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Sequence Information

Primary Database Link P77268.1
Original Database ID ref NP_416001.1
Organism Escherichia coli, Shigella sonnei, etc.
Annotation ddpd_ecoli recname: full=probable
d,d-dipeptide transport atp-binding
protein dd pd
Sequence Length 328

Dataset Information:

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Model Information

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Target Region5-323
Protein Length328
Template PDB Code4fwiB
Template Region4-321
Sequence Identity32%
E-Value0
GA3411
MPQS1.38276
z-DOPE-0.37
TSVMod MethodMSALL
TSVMod RMSD3.992
TSVMod NO350.788
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

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Template Structure
PDB4fwi
DBALI4fwiB 
JenaImageLibrary4fwi 
Target Sequence
UniProtKBS1PH74SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProS1PH74 
PFAMS1PH74 
ProdomS1PH74 
UniProtKBA0A071CBR6SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDZ14343.1};
InterProA0A071CBR6 
PFAMA0A071CBR6 
ProdomA0A071CBR6 
UniProtKBA0A071DA10SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDZ38259.1};
InterProA0A071DA10 
PFAMA0A071DA10 
ProdomA0A071DA10 
UniProtKBA0A073GW13SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEJ69180.1};
InterProA0A073GW13 
PFAMA0A073GW13 
ProdomA0A073GW13 
UniProtKBA0A073T7F7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEL22203.1};
InterProA0A073T7F7 
PFAMA0A073T7F7 
ProdomA0A073T7F7 
UniProtKBA0A074HTV0SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEN99354.1};
InterProA0A074HTV0 
PFAMA0A074HTV0 
ProdomA0A074HTV0 
UniProtKBA0A079CYJ9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY15103.1};
InterProA0A079CYJ9 
PFAMA0A079CYJ9 
ProdomA0A079CYJ9 
UniProtKBA0A079FDE6SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY54228.1};
InterProA0A079FDE6 
PFAMA0A079FDE6 
ProdomA0A079FDE6 
UniProtKBA0A079FK53SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY59798.1};
InterProA0A079FK53 
PFAMA0A079FK53 
ProdomA0A079FK53 
UniProtKBA0A079HB86SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY98412.1};
InterProA0A079HB86 
PFAMA0A079HB86 
ProdomA0A079HB86 
UniProtKBA0A080GY91SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEN91018.1};
InterProA0A080GY91 
PFAMA0A080GY91 
ProdomA0A080GY91 
UniProtKBA0A071BVH6SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY85446.1};
InterProA0A071BVH6 
PFAMA0A071BVH6 
ProdomA0A071BVH6 
UniProtKBA0A071AM02SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY63343.1};
InterProA0A071AM02 
PFAMA0A071AM02 
ProdomA0A071AM02 
UniProtKBA0A070Y2W1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDX84784.1};
InterProA0A070Y2W1 
PFAMA0A070Y2W1 
ProdomA0A070Y2W1 
UniProtKBI2YI50SubName: Full=Oligopeptide/dipeptide transporter, C-terminal domain protein;
InterProI2YI50 
PFAMI2YI50 
ProdomI2YI50 
UniProtKBI2ZSV2SubName: Full=Oligopeptide/dipeptide transporter, C-terminal domain protein;
InterProI2ZSV2 
PFAMI2ZSV2 
ProdomI2ZSV2 
UniProtKBT7JR50SubName: Full=D-Ala-D-Ala transporter subunit;
InterProT7JR50 
PFAMT7JR50 
ProdomT7JR50 
UniProtKBK3H7T5SubName: Full=D-Ala-D-Ala transporter subunit;
InterProK3H7T5 
PFAMK3H7T5 
ProdomK3H7T5 
UniProtKBK3I3T7SubName: Full=D-Ala-D-Ala transporter subunit;
InterProK3I3T7 
PFAMK3I3T7 
ProdomK3I3T7 
UniProtKBK5G298SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProK5G298 
PFAMK5G298 
ProdomK5G298 
UniProtKBK5HUG7SubName: Full=D-Ala-D-Ala transporter subunit;
InterProK5HUG7 
PFAMK5HUG7 
ProdomK5HUG7 
UniProtKBA0A024L246SubName: Full=D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:KLX05947.1};SubName: Full=D-ala-D-ala transporter subunit {ECO:0000313|EMBL:CDP71511.1};SubName: Full=Oligopeptide/dipeptide ABC transpo
InterProA0A024L246 
PFAMA0A024L246 
ProdomA0A024L246 
UniProtKBA0A069XEP6SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDU28158.1};
InterProA0A069XEP6 
PFAMA0A069XEP6 
ProdomA0A069XEP6 
UniProtKBA0A069YY39SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDU49866.1};
InterProA0A069YY39 
PFAMA0A069YY39 
ProdomA0A069YY39 
UniProtKBA0A080IC12SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEO25310.1};
InterProA0A080IC12 
PFAMA0A080IC12 
ProdomA0A080IC12 
UniProtKBA0A0A0FJ06SubName: Full=Putative D,D-dipeptide transport ATP-binding protein DdpD {ECO:0000313|EMBL:KGM61482.1};
InterProA0A0A0FJ06 
PFAMA0A0A0FJ06 
ProdomA0A0A0FJ06 
UniProtKBN2N5W8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN2N5W8 
PFAMN2N5W8 
ProdomN2N5W8 
UniProtKBN3KYY9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN3KYY9 
PFAMN3KYY9 
ProdomN3KYY9 
UniProtKBN3P067SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN3P067 
PFAMN3P067 
ProdomN3P067 
UniProtKBC4ZWQ3SubName: Full=D-ala-D-ala transporter subunit;
InterProC4ZWQ3 
PFAMC4ZWQ3 
ProdomC4ZWQ3 
UniProtKBS1CGW7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProS1CGW7 
PFAMS1CGW7 
ProdomS1CGW7 
UniProtKBC9QVY4SubName: Full=D-ala-D-ala transporter subunit;SubName: Full=Oligopeptide/dipeptide ABC transporter, ATPase subunit;
InterProC9QVY4 
PFAMC9QVY4 
ProdomC9QVY4 
UniProtKBD8AU03SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK13373.1};
InterProD8AU03 
PFAMD8AU03 
ProdomD8AU03 
UniProtKBL3QWJ1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3QWJ1 
PFAML3QWJ1 
ProdomL3QWJ1 
UniProtKBS1I7G3SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EOW15686.1};
InterProS1I7G3 
PFAMS1I7G3 
ProdomS1I7G3 
UniProtKBB1XE75SubName: Full=D-ala-D-ala transporter subunit; ATP-binding component of ABC superfamily;
InterProB1XE75 
PFAMB1XE75 
ProdomB1XE75 
UniProtKBN2N2K9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN2N2K9 
PFAMN2N2K9 
ProdomN2N2K9 
UniProtKBN2ISU4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:ENA30517.1};
InterProN2ISU4 
PFAMN2ISU4 
ProdomN2ISU4 
UniProtKBN2FCY2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN2FCY2 
PFAMN2FCY2 
ProdomN2FCY2 
UniProtKBA0A0E3MWK3SubName: Full=Putative D,D-dipeptide transport ATP-binding protein DdpD {ECO:0000313|EMBL:AKA90525.1};
InterProA0A0E3MWK3 
PFAMA0A0E3MWK3 
ProdomA0A0E3MWK3 
UniProtKBA0A0G3HLF7SubName: Full=D,D-dipeptide permease system, ATP-binding component protein {ECO:0000313|EMBL:AKK12803.1};
InterProA0A0G3HLF7 
PFAMA0A0G3HLF7 
ProdomA0A0G3HLF7 
UniProtKBM7V5J4SubName: Full=D-ala-D-ala transporter subunit;
InterProM7V5J4 
PFAMM7V5J4 
ProdomM7V5J4 
UniProtKBM7VTJ9SubName: Full=D-ala-D-ala transporter subunit;
InterProM7VTJ9 
PFAMM7VTJ9 
ProdomM7VTJ9 
UniProtKBM8TX87SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8TX87 
PFAMM8TX87 
ProdomM8TX87 
UniProtKBM8U7A4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:EMV61999.1};
InterProM8U7A4 
PFAMM8U7A4 
ProdomM8U7A4 
UniProtKBM8ZFQ8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8ZFQ8 
PFAMM8ZFQ8 
ProdomM8ZFQ8 
UniProtKBM9BGY7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9BGY7 
PFAMM9BGY7 
ProdomM9BGY7 
UniProtKBM9FU77SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9FU77 
PFAMM9FU77 
ProdomM9FU77 
UniProtKBN2EG05SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN2EG05 
PFAMN2EG05 
ProdomN2EG05 
UniProtKBS1K7R9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProS1K7R9 
PFAMS1K7R9 
ProdomS1K7R9 
UniProtKBI2R3N2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProI2R3N2 
PFAMI2R3N2 
ProdomI2R3N2 
UniProtKBL8BYL5SubName: Full=Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) Putative hemine transporter ATP-binding subunit;
InterProL8BYL5 
PFAML8BYL5 
ProdomL8BYL5 
UniProtKBL3EXF7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3EXF7 
PFAML3EXF7 
ProdomL3EXF7 
UniProtKBL3UJG5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3UJG5 
PFAML3UJG5 
ProdomL3UJG5 
UniProtKBE1HL66SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK91339.1};
InterProE1HL66 
PFAME1HL66 
ProdomE1HL66 
UniProtKBL4P0G3SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL4P0G3 
PFAML4P0G3 
ProdomL4P0G3 
UniProtKBF4SIS3SubName: Full=D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:EGI11084.1};
InterProF4SIS3 
PFAMF4SIS3 
ProdomF4SIS3 
UniProtKBM9D4S8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9D4S8 
PFAMM9D4S8 
ProdomM9D4S8 
UniProtKBG2F8B6SubName: Full=D-ala-D-ala transporter subunit;
InterProG2F8B6 
PFAMG2F8B6 
ProdomG2F8B6 
UniProtKBH4UIX8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein {ECO:0000313|EMBL:EHV59528.1};
InterProH4UIX8 
PFAMH4UIX8 
ProdomH4UIX8 
UniProtKBS1A051SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProS1A051 
PFAMS1A051 
ProdomS1A051 
UniProtKBI2HZ64SubName: Full=D-ala-D-ala transporter subunit;
InterProI2HZ64 
PFAMI2HZ64 
ProdomI2HZ64 
UniProtKBT2N656SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProT2N656 
PFAMT2N656 
ProdomT2N656 
UniProtKBI0ZRR4SubName: Full=Putative oligopeptide ABC transporter, ATP-binding protein OppD;
InterProI0ZRR4 
PFAMI0ZRR4 
ProdomI0ZRR4 
UniProtKBN2SP98SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN2SP98 
PFAMN2SP98 
ProdomN2SP98 
UniProtKBH9USL0SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpD {ECO:0000313|EMBL:AFG40503.1};
InterProH9USL0 
PFAMH9USL0 
ProdomH9USL0 
UniProtKBL3TQP5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3TQP5 
PFAML3TQP5 
ProdomL3TQP5 
UniProtKBN2RJ93SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN2RJ93 
PFAMN2RJ93 
ProdomN2RJ93 
UniProtKBS1HZ50SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EOW20745.1};
InterProS1HZ50 
PFAMS1HZ50 
ProdomS1HZ50 
UniProtKBI4J9Z6SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EIF86055.1};
InterProI4J9Z6 
PFAMI4J9Z6 
ProdomI4J9Z6 
UniProtKBD8B249SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFJ66820.1};
InterProD8B249 
PFAMD8B249 
ProdomD8B249 
UniProtKBE9WEL7SubName: Full=ABC transporter;
InterProE9WEL7 
PFAME9WEL7 
ProdomE9WEL7 
UniProtKBG2AUI8SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpD;
InterProG2AUI8 
PFAMG2AUI8 
ProdomG2AUI8 
UniProtKBL4WN34SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL4WN34 
PFAML4WN34 
ProdomL4WN34 
UniProtKBI2P7Q1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProI2P7Q1 
PFAMI2P7Q1 
ProdomI2P7Q1 
UniProtKBI2YDN7SubName: Full=Oligopeptide/dipeptide transporter, C-terminal domain protein;
InterProI2YDN7 
PFAMI2YDN7 
ProdomI2YDN7 
UniProtKBS0W269SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EOU67847.1};
InterProS0W269 
PFAMS0W269 
ProdomS0W269 
UniProtKBG2B969SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpD;
InterProG2B969 
PFAMG2B969 
ProdomG2B969 
UniProtKBL5GCC4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL5GCC4 
PFAML5GCC4 
ProdomL5GCC4 
UniProtKBN2KZF0SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProN2KZF0 
PFAMN2KZF0 
ProdomN2KZF0 
UniProtKBH0QCS8SubName: Full=D-Ala-D-Ala transporter subunit;
InterProH0QCS8 
PFAMH0QCS8 
ProdomH0QCS8 
UniProtKBP77268RecName: Full=Probable D,D-dipeptide transport ATP-binding protein DdpD;
InterProP77268 
PFAMP77268 
ProdomP77268 
UniProtKBH4V0B8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein {ECO:0000313|EMBL:EHV60727.1};
InterProH4V0B8 
PFAMH4V0B8 
ProdomH4V0B8 
UniProtKBH4VFK2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein;
InterProH4VFK2 
PFAMH4VFK2 
ProdomH4VFK2 
UniProtKBH4VVV3SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein;
InterProH4VVV3 
PFAMH4VVV3 
ProdomH4VVV3 
UniProtKBS1KGW5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProS1KGW5 
PFAMS1KGW5 
ProdomS1KGW5 
UniProtKBS0Z7J3SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProS0Z7J3 
PFAMS0Z7J3 
ProdomS0Z7J3 
UniProtKBF9R5T8SubName: Full=D-ala-D-ala transporter subunit;
InterProF9R5T8 
PFAMF9R5T8 
ProdomF9R5T8 
UniProtKBM2NVF1SubName: Full=D-ala-D-ala transporter subunit;
InterProM2NVF1 
PFAMM2NVF1 
ProdomM2NVF1 
UniProtKBS1LYW0SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProS1LYW0 
PFAMS1LYW0 
ProdomS1LYW0 
UniProtKBI4TEL0SubName: Full=D-ala-D-ala transporter subunit;
InterProI4TEL0 
PFAMI4TEL0 
ProdomI4TEL0 
UniProtKBK5BS70SubName: Full=Putative oligopeptide ABC transporter, ATP-binding protein OppD {ECO:0000313|EMBL:EKJ80544.1};
InterProK5BS70 
PFAMK5BS70 
ProdomK5BS70 
UniProtKBL3KPK4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ELE00838.1};
InterProL3KPK4 
PFAML3KPK4 
ProdomL3KPK4 
UniProtKBL3LI71SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3LI71 
PFAML3LI71 
ProdomL3LI71 
UniProtKBD8BRI6SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFI90745.1};
InterProD8BRI6 
PFAMD8BRI6 
ProdomD8BRI6 
UniProtKBL3RL24SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3RL24 
PFAML3RL24 
ProdomL3RL24 
UniProtKBL3ZYQ0SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3ZYQ0 
PFAML3ZYQ0 
ProdomL3ZYQ0 
UniProtKBL3VVV2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3VVV2 
PFAML3VVV2 
ProdomL3VVV2 
UniProtKBE9WST2SubName: Full=ABC transporter;
InterProE9WST2 
PFAME9WST2 
ProdomE9WST2 
UniProtKBL3VID8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3VID8 
PFAML3VID8 
ProdomL3VID8