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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P77216.1
Original Database ID ref NP_415135.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation ybdn_ecoli recname: full=uncharacterized
protein ybdn
Sequence Length 406

Dataset Information:

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Model Information

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Target Region10-243
Protein Length406
Template PDB Code4bwvA
Template Region91-285
Sequence Identity16%
E-Value0.00000012
GA3410.71
MPQS0.514055
z-DOPE0.76
TSVMod MethodMSALL
TSVMod RMSD10.435
TSVMod NO350.29
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4bwv
DBALI4bwvA 
JenaImageLibrary4bwv 
Target Sequence
UniProtKBH0QBQ0SubName: Full=Conserved protein;
InterProH0QBQ0 
PFAMH0QBQ0 
ProdomH0QBQ0 
UniProtKBF9R3B9SubName: Full=Putative uncharacterized protein;
InterProF9R3B9 
PFAMF9R3B9 
ProdomF9R3B9 
UniProtKBI0ZP54SubName: Full=Uncharacterized protein;
InterProI0ZP54 
PFAMI0ZP54 
ProdomI0ZP54 
UniProtKBF4NMZ5SubName: Full=Immunoglobulin-binding regulator A {ECO:0000313|EMBL:EGJ07436.1};
InterProF4NMZ5 
PFAMF4NMZ5 
ProdomF4NMZ5 
UniProtKBI6ESH1SubName: Full=Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EIQ46963.1};
InterProI6ESH1 
PFAMI6ESH1 
ProdomI6ESH1 
UniProtKBM2N8Q1SubName: Full=Uncharacterized protein;
InterProM2N8Q1 
PFAMM2N8Q1 
ProdomM2N8Q1 
UniProtKBC9R1B7SubName: Full=Phosphoadenosine phosphosulfate reductase;SubName: Full=Uncharacterized protein;
InterProC9R1B7 
PFAMC9R1B7 
ProdomC9R1B7 
UniProtKBP77216RecName: Full=Uncharacterized protein YbdN;
InterProP77216 
PFAMP77216 
ProdomP77216 
UniProtKBC4ZV49SubName: Full=Conserved protein;
InterProC4ZV49 
PFAMC4ZV49 
ProdomC4ZV49 
UniProtKBB1X600SubName: Full=Conserved protein;
InterProB1X600 
PFAMB1X600 
ProdomB1X600 
UniProtKBA0A090JFS7SubName: Full=Phosphoadenosine phosphosulfate reductase family protein;EC=1.8.4.8;SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:AKO56118.1};
InterProA0A090JFS7 
PFAMA0A090JFS7 
ProdomA0A090JFS7 
UniProtKBG2F5P7SubName: Full=Putative uncharacterized protein;
InterProG2F5P7 
PFAMG2F5P7 
ProdomG2F5P7 
UniProtKBC9R1B7SubName: Full=Phosphoadenosine phosphosulfate reductase;SubName: Full=Putative uncharacterized protein ybdN;
InterProC9R1B7 
PFAMC9R1B7 
ProdomC9R1B7 
UniProtKBF4NMZ5SubName: Full=Putative uncharacterized protein;
InterProF4NMZ5 
PFAMF4NMZ5 
ProdomF4NMZ5 
UniProtKBC4ZV49SubName: Full=Conserved protein;
InterProC4ZV49 
PFAMC4ZV49 
ProdomC4ZV49 
UniProtKBG2F5P7SubName: Full=Putative uncharacterized protein;
InterProG2F5P7 
PFAMG2F5P7 
ProdomG2F5P7 
UniProtKBH0QBQ0SubName: Full=Conserved protein;
InterProH0QBQ0 
PFAMH0QBQ0 
ProdomH0QBQ0 
UniProtKBA0A2S5ZPN3SubName: Full=DUF3440 domain-containing protein {ECO:0000313|EMBL:NAG20671.1}SubName: Full=Immunoglobulin-binding regulator {ECO:0000313|EMBL:STJ06469.1}SubName: Full=Phosphoadenosine phosphosulfate r
InterProA0A2S5ZPN3 
PFAMA0A2S5ZPN3 
ProdomA0A2S5ZPN3 
UniProtKBA0A5Q3THE1SubName: Full=DUF3440 domain-containing protein {ECO:0000313|EMBL:QGL43974.1}
InterProA0A5Q3THE1 
PFAMA0A5Q3THE1 
ProdomA0A5Q3THE1 
UniProtKBA0A8F8GY94SubName: Full=Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:QXZ35830.1}
InterProA0A8F8GY94 
PFAMA0A8F8GY94 
ProdomA0A8F8GY94 
UniProtKBI6ESH1SubName: Full=Phosphoadenosine phosphosulfate reductase family protein;
InterProI6ESH1 
PFAMI6ESH1 
ProdomI6ESH1 
UniProtKBA0A8F9MH44SubName: Full=Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:QYE24672.1}
InterProA0A8F9MH44 
PFAMA0A8F9MH44 
ProdomA0A8F9MH44 
UniProtKBI0ZP54SubName: Full=Uncharacterized protein;
InterProI0ZP54 
PFAMI0ZP54 
ProdomI0ZP54 
UniProtKBF9R3B9SubName: Full=Putative uncharacterized protein;
InterProF9R3B9 
PFAMF9R3B9 
ProdomF9R3B9 
UniProtKBB1X600SubName: Full=Conserved protein;
InterProB1X600 
PFAMB1X600 
ProdomB1X600 
UniProtKBP77216RecName: Full=Uncharacterized protein YbdN;
InterProP77216 
PFAMP77216 
ProdomP77216 
UniProtKBP77216.1YBDN_ECOLI RecName: Full=Uncharacterized protein ybdN
InterProP77216.1 
PFAMP77216.1 
ProdomP77216.1 
RefSeqAP_001250.1 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
RefSeqZP_05434421.1 hypothetical protein ShiD9_16691 [Shigella sp. D9]
RefSeqYP_002925678.1 hypothetical protein BWG_0476 [Escherichia coli BW2952]
RefSeqYP_001729605.1 hypothetical protein ECDH10B_0671 [Escherichia coli str. K-12 substr. DH10B]
RefSeqYP_001729504.1 hypothetical protein ECDH10B_0563 [Escherichia coli str. K-12 substr. DH10B]
RefSeqNP_415135.1 conserved protein [Escherichia coli str. K-12 substr. MG1655]
GenPept260450228phosphoadenosine phosphosulfate reductase
GenPept932858499Co-activator of prophage gene expression IbrA
GenPept899730357hypothetical protein ADZ28_03045
GenPept899725985hypothetical protein ADZ27_03045
GenPept899721629hypothetical protein ADS71_03045
GenPept89107470 hypothetical protein [Escherichia coli str. K-12 substr. W3110]
GenPept817590506PAPS reductase-like domain protein
GenPept16128585 conserved protein [Escherichia coli str. K-12 substr. MG1655]
GenPept332104090immunoglobulin-binding regulator A
GenPept359331320conserved protein
GenPept4062219conserved hypothetical protein
GenPept549812124ybdN
GenPept557270996hypothetical protein BN896_0476
GenPept664683023hypothetical protein HQ24_03020
GenPept682118168PAPS reductase-like domain protein
GenPept687671533conserved protein
GenPept687675794conserved protein
GenPept315135270hypothetical protein ECDH1ME8569_0573
GenPept3024984YBDN_ECOLI RecName: Full=Uncharacterized protein ybdN
GenPept169888019conserved protein
GenPept169888120conserved protein
GenPept170080184 hypothetical protein ECDH10B_0563 [Escherichia coli str. K-12 substr. DH10B]
GenPept170080285 hypothetical protein ECDH10B_0671 [Escherichia coli str. K-12 substr. DH10B]
GenPept1778520hypothetical protein
GenPept1786818PAPS reductase-like domain protein
GenPept238860279conserved protein
GenPept238899882 hypothetical protein BWG_0476 [Escherichia coli BW2952]
GenPept256020556 hypothetical protein ShiD9_16691 [Shigella sp. D9]
GenPept730585840hypothetical protein ER2796_614
GenPept731473569hypothetical protein ER3413_614
GenPept808708132hypothetical protein SH08_06850
GenPept808712498hypothetical protein SH03_06855
GenPept808716909hypothetical protein SH06_07160
GenPept808721279hypothetical protein SH04_06845
GenPept808729600hypothetical protein SH07_06850
GenPept808734011hypothetical protein SF31_07160
GenPept817573943PAPS reductase-like domain protein
GenPept817578085PAPS reductase-like domain protein
GenPept817582224PAPS reductase-like domain protein
GenPept817586365PAPS reductase-like domain protein
GenPept808703754hypothetical protein SH02_06805
GenPept732685447hypothetical protein EO53_15220
GenPept7467053H64793 ybdN protein - Escherichia coli
GenPept802134182hypothetical protein b0602
GenPept808699383hypothetical protein SH05_06850
GenBankAAC73703.1 conserved protein [Escherichia coli str. K-12 substr. MG1655]
GenBankACX40650.1 phosphoadenosine phosphosulfate reductase [Escherichia coli DH1]
GenBankACR62277.1 conserved protein [Escherichia coli BW2952]
GenBankACB01827.1 conserved protein [Escherichia coli str. K-12 substr. DH10B]
GenBankACB01726.1 conserved protein [Escherichia coli str. K-12 substr. DH10B]
GenBankAAB40803.1 hypothetical protein [Escherichia coli]