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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P76632.1
Original Database ID ref NP_417239.1
Organism Escherichia coli, Shigella sonnei, etc.
Annotation ygck_ecoli recname: full=uncharacterized
protein ygck
Sequence Length 160

Dataset Information:

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Model Information

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Target Region3-159
Protein Length160
Template PDB Code5h9fB
Template Region3-159
Sequence Identity100%
E-Value0
GA3411
MPQS2.28075
z-DOPE-2.26
TSVMod MethodMSALL
TSVMod RMSD1.1
TSVMod NO350.949
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB5h9f
DBALI5h9fB 
JenaImageLibrary5h9f 
Target Sequence
UniProtKBA0A069YZ54SubName: Full=CRISPR-associated protein CasB/Cse2 {ECO:0000313|EMBL:KDU51888.1};
InterProA0A069YZ54 
PFAMA0A069YZ54 
ProdomA0A069YZ54 
UniProtKBQ2MA70RecName: Full=CRISPR system Cascade subunit CasB;
InterProQ2MA70 
PFAMQ2MA70 
ProdomQ2MA70 
UniProtKBP76632RecName: Full=CRISPR system Cascade subunit CasB;
InterProP76632 
PFAMP76632 
ProdomP76632 
UniProtKBM2NXW3SubName: Full=CRISPR-associated Cse2 family protein;
InterProM2NXW3 
PFAMM2NXW3 
ProdomM2NXW3 
UniProtKBL8C4P5SubName: Full=CRISPR-associated protein, Cse2 family;
InterProL8C4P5 
PFAML8C4P5 
ProdomL8C4P5 
UniProtKBL3ZNC3SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProL3ZNC3 
PFAML3ZNC3 
ProdomL3ZNC3 
UniProtKBI4TW08SubName: Full=CRISPR-associated protein, Cse2 family;
InterProI4TW08 
PFAMI4TW08 
ProdomI4TW08 
UniProtKBI2ZQK6SubName: Full=CRISPR type I-E protein CasB/Cse2;
InterProI2ZQK6 
PFAMI2ZQK6 
ProdomI2ZQK6 
UniProtKBF9QWW3SubName: Full=CRISPR-associated Cse2 family protein;
InterProF9QWW3 
PFAMF9QWW3 
ProdomF9QWW3 
UniProtKBL4WAK3SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProL4WAK3 
PFAML4WAK3 
ProdomL4WAK3 
UniProtKBG2BCY9SubName: Full=CRISPR-associated protein Cse2 family protein;
InterProG2BCY9 
PFAMG2BCY9 
ProdomG2BCY9 
UniProtKBS0UD02SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProS0UD02 
PFAMS0UD02 
ProdomS0UD02 
UniProtKBS0XXA4SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProS0XXA4 
PFAMS0XXA4 
ProdomS0XXA4 
UniProtKBA0A070YA98SubName: Full=CRISPR-associated protein CasB/Cse2 {ECO:0000313|EMBL:KDX87900.1};
InterProA0A070YA98 
PFAMA0A070YA98 
ProdomA0A070YA98 
UniProtKBA0A073TAT3SubName: Full=CRISPR-associated protein CasB/Cse2 {ECO:0000313|EMBL:KEL24205.1};
InterProA0A073TAT3 
PFAMA0A073TAT3 
ProdomA0A073TAT3 
UniProtKBA0A074HP95SubName: Full=CRISPR-associated protein CasB/Cse2 {ECO:0000313|EMBL:KEN96212.1};
InterProA0A074HP95 
PFAMA0A074HP95 
ProdomA0A074HP95 
UniProtKBA0A080GP29SubName: Full=CRISPR-associated protein CasB/Cse2 {ECO:0000313|EMBL:KEN89051.1};
InterProA0A080GP29 
PFAMA0A080GP29 
ProdomA0A080GP29 
UniProtKBA0A080I2J8SubName: Full=CRISPR-associated protein CasB/Cse2 {ECO:0000313|EMBL:KEO22812.1};
InterProA0A080I2J8 
PFAMA0A080I2J8 
ProdomA0A080I2J8 
UniProtKBA0A094VPQ1SubName: Full=CRISPR system cascade subunit casb {ECO:0000313|EMBL:KLX53200.1};SubName: Full=CRISPR-associated Cse2 family protein {ECO:0000313|EMBL:CEE03983.1};SubName: Full=CRISPR-associated protein
InterProA0A094VPQ1 
PFAMA0A094VPQ1 
ProdomA0A094VPQ1 
UniProtKBA0A0G3HZ75SubName: Full=CRISP RNA (CrRNA) containing Cascade antiviral complex protein {ECO:0000313|EMBL:AKK18611.1};
InterProA0A0G3HZ75 
PFAMA0A0G3HZ75 
ProdomA0A0G3HZ75 
UniProtKBT9N3U2SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProT9N3U2 
PFAMT9N3U2 
ProdomT9N3U2 
UniProtKBS1KJL1SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProS1KJL1 
PFAMS1KJL1 
ProdomS1KJL1 
UniProtKBS1JZ05SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProS1JZ05 
PFAMS1JZ05 
ProdomS1JZ05 
UniProtKBG2F055SubName: Full=CRISPR-associated Cse2 family protein;
InterProG2F055 
PFAMG2F055 
ProdomG2F055 
UniProtKBD8B9P4SubName: Full=CRISPR system CASCADE complex protein CasB {ECO:0000313|EMBL:EFJ64186.1};
InterProD8B9P4 
PFAMD8B9P4 
ProdomD8B9P4 
UniProtKBD8BTP1SubName: Full=CRISPR system CASCADE complex protein CasB {ECO:0000313|EMBL:EFI89987.1};
InterProD8BTP1 
PFAMD8BTP1 
ProdomD8BTP1 
UniProtKBA0A069XG13SubName: Full=CRISPR-associated protein CasB/Cse2 {ECO:0000313|EMBL:KDU28608.1};
InterProA0A069XG13 
PFAMA0A069XG13 
ProdomA0A069XG13 
UniProtKBL3KED7SubName: Full=CRISPR type I-e/-associated protein casb/cse2 {ECO:0000313|EMBL:ELD97355.1};
InterProL3KED7 
PFAML3KED7 
ProdomL3KED7 
UniProtKBA0A0E3MX09SubName: Full=CRISPR system Cascade subunit CasB {ECO:0000313|EMBL:AKA91810.1};
InterProA0A0E3MX09 
PFAMA0A0E3MX09 
ProdomA0A0E3MX09 
UniProtKBI2PBI0SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProI2PBI0 
PFAMI2PBI0 
ProdomI2PBI0 
UniProtKBH0Q9G4SubName: Full=Uncharacterized protein;
InterProH0Q9G4 
PFAMH0Q9G4 
ProdomH0Q9G4 
UniProtKBD8ASR5SubName: Full=CRISPR system CASCADE complex protein CasB {ECO:0000313|EMBL:EFK13800.1};
InterProD8ASR5 
PFAMD8ASR5 
ProdomD8ASR5 
UniProtKBC9R0C2SubName: Full=CRISPR-associated protein, Cse2 family;SubName: Full=Uncharacterized protein;
InterProC9R0C2 
PFAMC9R0C2 
ProdomC9R0C2 
UniProtKBW1BN54SubName: Full=CRISPR-associated protein, Cse2 family {ECO:0000313|EMBL:CDK82091.1};
InterProW1BN54 
PFAMW1BN54 
ProdomW1BN54 
UniProtKBC4ZZR3SubName: Full=Predicted protein;
InterProC4ZZR3 
PFAMC4ZZR3 
ProdomC4ZZR3 
UniProtKBT9MLK2SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProT9MLK2 
PFAMT9MLK2 
ProdomT9MLK2 
UniProtKBS1A459SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProS1A459 
PFAMS1A459 
ProdomS1A459 
UniProtKBQ46900RecName: Full=CRISPR system Cascade subunit CasB;
InterProQ46900 
PFAMQ46900 
ProdomQ46900 
UniProtKBT8Y375SubName: Full=CRISPR type I-e/-associated protein casb/cse2 {ECO:0000313|EMBL:EQX49929.1};
InterProT8Y375 
PFAMT8Y375 
ProdomT8Y375 
UniProtKBB1XDH2SubName: Full=Predicted protein;
InterProB1XDH2 
PFAMB1XDH2 
ProdomB1XDH2 
UniProtKBI0ZWB0SubName: Full=CRISPR-associated protein, Cse2 family;
InterProI0ZWB0 
PFAMI0ZWB0 
ProdomI0ZWB0 
UniProtKBH0Q9G4SubName: Full=Predicted protein;
InterProH0Q9G4 
PFAMH0Q9G4 
ProdomH0Q9G4 
UniProtKBD8BTP1SubName: Full=CRISPR-associated protein, Cse2 family;
InterProD8BTP1 
PFAMD8BTP1 
ProdomD8BTP1 
UniProtKBF9QWW3SubName: Full=CRISPR-associated Cse2 family protein;
InterProF9QWW3 
PFAMF9QWW3 
ProdomF9QWW3 
UniProtKBI0ZWB0SubName: Full=CRISPR-associated protein, Cse2 family;
InterProI0ZWB0 
PFAMI0ZWB0 
ProdomI0ZWB0 
UniProtKBA0A1X3JCZ9SubName: Full=CRISPR-associated protein, Cse2 family {ECO:0000313|EMBL:OSL05148.1}
InterProA0A1X3JCZ9 
PFAMA0A1X3JCZ9 
ProdomA0A1X3JCZ9 
UniProtKBA0A5Q3TDJ3SubName: Full=Type I-E CRISPR-associated protein Cse2/CasB {ECO:0000313|EMBL:QGL42020.1}
InterProA0A5Q3TDJ3 
PFAMA0A5Q3TDJ3 
ProdomA0A5Q3TDJ3 
UniProtKBG2F055SubName: Full=CRISPR-associated Cse2 family protein;
InterProG2F055 
PFAMG2F055 
ProdomG2F055 
UniProtKBG2BCY9SubName: Full=CRISPR-associated protein Cse2 family protein;
InterProG2BCY9 
PFAMG2BCY9 
ProdomG2BCY9 
UniProtKBA0A8F8DL17SubName: Full=Type I-E CRISPR-associated protein Cse2/CasB {ECO:0000313|EMBL:QXZ37845.1}
InterProA0A8F8DL17 
PFAMA0A8F8DL17 
ProdomA0A8F8DL17 
UniProtKBC4ZZR3SubName: Full=Predicted protein;
InterProC4ZZR3 
PFAMC4ZZR3 
ProdomC4ZZR3 
UniProtKBA0A8A5HAN1SubName: Full=Type I-E CRISPR-associated protein Cse2/CasB {ECO:0000313|EMBL:QTF27351.1}
InterProA0A8A5HAN1 
PFAMA0A8A5HAN1 
ProdomA0A8A5HAN1 
UniProtKBA0A8F9MP62SubName: Full=Type I-E CRISPR-associated protein Cse2/CasB {ECO:0000313|EMBL:QYE26624.1}
InterProA0A8F9MP62 
PFAMA0A8F9MP62 
ProdomA0A8F9MP62 
UniProtKBD8ASR5SubName: Full=CRISPR-associated protein, Cse2 family;
InterProD8ASR5 
PFAMD8ASR5 
ProdomD8ASR5 
UniProtKBA0A8A5HND6SubName: Full=Type I-E CRISPR-associated protein Cse2/CasB {ECO:0000313|EMBL:QTF31983.1}
InterProA0A8A5HND6 
PFAMA0A8A5HND6 
ProdomA0A8A5HND6 
UniProtKBA0A7Z8BKX9SubName: Full=Type I-E CRISPR-associated protein Cse2/CasB {ECO:0000313|EMBL:TFB43756.1}
InterProA0A7Z8BKX9 
PFAMA0A7Z8BKX9 
ProdomA0A7Z8BKX9 
UniProtKBD8B9P4SubName: Full=CRISPR-associated protein, Cse2 family;
InterProD8B9P4 
PFAMD8B9P4 
ProdomD8B9P4 
UniProtKBB1XDH2SubName: Full=Predicted protein;
InterProB1XDH2 
PFAMB1XDH2 
ProdomB1XDH2 
UniProtKBC9R0C2SubName: Full=CRISPR-associated protein, Cse2 family;SubName: Full=Putative uncharacterized protein ygcK;
InterProC9R0C2 
PFAMC9R0C2 
ProdomC9R0C2 
UniProtKBQ2MA70Hypothetical protein ygcK
InterProQ2MA70 
PFAMQ2MA70 
ProdomQ2MA70 
UniProtKBI4TW08SubName: Full=CRISPR-associated protein, Cse2 family;
InterProI4TW08 
PFAMI4TW08 
ProdomI4TW08 
UniProtKBI2PBI0SubName: Full=CRISPR type I-e/-associated protein casb/cse2;
InterProI2PBI0 
PFAMI2PBI0 
ProdomI2PBI0 
UniProtKBI2ZQK6SubName: Full=CRISPR type I-E protein CasB/Cse2;
InterProI2ZQK6 
PFAMI2ZQK6 
ProdomI2ZQK6 
UniProtKBP76632RecName: Full=CRISPR system Cascade subunit CasB;
InterProP76632 
PFAMP76632 
ProdomP76632 
UniProtKBQ2MA70RecName: Full=CRISPR system Cascade subunit CasB;
InterProQ2MA70 
PFAMQ2MA70 
ProdomQ2MA70 
UniProtKBP76632.1YGCK_ECOLI RecName: Full=Uncharacterized protein ygcK
InterProP76632.1 
PFAMP76632.1 
ProdomP76632.1 
UniProtKBQ46900RecName: Full=CRISPR system Cascade subunit CasB;
InterProQ46900 
PFAMQ46900 
ProdomQ46900 
RefSeqZP_07164395.1 CRISPR-associated protein, Cse2 family [Escherichia coli MS 116-1]
RefSeqYP_001731654.1 hypothetical protein ECDH10B_2927 [Escherichia coli str. K-12 substr. DH10B]
RefSeqZP_07171069.1 CRISPR-associated protein, Cse2 family [Escherichia coli MS 175-1]
RefSeqAP_003326.1 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
RefSeqZP_07184822.1 CRISPR-associated protein, Cse2 family [Escherichia coli MS 196-1]
RefSeqYP_002927692.1 hypothetical protein BWG_2495 [Escherichia coli BW2952]
RefSeqNP_417239.1 CRISP RNA (crRNA) containing Cascade antiviral complex protein [Escherichia coli str. K-12 substr. MG1655]
PDB4U7UOChain O, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli
PDB4U7UNChain N, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli
PDB4U7UCChain C, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli
PDB4U7UBChain B, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli
PDB4QYZBChain B, Crystal Structure Of A Crispr Rna-guided Surveillance Complex, Cascade, Bound To A Ssdna Target
PDB4QYZCChain C, Crystal Structure Of A Crispr Rna-guided Surveillance Complex, Cascade, Bound To A Ssdna Target
GenPept260448190CRISPR-associated protein, Cse2 family
GenPept89109546 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept301020755 CRISPR-associated protein, Cse2 family [Escherichia coli MS 196-1]
GenPept315137366hypothetical protein ECDH1ME8569_2669
GenPept300958968 CRISPR-associated protein, Cse2 family [Escherichia coli MS 175-1]
GenPept675082789B Chain B, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli
GenPept899728029CRISPR-associated protein
GenPept899732486CRISPR-associated protein
GenPept932860830hypothetical protein BN1843_33280
GenPept85675580hypothetical protein
GenPept827622877CRISP RNA (crRNA) containing Cascade antiviral complex protein
GenPept827619350CRISP RNA (crRNA) containing Cascade antiviral complex protein
GenPept817592542CRISP RNA (crRNA) containing Cascade antiviral complex protein
GenPept817588402CRISP RNA (crRNA) containing Cascade antiviral complex protein
GenPept817584261CRISP RNA (crRNA) containing Cascade antiviral complex protein
GenPept675970047C Chain C, Crystal Structure Of A Crispr Rna-guided Surveillance Complex, Cascade, Bound To A Ssdna Target
GenPept675970046B Chain B, Crystal Structure Of A Crispr Rna-guided Surveillance Complex, Cascade, Bound To A Ssdna Target
GenPept675082802O Chain O, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli
GenPept675082801N Chain N, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli
GenPept675082790C Chain C, Crystal Structure Of Rna-guided Immune Cascade Complex From E.coli