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Sequence Information

Primary Database Link A0A090LDS5
Original Database ID ref NP_416937.2
Organism Escherichia coli, Klebsiella pneumoniae, etc.
Annotation subname: full=integrase {eco:0000313|embl:ako57951.1};subname:
full=putative pro phage cps-53
integrase;
Sequence Length 402

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region105-359
Protein Length402
Template PDB Code1z19A
Template Region76-333
Sequence Identity15%
E-Value0
GA3411
MPQS0.778628
z-DOPE0.07
TSVMod MethodMSALL
TSVMod RMSD5.51
TSVMod NO350.649
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB1z19crystal structure of a lambda integrase(75-356) dimer bound to a coc' core site
DBALI1z19A 
CATH1.10.150.130 Domain: 1z19A01 DNA polymerase; domain 1 (99%)
CATH1.10.443.10 Domain: 1z19A02 Intergrase catalytic core (86%)
JenaImageLibrary1z19 
Target Sequence
UniProtKBA0A090LDS5SubName: Full=Integrase {ECO:0000313|EMBL:AKO57951.1};SubName: Full=Putative prophage CPS-53 integrase;
InterProA0A090LDS5 
PFAMA0A090LDS5 
ProdomA0A090LDS5 
UniProtKBC4ZX15SubName: Full=CPZ-55 prophage; predicted integrase;
InterProC4ZX15 
PFAMC4ZX15 
ProdomC4ZX15 
UniProtKBF9QVT6SubName: Full=CPZ-55 prophage; putative integrase;
InterProF9QVT6 
PFAMF9QVT6 
ProdomF9QVT6 
UniProtKBG2F0J3SubName: Full=CPZ-55 prophage; putative integrase;
InterProG2F0J3 
PFAMG2F0J3 
ProdomG2F0J3 
UniProtKBP76542RecName: Full=Putative prophage CPZ-55 integrase;
InterProP76542 
PFAMP76542 
ProdomP76542 
UniProtKBG2F0J3SubName: Full=CPZ-55 prophage; putative integrase;
InterProG2F0J3 
PFAMG2F0J3 
ProdomG2F0J3 
UniProtKBF9QVT6SubName: Full=CPZ-55 prophage; putative integrase;
InterProF9QVT6 
PFAMF9QVT6 
ProdomF9QVT6 
UniProtKBA0A1X9QD57SubName: Full=Integrase {ECO:0000313|EMBL:ARQ20478.1}
InterProA0A1X9QD57 
PFAMA0A1X9QD57 
ProdomA0A1X9QD57 
UniProtKBC4ZX15SubName: Full=CPZ-55 prophage; predicted integrase;
InterProC4ZX15 
PFAMC4ZX15 
ProdomC4ZX15 
UniProtKBA0A6G6ZKF0SubName: Full=Integrase arm-type DNA-binding domain-containing protein {ECO:0000313|EMBL:QIH03244.1}
InterProA0A6G6ZKF0 
PFAMA0A6G6ZKF0 
ProdomA0A6G6ZKF0 
UniProtKBA0A507WRJ3SubName: Full=DUF4102 domain-containing protein {ECO:0000313|EMBL:TQD02425.1}SubName: Full=Integrase arm-type DNA-binding domain-containing protein {ECO:0000313|EMBL:QQZ94646.1}
InterProA0A507WRJ3 
PFAMA0A507WRJ3 
ProdomA0A507WRJ3 
UniProtKBP76542.2INTZ_ECOLI RecName: Full=Putative prophage CPZ-55 integrase
InterProP76542.2 
PFAMP76542.2 
ProdomP76542.2 
UniProtKBP76542RecName: Full=Putative prophage CPZ-55 integrase;
InterProP76542 
PFAMP76542 
ProdomP76542 
RefSeqNP_416937.2 CPZ-55 prophage; predicted integrase [Escherichia coli str. K-12 substr. MG1655]
RefSeqYP_002927401.1 CPZ-55 prophage; putative integrase [Escherichia coli BW2952]
GenPept817592250CPZ-55 prophage, putative phage integrase
GenPept145698295 CPZ-55 prophage; predicted integrase [Escherichia coli str. K-12 substr. MG1655]
GenPept238860664CPZ-55 prophage; predicted integrase
GenPept238901605 CPZ-55 prophage; putative integrase [Escherichia coli BW2952]
GenPept549813861CPZ-55 prophage; predicted integrase
GenPept557272715CPZ-55 prophage; putative integrase
GenPept6016384INTZ_ECOLI RecName: Full=Putative prophage CPZ-55 integrase
GenPept664684740integrase
GenPept682119915CPZ-55 prophage; putative phage integrase
GenPept732683684integrase
GenPept808735770integrase
GenPept817575688CPZ-55 prophage, putative phage integrase
GenPept817579830CPZ-55 prophage, putative phage integrase
GenPept817583969CPZ-55 prophage, putative phage integrase
GenPept817588110CPZ-55 prophage, putative phage integrase
GenPept145693166CPZ-55 prophage; putative phage integrase
GenBankACR62662.1 CPZ-55 prophage; predicted integrase [Escherichia coli BW2952]
GenBankAAC75495.2 CPZ-55 prophage; predicted integrase [Escherichia coli str. K-12 substr. MG1655]