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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P76909
Original Database ID ref NP_416270.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=uncharacterized
abc transporter atp-binding protein
ynjd;
Sequence Length 217

Dataset Information:

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Model Information

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Target Region1-217
Protein Length217
Template PDB Code3tifA
Template Region1-230
Sequence Identity31%
E-Value0
GA3411
MPQS1.4111
z-DOPE-0.9
TSVMod MethodMSALL
TSVMod RMSD2.816
TSVMod NO350.869
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3tif
DBALI3tifA 
JenaImageLibrary3tif 
Target Sequence
UniProtKBM8LKF9SubName: Full=ABC transporter family protein;
InterProM8LKF9 
PFAMM8LKF9 
ProdomM8LKF9 
UniProtKBH4WBC3SubName: Full=ABC transporter family protein;
InterProH4WBC3 
PFAMH4WBC3 
ProdomH4WBC3 
UniProtKBI2I8Z2SubName: Full=Putative transporter subunit ATP-binding protein of ABC superfamily;
InterProI2I8Z2 
PFAMI2I8Z2 
ProdomI2I8Z2 
UniProtKBH4VWM6SubName: Full=ABC transporter family protein;
InterProH4VWM6 
PFAMH4VWM6 
ProdomH4VWM6 
UniProtKBH4UJW5SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EHV59865.1};
InterProH4UJW5 
PFAMH4UJW5 
ProdomH4UJW5 
UniProtKBI2ZNT2SubName: Full=ABC transporter, ATP-binding protein;
InterProI2ZNT2 
PFAMI2ZNT2 
ProdomI2ZNT2 
UniProtKBI2Y6M5SubName: Full=ABC transporter, ATP-binding protein;
InterProI2Y6M5 
PFAMI2Y6M5 
ProdomI2Y6M5 
UniProtKBI2XD30SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EII46900.1};
InterProI2XD30 
PFAMI2XD30 
ProdomI2XD30 
UniProtKBK5H560SubName: Full=ABC transporter family protein;
InterProK5H560 
PFAMK5H560 
ProdomK5H560 
UniProtKBK5C5K3SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EKJ84521.1};
InterProK5C5K3 
PFAMK5C5K3 
ProdomK5C5K3 
UniProtKBL3KQN5SubName: Full=ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELE00564.1};
InterProL3KQN5 
PFAML3KQN5 
ProdomL3KQN5 
UniProtKBA0A0H3X625SubName: Full=Transporter subunit {ECO:0000313|EMBL:AKM35305.1};
InterProA0A0H3X625 
PFAMA0A0H3X625 
ProdomA0A0H3X625 
UniProtKBA0A0G3HWY4SubName: Full=Putative transporter subunit: ATP-binding component of ABC superfamily protein {ECO:0000313|EMBL:AKK17821.1};
InterProA0A0G3HWY4 
PFAMA0A0G3HWY4 
ProdomA0A0G3HWY4 
UniProtKBG2EXK7SubName: Full=Putative transporter subunit ATP-binding protein of ABC superfamily;
InterProG2EXK7 
PFAMG2EXK7 
ProdomG2EXK7 
UniProtKBM7UJD4SubName: Full=Putative sulfate/thiosulfate transporter subunit: ATP-binding component of ABC transporter;
InterProM7UJD4 
PFAMM7UJD4 
ProdomM7UJD4 
UniProtKBM8PB13SubName: Full=ABC transporter family protein;
InterProM8PB13 
PFAMM8PB13 
ProdomM8PB13 
UniProtKBE9WXE5SubName: Full=ABC transporter;
InterProE9WXE5 
PFAME9WXE5 
ProdomE9WXE5 
UniProtKBE9YCW1SubName: Full=ABC transporter {ECO:0000313|EMBL:EGB67764.1};
InterProE9YCW1 
PFAME9YCW1 
ProdomE9YCW1 
UniProtKBM8NQ73SubName: Full=ABC transporter family protein;
InterProM8NQ73 
PFAMM8NQ73 
ProdomM8NQ73 
UniProtKBM8SEG1SubName: Full=ABC transporter family protein;
InterProM8SEG1 
PFAMM8SEG1 
ProdomM8SEG1 
UniProtKBF9QV22SubName: Full=Putative transporter subunit ATP-binding protein of ABC superfamily;
InterProF9QV22 
PFAMF9QV22 
ProdomF9QV22 
UniProtKBM8SU18SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EMV60543.1};
InterProM8SU18 
PFAMM8SU18 
ProdomM8SU18 
UniProtKBG2AVM5SubName: Full=ABC transporter family protein;
InterProG2AVM5 
PFAMG2AVM5 
ProdomG2AVM5 
UniProtKBG2BA16SubName: Full=ABC transporter family protein;
InterProG2BA16 
PFAMG2BA16 
ProdomG2BA16 
UniProtKBK3JP55SubName: Full=Inner membrane protein MalK;
InterProK3JP55 
PFAMK3JP55 
ProdomK3JP55 
UniProtKBI2R260SubName: Full=Uncharacterized protein;
InterProI2R260 
PFAMI2R260 
ProdomI2R260 
UniProtKBA0A070VE81SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDX48608.1};
InterProA0A070VE81 
PFAMA0A070VE81 
ProdomA0A070VE81 
UniProtKBA0A071ALB4SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY61964.1};
InterProA0A071ALB4 
PFAMA0A071ALB4 
ProdomA0A071ALB4 
UniProtKBA0A071C480SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY91652.1};
InterProA0A071C480 
PFAMA0A071C480 
ProdomA0A071C480 
UniProtKBA0A071CGR4SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDZ18139.1};
InterProA0A071CGR4 
PFAMA0A071CGR4 
ProdomA0A071CGR4 
UniProtKBA0A071DAI9SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDZ38444.1};
InterProA0A071DAI9 
PFAMA0A071DAI9 
ProdomA0A071DAI9 
UniProtKBA0A073GSM4SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEJ68783.1};
InterProA0A073GSM4 
PFAMA0A073GSM4 
ProdomA0A073GSM4 
UniProtKBA0A073TXT5SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEL27032.1};
InterProA0A073TXT5 
PFAMA0A073TXT5 
ProdomA0A073TXT5 
UniProtKBA0A074J3M5SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEO11369.1};
InterProA0A074J3M5 
PFAMA0A074J3M5 
ProdomA0A074J3M5 
UniProtKBA0A079DKC7SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY20917.1};
InterProA0A079DKC7 
PFAMA0A079DKC7 
ProdomA0A079DKC7 
UniProtKBA0A079F870SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY53192.1};
InterProA0A079F870 
PFAMA0A079F870 
ProdomA0A079F870 
UniProtKBA0A070SRX9SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDX20782.1};
InterProA0A070SRX9 
PFAMA0A070SRX9 
ProdomA0A070SRX9 
UniProtKBA0A069Z7E1SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDU54849.1};
InterProA0A069Z7E1 
PFAMA0A069Z7E1 
ProdomA0A069Z7E1 
UniProtKBA0A069XTK3SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDU30917.1};
InterProA0A069XTK3 
PFAMA0A069XTK3 
ProdomA0A069XTK3 
UniProtKBL3TNS4SubName: Full=ABC transporter ATP-binding protein;
InterProL3TNS4 
PFAML3TNS4 
ProdomL3TNS4 
UniProtKBL3UHG4SubName: Full=ABC transporter ATP-binding protein;
InterProL3UHG4 
PFAML3UHG4 
ProdomL3UHG4 
UniProtKBL3VDV0SubName: Full=ABC transporter ATP-binding protein;
InterProL3VDV0 
PFAML3VDV0 
ProdomL3VDV0 
UniProtKBB1XGL7SubName: Full=Predicted transporter subunit: ATP-binding component of ABC superfamily;
InterProB1XGL7 
PFAMB1XGL7 
ProdomB1XGL7 
UniProtKBB2N2L6SubName: Full=ABC transporter, ATP-binding protein;
InterProB2N2L6 
PFAMB2N2L6 
ProdomB2N2L6 
UniProtKBL3ZX67SubName: Full=ABC transporter ATP-binding protein;
InterProL3ZX67 
PFAML3ZX67 
ProdomL3ZX67 
UniProtKBL4WHG5SubName: Full=ABC transporter ATP-binding protein;
InterProL4WHG5 
PFAML4WHG5 
ProdomL4WHG5 
UniProtKBC4ZZB2SubName: Full=Predicted transporter subunit: ATP-binding component of ABC superfamily;
InterProC4ZZB2 
PFAMC4ZZB2 
ProdomC4ZZB2 
UniProtKBA0A029KSS7SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EZJ76388.1};
InterProA0A029KSS7 
PFAMA0A029KSS7 
ProdomA0A029KSS7 
UniProtKBA0A029MR19SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:EZJ99682.1};
InterProA0A029MR19 
PFAMA0A029MR19 
ProdomA0A029MR19 
UniProtKBA0A079FSV0SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY64825.1};
InterProA0A079FSV0 
PFAMA0A079FSV0 
ProdomA0A079FSV0 
UniProtKBE2WPY5SubName: Full=ABC transporter family protein;
InterProE2WPY5 
PFAME2WPY5 
ProdomE2WPY5 
UniProtKBA0A079H2W6SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KDY98946.1};
InterProA0A079H2W6 
PFAMA0A079H2W6 
ProdomA0A079H2W6 
UniProtKBE9XZN9SubName: Full=ABC transporter;
InterProE9XZN9 
PFAME9XZN9 
ProdomE9XZN9 
UniProtKBA0A0E1LY89SubName: Full=Putative ABC superfamily transporter ATP-binding subunit {ECO:0000313|EMBL:AJF56652.1};
InterProA0A0E1LY89 
PFAMA0A0E1LY89 
ProdomA0A0E1LY89 
UniProtKBI2P714SubName: Full=Uncharacterized protein;
InterProI2P714 
PFAMI2P714 
ProdomI2P714 
UniProtKBK3I3L4SubName: Full=Inner membrane protein MalK;
InterProK3I3L4 
PFAMK3I3L4 
ProdomK3I3L4 
UniProtKBL3LF05SubName: Full=ABC transporter ATP-binding protein;
InterProL3LF05 
PFAML3LF05 
ProdomL3LF05 
UniProtKBL3VRI4SubName: Full=ABC transporter ATP-binding protein;
InterProL3VRI4 
PFAML3VRI4 
ProdomL3VRI4 
UniProtKBB3XG22SubName: Full=ABC transporter, ATP-binding protein;
InterProB3XG22 
PFAMB3XG22 
ProdomB3XG22 
UniProtKBL5GCA4SubName: Full=ABC transporter ATP-binding protein;
InterProL5GCA4 
PFAML5GCA4 
ProdomL5GCA4 
UniProtKBC6UJ70SubName: Full=Predicted transporter subunit: ATP-binding component of ABC superfamily;
InterProC6UJ70 
PFAMC6UJ70 
ProdomC6UJ70 
UniProtKBM2MZE4SubName: Full=Putative transporter subunit: ATP-binding component of ABC superfamily protein;
InterProM2MZE4 
PFAMM2MZE4 
ProdomM2MZE4 
UniProtKBM8LQX9SubName: Full=ABC transporter family protein;
InterProM8LQX9 
PFAMM8LQX9 
ProdomM8LQX9 
UniProtKBD8B8V2SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFJ64485.1};
InterProD8B8V2 
PFAMD8B8V2 
ProdomD8B8V2 
UniProtKBA0A080ICA9SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:KEO24413.1};
InterProA0A080ICA9 
PFAMA0A080ICA9 
ProdomA0A080ICA9 
UniProtKBD8AV23SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK12971.1};
InterProD8AV23 
PFAMD8AV23 
ProdomD8AV23 
UniProtKBA0A0A0FFC6SubName: Full=Putative ABC transporter ATP-binding protein YnjD {ECO:0000313|EMBL:KGM61088.1};EC=3.6.3.31 {ECO:0000313|EMBL:KGM61088.1};
InterProA0A0A0FFC6 
PFAMA0A0A0FFC6 
ProdomA0A0A0FFC6 
UniProtKBA8A0U9SubName: Full=ABC transporter, ATP-binding protein;
InterProA8A0U9 
PFAMA8A0U9 
ProdomA8A0U9 
UniProtKBL8CQN6SubName: Full=ABC transporter, ATP-binding protein YnjD;
InterProL8CQN6 
PFAML8CQN6 
ProdomL8CQN6 
UniProtKBM8P4Q0SubName: Full=ABC transporter family protein;
InterProM8P4Q0 
PFAMM8P4Q0 
ProdomM8P4Q0 
UniProtKBA0A0E0TZ53SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AEE56811.1};
InterProA0A0E0TZ53 
PFAMA0A0E0TZ53 
ProdomA0A0E0TZ53 
UniProtKBI4TC46SubName: Full=Putative transporter subunit: ATP-binding component of ABC superfamily protein;
InterProI4TC46 
PFAMI4TC46 
ProdomI4TC46 
UniProtKBG2CKM1SubName: Full=ABC transporter family protein;
InterProG2CKM1 
PFAMG2CKM1 
ProdomG2CKM1 
UniProtKBC5W4X2SubName: Full=ABC transporter related {ECO:0000313|EMBL:ACT28935.1};
InterProC5W4X2 
PFAMC5W4X2 
ProdomC5W4X2 
UniProtKBE1HTL4SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK88729.1};
InterProE1HTL4 
PFAME1HTL4 
ProdomE1HTL4 
UniProtKBE3PNE0SubName: Full=Putative membrane transport protein {ECO:0000313|EMBL:CBJ01292.1};
InterProE3PNE0 
PFAME3PNE0 
ProdomE3PNE0 
UniProtKBE9WFG1SubName: Full=ABC transporter;
InterProE9WFG1 
PFAME9WFG1 
ProdomE9WFG1 
UniProtKBB1IPH4SubName: Full=ABC transporter related;
InterProB1IPH4 
PFAMB1IPH4 
ProdomB1IPH4 
UniProtKBL3WYF5SubName: Full=ABC transporter ATP-binding protein;
InterProL3WYF5 
PFAML3WYF5 
ProdomL3WYF5 
UniProtKBL3RJF3SubName: Full=ABC transporter ATP-binding protein;
InterProL3RJF3 
PFAML3RJF3 
ProdomL3RJF3 
UniProtKBL4P1J5SubName: Full=ABC transporter ATP-binding protein;
InterProL4P1J5 
PFAML4P1J5 
ProdomL4P1J5 
UniProtKBC6ECK1SubName: Full=ABC transporter related {ECO:0000313|EMBL:ACT28935.1};
InterProC6ECK1 
PFAMC6ECK1 
ProdomC6ECK1 
UniProtKBL4JNM7SubName: Full=ABC transporter ATP-binding protein;
InterProL4JNM7 
PFAML4JNM7 
ProdomL4JNM7 
UniProtKBL3QVU3SubName: Full=ABC transporter ATP-binding protein;
InterProL3QVU3 
PFAML3QVU3 
ProdomL3QVU3 
UniProtKBC9QTV2SubName: Full=ABC transporter related protein;SubName: Full=Putative transporter subunit: ATP-binding component of ABC superfamily;
InterProC9QTV2 
PFAMC9QTV2 
ProdomC9QTV2 
UniProtKBD8BTU5SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFI89929.1};
InterProD8BTU5 
PFAMD8BTU5 
ProdomD8BTU5 
UniProtKBL8C4X3SubName: Full=ABC transporter, ATP-binding protein YnjD;
InterProL8C4X3 
PFAML8C4X3 
ProdomL8C4X3 
UniProtKBH0QD73SubName: Full=Predicted transporter subunit;
InterProH0QD73 
PFAMH0QD73 
ProdomH0QD73 
UniProtKBL3EVC3SubName: Full=ABC transporter ATP-binding protein;
InterProL3EVC3 
PFAML3EVC3 
ProdomL3EVC3 
UniProtKBL2Z8D6SubName: Full=ABC transporter ATP-binding protein;
InterProL2Z8D6 
PFAML2Z8D6 
ProdomL2Z8D6 
UniProtKBM8QGU1SubName: Full=ABC transporter family protein;
InterProM8QGU1 
PFAMM8QGU1 
ProdomM8QGU1 
UniProtKBF4MBR8SubName: Full=Putative uncharacterized protein;
InterProF4MBR8 
PFAMF4MBR8 
ProdomF4MBR8 
UniProtKBG0F593SubName: Full=ABC transporter family protein {ECO:0000313|EMBL:AEJ56788.1};
InterProG0F593 
PFAMG0F593 
ProdomG0F593 
UniProtKBM8MMN6SubName: Full=ABC transporter family protein;
InterProM8MMN6 
PFAMM8MMN6 
ProdomM8MMN6 
UniProtKBA0A0E1SXE9SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDU63581.1};
InterProA0A0E1SXE9 
PFAMA0A0E1SXE9 
ProdomA0A0E1SXE9 
UniProtKBH4X5G4SubName: Full=ABC transporter family protein;
InterProH4X5G4 
PFAMH4X5G4 
ProdomH4X5G4 
UniProtKBI0ZSZ0SubName: Full=ABC transporter family protein;
InterProI0ZSZ0 
PFAMI0ZSZ0 
ProdomI0ZSZ0 
UniProtKBI2YN38SubName: Full=ABC transporter, ATP-binding protein;
InterProI2YN38 
PFAMI2YN38 
ProdomI2YN38 
UniProtKBI4JB56SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86465.1};
InterProI4JB56 
PFAMI4JB56 
ProdomI4JB56 
UniProtKBM7VS79SubName: Full=Putative sulfate/thiosulfate transporter subunit: ATP-binding component of ABC transporter;
InterProM7VS79 
PFAMM7VS79 
ProdomM7VS79