sequence
UniProtKBB1X6B9SubName: Full=Predicted DNA-binding response regulator in two-component system with YedV;
InterProB1X6B9 
PFAMB1X6B9 
ProdomB1X6B9 
UniProtKBG2EY64SubName: Full=Transcriptional regulatory protein YedW;
InterProG2EY64 
PFAMG2EY64 
ProdomG2EY64 
UniProtKBM2PJG0SubName: Full=Transcriptional regulatory protein YedW;
InterProM2PJG0 
PFAMM2PJG0 
ProdomM2PJG0 
UniProtKBH0QDA5SubName: Full=Predicted DNA-binding response regulator in two-component system withYedV;
InterProH0QDA5 
PFAMH0QDA5 
ProdomH0QDA5 
UniProtKBA0A073TIC9SubName: Full=Putative transcriptional regulatory protein yedW {ECO:0000313|EMBL:KEL28664.1};
InterProA0A073TIC9 
PFAMA0A073TIC9 
ProdomA0A073TIC9 
UniProtKBA0A094VPE1SubName: Full=Putative transcriptional regulatory protein yedW;SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:AKO58856.1};
InterProA0A094VPE1 
PFAMA0A094VPE1 
ProdomA0A094VPE1 
UniProtKBA0A069Z873SubName: Full=Putative transcriptional regulatory protein yedW {ECO:0000313|EMBL:KDU55737.1};
InterProA0A069Z873 
PFAMA0A069Z873 
ProdomA0A069Z873 
UniProtKBP76340RecName: Full=Probable transcriptional regulatory protein YedW;
InterProP76340 
PFAMP76340 
ProdomP76340 
UniProtKBP97172RecName: Full=Probable transcriptional regulatory protein YedW;
InterProP97172 
PFAMP97172 
ProdomP97172 
UniProtKBA0A069XM30SubName: Full=Putative transcriptional regulatory protein yedW {ECO:0000313|EMBL:KDU30215.1};
InterProA0A069XM30 
PFAMA0A069XM30 
ProdomA0A069XM30 
UniProtKBC4ZQN9SubName: Full=Predicted DNA-binding response regulator in two-component system with YedV;
InterProC4ZQN9 
PFAMC4ZQN9 
ProdomC4ZQN9 
UniProtKBA0A8F9MTN7SubName: Full=Response regulator transcription factor HprR {ECO:0000313|EMBL:QYE27826.1}
InterProA0A8F9MTN7 
PFAMA0A8F9MTN7 
ProdomA0A8F9MTN7 
UniProtKBA0A8F8DN89SubName: Full=Response regulator transcription factor HprR {ECO:0000313|EMBL:QXZ39053.1}
InterProA0A8F8DN89 
PFAMA0A8F8DN89 
ProdomA0A8F8DN89 
UniProtKBA0A8F7SKQ6SubName: Full=Response regulator transcription factor HprR {ECO:0000313|EMBL:QXW79681.1}
InterProA0A8F7SKQ6 
PFAMA0A8F7SKQ6 
ProdomA0A8F7SKQ6 
UniProtKBA0A5Q3TJP1SubName: Full=Response regulator transcription factor HprR {ECO:0000313|EMBL:QGL44513.1}
InterProA0A5Q3TJP1 
PFAMA0A5Q3TJP1 
ProdomA0A5Q3TJP1 
UniProtKBC4ZQN9SubName: Full=Predicted DNA-binding response regulator in two-component system with YedV;
InterProC4ZQN9 
PFAMC4ZQN9 
ProdomC4ZQN9 
UniProtKBG2EY64SubName: Full=Transcriptional regulatory protein YedW;
InterProG2EY64 
PFAMG2EY64 
ProdomG2EY64 
UniProtKBH0QDA5SubName: Full=Predicted DNA-binding response regulator in two-component system withYedV;
InterProH0QDA5 
PFAMH0QDA5 
ProdomH0QDA5 
UniProtKBB1X6B9SubName: Full=Predicted DNA-binding response regulator in two-component system with YedV;
InterProB1X6B9 
PFAMB1X6B9 
ProdomB1X6B9 
UniProtKBA0A5P1CWX5SubName: Full=DNA-binding response regulator HprR {ECO:0000313|EMBL:EAC1716900.1}SubName: Full=Response regulator transcription factor HprR {ECO:0000313|EMBL:QGF39368.1}
InterProA0A5P1CWX5 
PFAMA0A5P1CWX5 
ProdomA0A5P1CWX5 
UniProtKBP76340RecName: Full=Probable transcriptional regulatory protein YedW;
InterProP76340 
PFAMP76340 
ProdomP76340 
UniProtKBP76340.2YEDW_ECOLI RecName: Full=Probable transcriptional regulatory protein yedW
InterProP76340.2 
PFAMP76340.2 
ProdomP76340.2 
UniProtKBP97172RecName: Full=Probable transcriptional regulatory protein YedW;
InterProP97172 
PFAMP97172 
ProdomP97172 
RefSeqAP_002577.1 predicted DNA-binding response regulator in two-component system withYedV [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_002926966.1 putative DNA-binding response regulator in two-component system with YedV [Escherichia coli BW2952]
RefSeqNP_416478.2 predicted DNA-binding response regulator in two-component system with YedV [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_001730929.1 DNA-binding response regulator in two-component system with YedV [Escherichia coli str. K-12 substr. DH10B]
GenPept817579388response regulator family protein
GenPept664684289transcriptional regulator
GenPept90111362 predicted DNA-binding response regulator in two-component system with YedV [Escherichia coli str. K-12 substr. MG1655]
GenPept899731720transcriptional regulator
GenPept899729672transcriptional regulator
GenPept899725323transcriptional regulator
GenPept89108797 predicted DNA-binding response regulator in two-component system withYedV [Escherichia coli str. K-12 substr. W3110]
GenPept802135429putative DNA-binding response regulator in two-component system with YedV
GenPept732686927transcriptional regulator
GenPept731470900putative DNA-binding response regulator in two-component system with YedV
GenPept730583171putative DNA-binding response regulator in two-component system with YedV
GenPept687677115predicted DNA-binding response regulator in two-component system with YedV
GenPept687672823predicted DNA-binding response regulator in two-component system with YedV
GenPept682119471response regulator family protein
GenPept557272281transcriptional regulatory protein YedW
GenPept549813422putative DNA-binding response regulator in two-component system with YedV
GenPept359332388predicted DNA-binding response regulator in two-component system withYedV
GenPept238901170 putative DNA-binding response regulator in two-component system with YedV [Escherichia coli BW2952]
GenPept238862252predicted DNA-binding response regulator in two-component system with YedV
GenPept170081609 DNA-binding response regulator in two-component system with YedV [Escherichia coli str. K-12 substr. DH10B]
GenPept169889444predicted DNA-binding response regulator in two-component system with YedV
GenPept808702451transcriptional regulator
GenPept808706820transcriptional regulator
GenPept808711173transcriptional regulator
GenPept87082012response regulator family protein
GenPept85675172predicted DNA-binding response regulator in two-component system withYedV
GenPept817591808response regulator family protein
GenPept817587668response regulator family protein
GenPept817583527response regulator family protein
GenPept817575246response regulator family protein
GenPept808737089transcriptional regulator
GenPept808732643transcriptional regulator
GenPept808724324transcriptional regulator
GenPept808719962transcriptional regulator
GenPept808715541transcriptional regulator
GenPept13878938YEDW_ECOLI RecName: Full=Probable transcriptional regulatory protein yedW
GenBankAAC75035.2 predicted DNA-binding response regulator in two-component system with YedV [Escherichia coli str. K-12 substr. MG1655]
GenBankACB03151.1 predicted DNA-binding response regulator in two-component system with YedV [Escherichia coli str. K-12 substr. DH10B]
GenBankACR64250.1 predicted DNA-binding response regulator in two-component system with YedV [Escherichia coli BW2952]