University of California San Francisco | About UCSF | UCSF Benioff Children's Hospital San Francisco

ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link A0A024L0R0
Original Database ID ref NP_416982.1
Organism Escherichia coli, Shigella sonnei, etc.
Annotation subname: full=hydrogenase 4 membrane
subunit {eco:0000313|embl:kgm82497.1};ec=1.
-.-.- {eco:0000313|embl:kgm82497.1};subname:
full=hydrogenase 4 subun ...
Sequence Length 555

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

The calculation typically takes 1-2 days, and the results will be added to this page. Registered users will receive an email notification.

Information for additional models of this sequences are available by clicking on the model thumbnails below.  

Model Information

Perform action on this model:

Quality criteria indicate whether the model is considered
reliable (green) or unreliable (red).
 
Target Region181-521
Protein Length555
Template PDB Code4omfA
Template Region2-384
Sequence Identity22%
E-Value0
GA3411
MPQS0.792814
z-DOPE-0.3
TSVMod MethodMSALL
TSVMod RMSD5.307
TSVMod NO350.687
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

Mouse over the images for more information

Sequence Model Coverage Summary
for all Models of this Sequence:

Filtered models for current sequence (Show all models)

 

Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4omf
DBALI4omfA 
JenaImageLibrary4omf 
Target Sequence
UniProtKBH0QB59SubName: Full=Hydrogenase 4, subunit;
InterProH0QB59 
PFAMH0QB59 
ProdomH0QB59 
UniProtKBL3V9I4SubName: Full=Hydrogenase-4 component G;
InterProL3V9I4 
PFAML3V9I4 
ProdomL3V9I4 
UniProtKBL3ZSV0SubName: Full=Hydrogenase-4 component G;
InterProL3ZSV0 
PFAML3ZSV0 
ProdomL3ZSV0 
UniProtKBB1IWH3SubName: Full=NADH dehydrogenase (Ubiquinone) 30 kDa subunit;
InterProB1IWH3 
PFAMB1IWH3 
ProdomB1IWH3 
UniProtKBL3QUI2SubName: Full=Hydrogenase-4 component G;
InterProL3QUI2 
PFAML3QUI2 
ProdomL3QUI2 
UniProtKBL8C4K3SubName: Full=Hydrogenase-4 component G;
InterProL8C4K3 
PFAML8C4K3 
ProdomL8C4K3 
UniProtKBB3XDM6SubName: Full=Hydrogenase-4, G subunit;
InterProB3XDM6 
PFAMB3XDM6 
ProdomB3XDM6 
UniProtKBL4WC22SubName: Full=Hydrogenase-4 component G;
InterProL4WC22 
PFAML4WC22 
ProdomL4WC22 
UniProtKBC5W7I9SubName: Full=NADH dehydrogenase (Ubiquinone) 30 kDa subunit {ECO:0000313|EMBL:ACT28267.1};
InterProC5W7I9 
PFAMC5W7I9 
ProdomC5W7I9 
UniProtKBC6EKM4SubName: Full=NADH dehydrogenase (Ubiquinone) 30 kDa subunit {ECO:0000313|EMBL:ACT28267.1};
InterProC6EKM4 
PFAMC6EKM4 
ProdomC6EKM4 
UniProtKBP76974RecName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProP76974 
PFAMP76974 
ProdomP76974 
UniProtKBL3VPB3SubName: Full=Hydrogenase-4 component G;
InterProL3VPB3 
PFAML3VPB3 
ProdomL3VPB3 
UniProtKBI4U1W3SubName: Full=Hydrogenase 4, subunit;
InterProI4U1W3 
PFAMI4U1W3 
ProdomI4U1W3 
UniProtKBI2ZPS1SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
InterProI2ZPS1 
PFAMI2ZPS1 
ProdomI2ZPS1 
UniProtKBT9K616SubName: Full=Hydrogenase-4 component G;
InterProT9K616 
PFAMT9K616 
ProdomT9K616 
UniProtKBH4V417SubName: Full=Hydrogenase 4, large subunit {ECO:0000313|EMBL:EHV55534.1};EC=1.-.-.- {ECO:0000313|EMBL:EHV55534.1};
InterProH4V417 
PFAMH4V417 
ProdomH4V417 
UniProtKBH4VJI9SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProH4VJI9 
PFAMH4VJI9 
ProdomH4VJI9 
UniProtKBT9MQ42SubName: Full=Hydrogenase-4 component G;
InterProT9MQ42 
PFAMT9MQ42 
ProdomT9MQ42 
UniProtKBU0C4K9SubName: Full=Hydrogenase-4 component G;
InterProU0C4K9 
PFAMU0C4K9 
ProdomU0C4K9 
UniProtKBI0ZTT7SubName: Full=Hydrogenase-4 component G;
InterProI0ZTT7 
PFAMI0ZTT7 
ProdomI0ZTT7 
UniProtKBI2I7F2SubName: Full=Hydrogenase 4, subunit;
InterProI2I7F2 
PFAMI2I7F2 
ProdomI2I7F2 
UniProtKBI2Y7X2SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
InterProI2Y7X2 
PFAMI2Y7X2 
ProdomI2Y7X2 
UniProtKBW1BNS3SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:CDK82316.1};EC=1.-.-.- {ECO:0000313|EMBL:CDK82316.1};
InterProW1BNS3 
PFAMW1BNS3 
ProdomW1BNS3 
UniProtKBS1KSG6SubName: Full=Hydrogenase-4 component G;
InterProS1KSG6 
PFAMS1KSG6 
ProdomS1KSG6 
UniProtKBC9QPT7SubName: Full=Hydrogenase 4, subunit;SubName: Full=NADH dehydrogenase (Ubiquinone) 30 kDa subunit;
InterProC9QPT7 
PFAMC9QPT7 
ProdomC9QPT7 
UniProtKBD7ZUF9SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:EFK25461.1};
InterProD7ZUF9 
PFAMD7ZUF9 
ProdomD7ZUF9 
UniProtKBA0A080GJS3SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KEN89482.1};EC=1.-.-.- {ECO:0000313|EMBL:KEN89482.1};
InterProA0A080GJS3 
PFAMA0A080GJS3 
ProdomA0A080GJS3 
UniProtKBA0A080I554SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KEO23060.1};EC=1.-.-.- {ECO:0000313|EMBL:KEO23060.1};
InterProA0A080I554 
PFAMA0A080I554 
ProdomA0A080I554 
UniProtKBA0A0E1M1W7SubName: Full=Hydrogenase 4, subunit {ECO:0000313|EMBL:AJF57343.1};EC=1.-.-.- {ECO:0000313|EMBL:AJF57343.1};
InterProA0A0E1M1W7 
PFAMA0A0E1M1W7 
ProdomA0A0E1M1W7 
UniProtKBA0A0E3H3J7SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:AKA91536.1};EC=1.-.-.- {ECO:0000313|EMBL:AKA91536.1};
InterProA0A0E3H3J7 
PFAMA0A0E3H3J7 
ProdomA0A0E3H3J7 
UniProtKBA0A0G3HUC0SubName: Full=Hydrogenase 4, subunit protein {ECO:0000313|EMBL:AKK15548.1};
InterProA0A0G3HUC0 
PFAMA0A0G3HUC0 
ProdomA0A0G3HUC0 
UniProtKBA0A0H3X6B3SubName: Full=Hydrogenase 4, subunit {ECO:0000313|EMBL:AKM36039.1};
InterProA0A0H3X6B3 
PFAMA0A0H3X6B3 
ProdomA0A0H3X6B3 
UniProtKBT8GSE2SubName: Full=Hydrogenase-4 component G;
InterProT8GSE2 
PFAMT8GSE2 
ProdomT8GSE2 
UniProtKBT8TCE6SubName: Full=Hydrogenase-4 component G;
InterProT8TCE6 
PFAMT8TCE6 
ProdomT8TCE6 
UniProtKBT8XCI0SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:EQX50606.1};
InterProT8XCI0 
PFAMT8XCI0 
ProdomT8XCI0 
UniProtKBT8ZZY9SubName: Full=Hydrogenase-4 component G;
InterProT8ZZY9 
PFAMT8ZZY9 
ProdomT8ZZY9 
UniProtKBA0A079H2K4SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDY97653.1};EC=1.-.-.- {ECO:0000313|EMBL:KDY97653.1};
InterProA0A079H2K4 
PFAMA0A079H2K4 
ProdomA0A079H2K4 
UniProtKBA0A079G6M4SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDY68136.1};EC=1.-.-.- {ECO:0000313|EMBL:KDY68136.1};
InterProA0A079G6M4 
PFAMA0A079G6M4 
ProdomA0A079G6M4 
UniProtKBA0A079FCA4SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDY54460.1};EC=1.-.-.- {ECO:0000313|EMBL:KDY54460.1};
InterProA0A079FCA4 
PFAMA0A079FCA4 
ProdomA0A079FCA4 
UniProtKBA0A024L0R0SubName: Full=Hydrogenase 4 membrane subunit {ECO:0000313|EMBL:KGM82497.1};EC=1.-.-.- {ECO:0000313|EMBL:KGM82497.1};SubName: Full=Hydrogenase 4 subunit {ECO:0000313|EMBL:KGM71021.1};EC=1.-.-.- {ECO:00
InterProA0A024L0R0 
PFAMA0A024L0R0 
ProdomA0A024L0R0 
UniProtKBA0A069XT39SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDU30717.1};EC=1.-.-.- {ECO:0000313|EMBL:KDU30717.1};
InterProA0A069XT39 
PFAMA0A069XT39 
ProdomA0A069XT39 
UniProtKBA0A069Z1A4SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDU52708.1};EC=1.-.-.- {ECO:0000313|EMBL:KDU52708.1};
InterProA0A069Z1A4 
PFAMA0A069Z1A4 
ProdomA0A069Z1A4 
UniProtKBA0A070YFT6SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDX90492.1};EC=1.-.-.- {ECO:0000313|EMBL:KDX90492.1};
InterProA0A070YFT6 
PFAMA0A070YFT6 
ProdomA0A070YFT6 
UniProtKBA0A071ANN2SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDY63662.1};EC=1.-.-.- {ECO:0000313|EMBL:KDY63662.1};
InterProA0A071ANN2 
PFAMA0A071ANN2 
ProdomA0A071ANN2 
UniProtKBA0A071C0G2SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDY90489.1};EC=1.-.-.- {ECO:0000313|EMBL:KDY90489.1};
InterProA0A071C0G2 
PFAMA0A071C0G2 
ProdomA0A071C0G2 
UniProtKBA0A071CJD7SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDZ18553.1};EC=1.-.-.- {ECO:0000313|EMBL:KDZ18553.1};
InterProA0A071CJD7 
PFAMA0A071CJD7 
ProdomA0A071CJD7 
UniProtKBA0A071DIX0SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KDZ36550.1};EC=1.-.-.- {ECO:0000313|EMBL:KDZ36550.1};
InterProA0A071DIX0 
PFAMA0A071DIX0 
ProdomA0A071DIX0 
UniProtKBA0A073H1U0SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KEJ67408.1};EC=1.-.-.- {ECO:0000313|EMBL:KEJ67408.1};
InterProA0A073H1U0 
PFAMA0A073H1U0 
ProdomA0A073H1U0 
UniProtKBA0A073TC87SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:KEL24827.1};EC=1.-.-.- {ECO:0000313|EMBL:KEL24827.1};
InterProA0A073TC87 
PFAMA0A073TC87 
ProdomA0A073TC87 
UniProtKBT9AS50SubName: Full=Hydrogenase-4 component G;
InterProT9AS50 
PFAMT9AS50 
ProdomT9AS50 
UniProtKBK3IPW7SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProK3IPW7 
PFAMK3IPW7 
ProdomK3IPW7 
UniProtKBI2XDN0SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:EII47100.1};
InterProI2XDN0 
PFAMI2XDN0 
ProdomI2XDN0 
UniProtKBL3M3Z0SubName: Full=Hydrogenase-4 component G;
InterProL3M3Z0 
PFAML3M3Z0 
ProdomL3M3Z0 
UniProtKBI4J465SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:EIF84024.1};
InterProI4J465 
PFAMI4J465 
ProdomI4J465 
UniProtKBM7V4M6SubName: Full=Hydrogenase 4, subunit;
InterProM7V4M6 
PFAMM7V4M6 
ProdomM7V4M6 
UniProtKBC6UB94SubName: Full=Hydrogenase 4, subunit;EC=1.-.-.-;
InterProC6UB94 
PFAMC6UB94 
ProdomC6UB94 
UniProtKBD8B9H0SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:EFJ64272.1};
InterProD8B9H0 
PFAMD8B9H0 
ProdomD8B9H0 
UniProtKBS0ZY02SubName: Full=Hydrogenase-4 component G;
InterProS0ZY02 
PFAMS0ZY02 
ProdomS0ZY02 
UniProtKBS1KM19SubName: Full=Hydrogenase-4 component G;
InterProS1KM19 
PFAMS1KM19 
ProdomS1KM19 
UniProtKBP77329RecName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProP77329 
PFAMP77329 
ProdomP77329 
UniProtKBT9II83SubName: Full=Hydrogenase-4 component G;
InterProT9II83 
PFAMT9II83 
ProdomT9II83 
UniProtKBW1ATE1SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:CDK71651.1};EC=1.-.-.- {ECO:0000313|EMBL:CDK71651.1};
InterProW1ATE1 
PFAMW1ATE1 
ProdomW1ATE1 
UniProtKBT9M0D1SubName: Full=Hydrogenase-4 component G;
InterProT9M0D1 
PFAMT9M0D1 
ProdomT9M0D1 
UniProtKBG2BCE5SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProG2BCE5 
PFAMG2BCE5 
ProdomG2BCE5 
UniProtKBK5GJJ3SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProK5GJJ3 
PFAMK5GJJ3 
ProdomK5GJJ3 
UniProtKBG2AXP6SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProG2AXP6 
PFAMG2AXP6 
ProdomG2AXP6 
UniProtKBK3HQ86SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProK3HQ86 
PFAMK3HQ86 
ProdomK3HQ86 
UniProtKBD8AW96SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:EFK12580.1};
InterProD8AW96 
PFAMD8AW96 
ProdomD8AW96 
UniProtKBT7JYJ0SubName: Full=Hydrogenase-4 component G;
InterProT7JYJ0 
PFAMT7JYJ0 
ProdomT7JYJ0 
UniProtKBH4VZH6SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProH4VZH6 
PFAMH4VZH6 
ProdomH4VZH6 
UniProtKBL3KHM9SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:ELD98375.1};
InterProL3KHM9 
PFAML3KHM9 
ProdomL3KHM9 
UniProtKBM2PEF2SubName: Full=Hydrogenase 4 subunit;
InterProM2PEF2 
PFAMM2PEF2 
ProdomM2PEF2 
UniProtKBS0Y1J5SubName: Full=Hydrogenase-4 component G;
InterProS0Y1J5 
PFAMS0Y1J5 
ProdomS0Y1J5 
UniProtKBE6B8Y5SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:EFU96362.1};EC=1.-.-.- {ECO:0000313|EMBL:EFU96362.1};
InterProE6B8Y5 
PFAME6B8Y5 
ProdomE6B8Y5 
UniProtKBG2F0P0SubName: Full=Hydrogenase 4, subunit;
InterProG2F0P0 
PFAMG2F0P0 
ProdomG2F0P0 
UniProtKBH4UMA3SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:EHV57061.1};EC=1.-.-.- {ECO:0000313|EMBL:EHV57061.1};
InterProH4UMA3 
PFAMH4UMA3 
ProdomH4UMA3 
UniProtKBS1L1E9SubName: Full=Hydrogenase-4 component G;
InterProS1L1E9 
PFAMS1L1E9 
ProdomS1L1E9 
UniProtKBS0V747SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:EOU57574.1};
InterProS0V747 
PFAMS0V747 
ProdomS0V747 
UniProtKBD8BWW8SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:EFI88837.1};
InterProD8BWW8 
PFAMD8BWW8 
ProdomD8BWW8 
UniProtKBE1HJB1SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:EFK92028.1};
InterProE1HJB1 
PFAME1HJB1 
ProdomE1HJB1 
UniProtKBS0ZFF3SubName: Full=Hydrogenase-4 component G;
InterProS0ZFF3 
PFAMS0ZFF3 
ProdomS0ZFF3 
UniProtKBS1CL68SubName: Full=Hydrogenase-4 component G;
InterProS1CL68 
PFAMS1CL68 
ProdomS1CL68 
UniProtKBF9QVN9SubName: Full=Hydrogenase 4, subunit;
InterProF9QVN9 
PFAMF9QVN9 
ProdomF9QVN9 
UniProtKBG0FFV1SubName: Full=Hydrogenase-4 component G {ECO:0000313|EMBL:AEJ57703.1};
InterProG0FFV1 
PFAMG0FFV1 
ProdomG0FFV1 
UniProtKBT7ZET0SubName: Full=Hydrogenase-4 component G;
InterProT7ZET0 
PFAMT7ZET0 
ProdomT7ZET0 
UniProtKBG2CNA3SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProG2CNA3 
PFAMG2CNA3 
ProdomG2CNA3 
UniProtKBS1PT54SubName: Full=Hydrogenase-4 component G;
InterProS1PT54 
PFAMS1PT54 
ProdomS1PT54 
UniProtKBS0TWG9SubName: Full=Hydrogenase-4 component G;
InterProS0TWG9 
PFAMS0TWG9 
ProdomS0TWG9 
UniProtKBL4NYV8SubName: Full=Hydrogenase-4 component G;
InterProL4NYV8 
PFAML4NYV8 
ProdomL4NYV8 
UniProtKBH4WDZ2SubName: Full=Hydrogenase 4, large subunit;EC=1.-.-.-;
InterProH4WDZ2 
PFAMH4WDZ2 
ProdomH4WDZ2 
UniProtKBI2YKJ4SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
InterProI2YKJ4 
PFAMI2YKJ4 
ProdomI2YKJ4 
UniProtKBK5GYM7SubName: Full=Hydrogenase-4 component G;EC=1.-.-.-;
InterProK5GYM7 
PFAMK5GYM7 
ProdomK5GYM7 
UniProtKBL3WSN9SubName: Full=Hydrogenase-4 component G;
InterProL3WSN9 
PFAML3WSN9 
ProdomL3WSN9 
UniProtKBL4KC54SubName: Full=Hydrogenase-4 component G;
InterProL4KC54 
PFAML4KC54 
ProdomL4KC54 
UniProtKBB1XAW2SubName: Full=Hydrogenase 4, subunit;
InterProB1XAW2 
PFAMB1XAW2 
ProdomB1XAW2 
UniProtKBC4ZX62SubName: Full=Hydrogenase 4, subunit;
InterProC4ZX62 
PFAMC4ZX62 
ProdomC4ZX62 
UniProtKBM7WHT1SubName: Full=Hydrogenase 4, subunit;
InterProM7WHT1 
PFAMM7WHT1 
ProdomM7WHT1 
UniProtKBT9JIV0SubName: Full=Hydrogenase-4 component G;
InterProT9JIV0 
PFAMT9JIV0 
ProdomT9JIV0 
UniProtKBI2Y7X2SubName: Full=Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
InterProI2Y7X2 
PFAMI2Y7X2 
ProdomI2Y7X2 
UniProtKBI2I7F2SubName: Full=Hydrogenase 4, subunit;
InterProI2I7F2 
PFAMI2I7F2 
ProdomI2I7F2