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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76515.1
Original Database ID ref NP_416863.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation yfds_ecoli recname: full=uncharacterized
protein yfds
Sequence Length 120

Dataset Information:

The newest dataset for this sequence was created on 2011-08-28. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region9-91
Protein Length120
Template PDB Code1w7jB
Template Region24-123
Sequence Identity35%
E-Value0.72
GA3410.29
MPQS0.882167
z-DOPE0.82
TSVMod MethodMSALL
TSVMod RMSD13.191
TSVMod NO350.061
Datasete_coli_83333_B1
ModPipe VersionSVN.r1372
Model Date2011-08-28

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1w7jcrystal structure of myosin v motor with essential light chain + adp-befx - near rigor
DBALI1w7jB 
CATH1.10.238.10 Domain: 1w7jB01 EF-hand (81%)
CATH1.10.238.10 Domain: 1w7jB02 EF-hand (58%)
JenaImageLibrary1w7j 
Target Sequence
UniProtKBT9VLD4SubName: Full=Phage protein;
InterProT9VLD4 
PFAMT9VLD4 
ProdomT9VLD4 
UniProtKBL4N6B8SubName: Full=Phage protein;
InterProL4N6B8 
PFAML4N6B8 
ProdomL4N6B8 
UniProtKBL4FN48SubName: Full=Phage protein;
InterProL4FN48 
PFAML4FN48 
ProdomL4FN48 
UniProtKBL4FJ76SubName: Full=Phage protein;
InterProL4FJ76 
PFAML4FJ76 
ProdomL4FJ76 
UniProtKBL3NLL4SubName: Full=Phage protein;
InterProL3NLL4 
PFAML3NLL4 
ProdomL3NLL4 
UniProtKBL2ZLT6SubName: Full=Phage protein;
InterProL2ZLT6 
PFAML2ZLT6 
ProdomL2ZLT6 
UniProtKBG2EZD3SubName: Full=Putative uncharacterized protein;
InterProG2EZD3 
PFAMG2EZD3 
ProdomG2EZD3 
UniProtKBF9R4R1SubName: Full=Putative uncharacterized protein;
InterProF9R4R1 
PFAMF9R4R1 
ProdomF9R4R1 
UniProtKBC9QQH6SubName: Full=Uncharacterized protein;
InterProC9QQH6 
PFAMC9QQH6 
ProdomC9QQH6 
UniProtKBC4ZVP8SubName: Full=CPS-53 (KpLE1) prophage; predicted protein;
InterProC4ZVP8 
PFAMC4ZVP8 
ProdomC4ZVP8 
UniProtKBB7ME57SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CAR01879.1};
InterProB7ME57 
PFAMB7ME57 
ProdomB7ME57 
UniProtKBB1X9N3SubName: Full=CPS-53 (KpLE1) prophage; predicted protein;
InterProB1X9N3 
PFAMB1X9N3 
ProdomB1X9N3 
UniProtKBA0A0E2L9V4SubName: Full=Phage protein {ECO:0000313|EMBL:EQX32931.1};
InterProA0A0E2L9V4 
PFAMA0A0E2L9V4 
ProdomA0A0E2L9V4 
UniProtKBL5IEZ5SubName: Full=Phage protein;
InterProL5IEZ5 
PFAML5IEZ5 
ProdomL5IEZ5 
UniProtKBM2PGE2SubName: Full=Uncharacterized protein;
InterProM2PGE2 
PFAMM2PGE2 
ProdomM2PGE2 
UniProtKBT9SKP8SubName: Full=Phage protein;
InterProT9SKP8 
PFAMT9SKP8 
ProdomT9SKP8 
UniProtKBT9HFK0SubName: Full=Phage protein;
InterProT9HFK0 
PFAMT9HFK0 
ProdomT9HFK0 
UniProtKBT9BEY1SubName: Full=Phage protein;
InterProT9BEY1 
PFAMT9BEY1 
ProdomT9BEY1 
UniProtKBT8VX14SubName: Full=Phage protein;
InterProT8VX14 
PFAMT8VX14 
ProdomT8VX14 
UniProtKBT8TVX1SubName: Full=Phage protein;
InterProT8TVX1 
PFAMT8TVX1 
ProdomT8TVX1 
UniProtKBT8BXT5SubName: Full=Phage protein;
InterProT8BXT5 
PFAMT8BXT5 
ProdomT8BXT5 
UniProtKBA0A094VRF6SubName: Full=Phage protein {ECO:0000313|EMBL:KLY04965.1};SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKO57873.1};
InterProA0A094VRF6 
PFAMA0A094VRF6 
ProdomA0A094VRF6 
UniProtKBP76515RecName: Full=Uncharacterized protein YfdS;
InterProP76515 
PFAMP76515 
ProdomP76515 
UniProtKBS0WWV2SubName: Full=Phage protein;
InterProS0WWV2 
PFAMS0WWV2 
ProdomS0WWV2 
UniProtKBQ2MAK5RecName: Full=Uncharacterized protein YfdS;
InterProQ2MAK5 
PFAMQ2MAK5 
ProdomQ2MAK5 
UniProtKBS0TP95SubName: Full=Phage protein;
InterProS0TP95 
PFAMS0TP95 
ProdomS0TP95 
UniProtKBT7L0F3SubName: Full=Phage protein;
InterProT7L0F3 
PFAMT7L0F3 
ProdomT7L0F3 
UniProtKBC9QQH6SubName: Full=Putative uncharacterized protein yfdS;
InterProC9QQH6 
PFAMC9QQH6 
ProdomC9QQH6 
UniProtKBA0A5Q3TB22SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QGL41669.1}
InterProA0A5Q3TB22 
PFAMA0A5Q3TB22 
ProdomA0A5Q3TB22 
UniProtKBA0A855SM20SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:PSY39945.1}
InterProA0A855SM20 
PFAMA0A855SM20 
ProdomA0A855SM20 
UniProtKBA0A8F2QYR2SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QWV78526.1}
InterProA0A8F2QYR2 
PFAMA0A8F2QYR2 
ProdomA0A8F2QYR2 
UniProtKBA0A8F8H0I4SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QXZ38200.1}
InterProA0A8F8H0I4 
PFAMA0A8F8H0I4 
ProdomA0A8F8H0I4 
UniProtKBA0A8F9HDP1SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:QYE26979.1}
InterProA0A8F9HDP1 
PFAMA0A8F9HDP1 
ProdomA0A8F9HDP1 
UniProtKBB1X9N3SubName: Full=CPS-53 (KpLE1) prophage; predicted protein;
InterProB1X9N3 
PFAMB1X9N3 
ProdomB1X9N3 
UniProtKBF9R4R1SubName: Full=Putative uncharacterized protein;
InterProF9R4R1 
PFAMF9R4R1 
ProdomF9R4R1 
UniProtKBB7ME57SubName: Full=Putative uncharacterized protein yfdS;
InterProB7ME57 
PFAMB7ME57 
ProdomB7ME57 
UniProtKBQ2MAK5Hypothetical protein yfdS
InterProQ2MAK5 
PFAMQ2MAK5 
ProdomQ2MAK5 
UniProtKBG2EZD3SubName: Full=Putative uncharacterized protein;
InterProG2EZD3 
PFAMG2EZD3 
ProdomG2EZD3 
UniProtKBC4ZVP8SubName: Full=CPS-53 (KpLE1) prophage; predicted protein;
InterProC4ZVP8 
PFAMC4ZVP8 
ProdomC4ZVP8 
UniProtKBQ2MAK5RecName: Full=Uncharacterized protein YfdS;
InterProQ2MAK5 
PFAMQ2MAK5 
ProdomQ2MAK5 
UniProtKBP76515.1YFDS_ECOLI RecName: Full=Uncharacterized protein yfdS
InterProP76515.1 
PFAMP76515.1 
ProdomP76515.1 
UniProtKBP76515RecName: Full=Uncharacterized protein YfdS;
InterProP76515 
PFAMP76515 
ProdomP76515 
RefSeqYP_002927326.1 CPS-53 (KpLE1) prophage; hypothetical protein [Escherichia coli BW2952]
RefSeqNP_416863.1 CPS-53 (KpLE1) prophage; predicted protein [Escherichia coli str. K-12 substr. MG1655]
RefSeqAP_002960.1 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
RefSeqYP_001731296.1 CPS-53 (KpLE1) prophage; hypothetical protein [Escherichia coli str. K-12 substr. DH10B]
RefSeqYP_002390358.1 conserved hypothetical protein; CPS-53 (KpLE1) prophage [Escherichia coli S88]
GenPept682119839CPS-53 (KpLE1) prophage; uncharacterized protein
GenPept687673211CPS-53 (KpLE1) prophage; predicted protein
GenPept687677505CPS-53 (KpLE1) prophage; predicted protein
GenPept730583568CPS-53 (KpLE1) prophage; putative protein
GenPept557272640CPS-53 (KpLE1) prophage protein
GenPept315136996CPS-53 (KpLE1) prophage; hypothetical protein
GenPept664684665hypothetical protein HQ24_11755
GenPept260448548conserved hypothetical protein
GenPept16130294 CPS-53 (KpLE1) prophage; predicted protein [Escherichia coli str. K-12 substr. MG1655]
GenPept169889811CPS-53 (KpLE1) prophage; predicted protein
GenPept170081976 CPS-53 (KpLE1) prophage; hypothetical protein [Escherichia coli str. K-12 substr. DH10B]
GenPept1788704CPS-53 (KpLE1) prophage; uncharacterized protein
GenPept20140536YFDS_ECOLI RecName: Full=Uncharacterized protein yfdS
GenPept218364214conserved hypothetical protein; CPS-53 (KpLE1) prophage
GenPept218557445 conserved hypothetical protein; CPS-53 (KpLE1) prophage [Escherichia coli S88]
GenPept238860662CPS-53 (KpLE1) prophage; predicted protein
GenPept549813786CPS-53 (KpLE1) prophage; putative protein
GenPept238901530 CPS-53 (KpLE1) prophage; hypothetical protein [Escherichia coli BW2952]
GenPept731471297CPS-53 (KpLE1) prophage; putative protein
GenPept732683761hypothetical protein EO53_06040
GenPept7459800G65009 hypothetical protein b2362 - Escherichia coli (strain K-12)
GenPept899727673hypothetical protein ADZ27_12185
GenPept817579754CPS-53 (KpLE1) prophage, uncharacterized protein
GenPept817583893CPS-53 (KpLE1) prophage, uncharacterized protein
GenPept817588034CPS-53 (KpLE1) prophage, uncharacterized protein
GenPept817592174CPS-53 (KpLE1) prophage, uncharacterized protein
GenPept89109180 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept899723318hypothetical protein ADS71_12185
GenPept932860426hypothetical protein BN1843_29240
GenPept899732110hypothetical protein ADZ28_12185
GenPept817575612CPS-53 (KpLE1) prophage, uncharacterized protein
GenPept808735692hypothetical protein SF31_16240
GenPept808731273hypothetical protein SH07_15935
GenPept802135774CPS-53 (KpLE1) prophage; putative protein
GenPept808701079hypothetical protein SH05_16045
GenPept808705453hypothetical protein SH02_16000
GenPept808709813hypothetical protein SH08_16040
GenPept808714175hypothetical protein SH03_15940
GenPept808718584hypothetical protein SH06_16245
GenPept85675376hypothetical protein
GenPept808722956hypothetical protein SH04_15930
GenBankAAC75421.1 CPS-53 (KpLE1) prophage; predicted protein [Escherichia coli str. K-12 substr. MG1655]
GenBankACB03518.1 CPS-53 (KpLE1) prophage; predicted protein [Escherichia coli str. K-12 substr. DH10B]
GenBankACR62660.1 CPS-53 (KpLE1) prophage; predicted protein [Escherichia coli BW2952]
GenBankACX38970.1 conserved hypothetical protein [Escherichia coli DH1]
EMBLCAR01879.1