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Sequence Information

Primary Database Link P77416.1
Original Database ID ref NP_416979.1
Organism Escherichia coli, Shigella dysenteriae, etc.
Annotation hyfd_ecoli recname: full=hydrogenase-4
component d
Sequence Length 479

Dataset Information:

The newest dataset for this sequence was created on 2016-11-09. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region6-474
Protein Length479
Template PDB Code4he8L
Template Region4-460
Sequence Identity30%
E-Value0
GA3411
MPQS1.36962
z-DOPE-0.73
TSVMod MethodMSALL
TSVMod RMSD2.377
TSVMod NO350.812
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB4he8
DBALI4he8L 
JenaImageLibrary4he8 
Target Sequence
UniProtKBI2XD48SubName: Full=Hydrogenase 4 subunit D {ECO:0000313|EMBL:EII46918.1};
InterProI2XD48 
PFAMI2XD48 
ProdomI2XD48 
UniProtKBA0A080GMB1SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:KEN89479.1};
InterProA0A080GMB1 
PFAMA0A080GMB1 
ProdomA0A080GMB1 
UniProtKBA0A0E0U1A5SubName: Full=Hydrogenase-4, subunit D {ECO:0000313|EMBL:AEE57638.1};
InterProA0A0E0U1A5 
PFAMA0A0E0U1A5 
ProdomA0A0E0U1A5 
UniProtKBA0A0E1M029SubName: Full=Hydrogenase 4, membrane subunit {ECO:0000313|EMBL:AJF57340.1};
InterProA0A0E1M029 
PFAMA0A0E1M029 
ProdomA0A0E1M029 
UniProtKBA0A0G3HYJ2SubName: Full=Hydrogenase 4, membrane subunit protein {ECO:0000313|EMBL:AKK18394.1};
InterProA0A0G3HYJ2 
PFAMA0A0G3HYJ2 
ProdomA0A0G3HYJ2 
UniProtKBA0A0H3XBJ8SubName: Full=Hydrogenase 4, membrane subunit {ECO:0000313|EMBL:AKM36036.1};
InterProA0A0H3XBJ8 
PFAMA0A0H3XBJ8 
ProdomA0A0H3XBJ8 
UniProtKBL3SA85SubName: Full=Hydrogenase-4 component D;
InterProL3SA85 
PFAML3SA85 
ProdomL3SA85 
UniProtKBL3VQC8SubName: Full=Hydrogenase-4 component D;
InterProL3VQC8 
PFAML3VQC8 
ProdomL3VQC8 
UniProtKBL3WU03SubName: Full=Hydrogenase-4 component D;
InterProL3WU03 
PFAML3WU03 
ProdomL3WU03 
UniProtKBL4CDN3SubName: Full=Hydrogenase-4 component D;
InterProL4CDN3 
PFAML4CDN3 
ProdomL4CDN3 
UniProtKBL4JKX4SubName: Full=Hydrogenase-4 component D;
InterProL4JKX4 
PFAML4JKX4 
ProdomL4JKX4 
UniProtKBA0A079H4Z0SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:KDY97650.1};
InterProA0A079H4Z0 
PFAMA0A079H4Z0 
ProdomA0A079H4Z0 
UniProtKBA0A073V6T4SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:KEL69929.1};
InterProA0A073V6T4 
PFAMA0A073V6T4 
ProdomA0A073V6T4 
UniProtKBA0A073H888SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:KEJ74268.1};
InterProA0A073H888 
PFAMA0A073H888 
ProdomA0A073H888 
UniProtKBT5TDD4SubName: Full=Hydrogenase-4 component D;
InterProT5TDD4 
PFAMT5TDD4 
ProdomT5TDD4 
UniProtKBI2ZUX6SubName: Full=Hydrogenase 4 subunit D;
InterProI2ZUX6 
PFAMI2ZUX6 
ProdomI2ZUX6 
UniProtKBI4U1W0SubName: Full=Hydrogenase 4 subunit D;
InterProI4U1W0 
PFAMI4U1W0 
ProdomI4U1W0 
UniProtKBK5GVL7SubName: Full=Hydrogenase-4 component D;EC=1.-.-.-;
InterProK5GVL7 
PFAMK5GVL7 
ProdomK5GVL7 
UniProtKBL2U739SubName: Full=Hydrogenase-4 component D;
InterProL2U739 
PFAML2U739 
ProdomL2U739 
UniProtKBL3AAM0SubName: Full=Hydrogenase-4 component D;
InterProL3AAM0 
PFAML3AAM0 
ProdomL3AAM0 
UniProtKBL3CVU2SubName: Full=Hydrogenase-4 component D;
InterProL3CVU2 
PFAML3CVU2 
ProdomL3CVU2 
UniProtKBA0A024KZ71SubName: Full=Hydrogenase 4 subunit D {ECO:0000313|EMBL:CDP70501.1};SubName: Full=Hydrogenase-4 component D {ECO:0000313|EMBL:KLX33848.1};SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), vario
InterProA0A024KZ71 
PFAMA0A024KZ71 
ProdomA0A024KZ71 
UniProtKBA0A071CHN8SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:KDZ18556.1};
InterProA0A071CHN8 
PFAMA0A071CHN8 
ProdomA0A071CHN8 
UniProtKBA0A073GQK8SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:KEJ67405.1};
InterProA0A073GQK8 
PFAMA0A073GQK8 
ProdomA0A073GQK8 
UniProtKBL4LTC8SubName: Full=Hydrogenase-4 component D;
InterProL4LTC8 
PFAML4LTC8 
ProdomL4LTC8 
UniProtKBL4NYE6SubName: Full=Hydrogenase-4 component D;
InterProL4NYE6 
PFAML4NYE6 
ProdomL4NYE6 
UniProtKBS1AEG0SubName: Full=Hydrogenase-4 component D;
InterProS1AEG0 
PFAMS1AEG0 
ProdomS1AEG0 
UniProtKBS1EMA9SubName: Full=Hydrogenase-4 component D;
InterProS1EMA9 
PFAMS1EMA9 
ProdomS1EMA9 
UniProtKBS1JSP6SubName: Full=Hydrogenase-4 component D;
InterProS1JSP6 
PFAMS1JSP6 
ProdomS1JSP6 
UniProtKBL3M4R2SubName: Full=Hydrogenase-4 component D;
InterProL3M4R2 
PFAML3M4R2 
ProdomL3M4R2 
UniProtKBB7N666SubName: Full=Hydrogenase 4, membrane subunit {ECO:0000313|EMBL:CAR13975.1};
InterProB7N666 
PFAMB7N666 
ProdomB7N666 
UniProtKBS1LQV7SubName: Full=Hydrogenase-4 component D;
InterProS1LQV7 
PFAMS1LQV7 
ProdomS1LQV7 
UniProtKBC4ZX59SubName: Full=Hydrogenase 4, membrane subunit;
InterProC4ZX59 
PFAMC4ZX59 
ProdomC4ZX59 
UniProtKBL3QTT5SubName: Full=Hydrogenase-4 component D;
InterProL3QTT5 
PFAML3QTT5 
ProdomL3QTT5 
UniProtKBL3KHM4SubName: Full=Hydrogenase-4 component D {ECO:0000313|EMBL:ELD98372.1};
InterProL3KHM4 
PFAML3KHM4 
ProdomL3KHM4 
UniProtKBS1PB19SubName: Full=Hydrogenase-4 component D;
InterProS1PB19 
PFAMS1PB19 
ProdomS1PB19 
UniProtKBS0XTR6SubName: Full=Hydrogenase-4 component D;
InterProS0XTR6 
PFAMS0XTR6 
ProdomS0XTR6 
UniProtKBS0UFD3SubName: Full=Hydrogenase-4 component D;
InterProS0UFD3 
PFAMS0UFD3 
ProdomS0UFD3 
UniProtKBS0UDX8SubName: Full=Hydrogenase-4 component D;
InterProS0UDX8 
PFAMS0UDX8 
ProdomS0UDX8 
UniProtKBL4WST5SubName: Full=Hydrogenase-4 component D;
InterProL4WST5 
PFAML4WST5 
ProdomL4WST5 
UniProtKBL4XTH7SubName: Full=Hydrogenase-4 component D;
InterProL4XTH7 
PFAML4XTH7 
ProdomL4XTH7 
UniProtKBM7UKU3SubName: Full=Hydrogenase 4, membrane subunit;
InterProM7UKU3 
PFAMM7UKU3 
ProdomM7UKU3 
UniProtKBN2EUK4SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProN2EUK4 
PFAMN2EUK4 
ProdomN2EUK4 
UniProtKBN2IHS5SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProN2IHS5 
PFAMN2IHS5 
ProdomN2IHS5 
UniProtKBN2KL68SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProN2KL68 
PFAMN2KL68 
ProdomN2KL68 
UniProtKBN2RHW7SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProN2RHW7 
PFAMN2RHW7 
ProdomN2RHW7 
UniProtKBN2WRE2SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProN2WRE2 
PFAMN2WRE2 
ProdomN2WRE2 
UniProtKBP76973RecName: Full=Hydrogenase-4 component D;EC=1.-.-.-;
InterProP76973 
PFAMP76973 
ProdomP76973 
UniProtKBP77416RecName: Full=Hydrogenase-4 component D;EC=1.-.-.-;
InterProP77416 
PFAMP77416 
ProdomP77416 
UniProtKBB1XAV9SubName: Full=Hydrogenase 4, membrane subunit;
InterProB1XAV9 
PFAMB1XAV9 
ProdomB1XAV9 
UniProtKBL8C6X1SubName: Full=Hydrogenase-4 component D;
InterProL8C6X1 
PFAML8C6X1 
ProdomL8C6X1 
UniProtKBL3E472SubName: Full=Hydrogenase-4 component D;
InterProL3E472 
PFAML3E472 
ProdomL3E472 
UniProtKBD6ISK0SubName: Full=Hydrogenase 4 subunit D;
InterProD6ISK0 
PFAMD6ISK0 
ProdomD6ISK0 
UniProtKBE1HJA8SubName: Full=NADH-ubiquinone/plastoquinone (Complex I) family protein {ECO:0000313|EMBL:EFK92025.1};
InterProE1HJA8 
PFAME1HJA8 
ProdomE1HJA8 
UniProtKBL4TUH8SubName: Full=Hydrogenase-4 component D;
InterProL4TUH8 
PFAML4TUH8 
ProdomL4TUH8 
UniProtKBF4SHJ8SubName: Full=Hydrogenase-4 component D {ECO:0000313|EMBL:EGI12119.1};
InterProF4SHJ8 
PFAMF4SHJ8 
ProdomF4SHJ8 
UniProtKBN2XZ63SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProN2XZ63 
PFAMN2XZ63 
ProdomN2XZ63 
UniProtKBG2BCE2SubName: Full=Hydrogenase-4 component D;EC=1.-.-.-;
InterProG2BCE2 
PFAMG2BCE2 
ProdomG2BCE2 
UniProtKBG2F0N7SubName: Full=Hydrogenase 4 subunit D;
InterProG2F0N7 
PFAMG2F0N7 
ProdomG2F0N7 
UniProtKBS1NPF1SubName: Full=Hydrogenase-4 component D;
InterProS1NPF1 
PFAMS1NPF1 
ProdomS1NPF1 
UniProtKBS1QGE3SubName: Full=Hydrogenase-4 component D;
InterProS1QGE3 
PFAMS1QGE3 
ProdomS1QGE3 
UniProtKBK5C4U4SubName: Full=Hydrogenase 4 subunit D {ECO:0000313|EMBL:EKJ84176.1};
InterProK5C4U4 
PFAMK5C4U4 
ProdomK5C4U4 
UniProtKBT5VAB7SubName: Full=Hydrogenase-4 component D;
InterProT5VAB7 
PFAMT5VAB7 
ProdomT5VAB7 
UniProtKBS1MBY2SubName: Full=Hydrogenase-4 component D;
InterProS1MBY2 
PFAMS1MBY2 
ProdomS1MBY2 
UniProtKBS1CZ17SubName: Full=Hydrogenase-4 component D;
InterProS1CZ17 
PFAMS1CZ17 
ProdomS1CZ17 
UniProtKBH9UV86SubName: Full=Hydrogenase-4 component D {ECO:0000313|EMBL:AFG41429.1};
InterProH9UV86 
PFAMH9UV86 
ProdomH9UV86 
UniProtKBC9QPU0SubName: Full=Hydrogenase 4 subunit D;SubName: Full=NADH dehydrogenase (Quinone);EC=1.6.99.5;Flags: Precursor;
InterProC9QPU0 
PFAMC9QPU0 
ProdomC9QPU0 
UniProtKBS1C9Y6SubName: Full=Hydrogenase-4 component D;
InterProS1C9Y6 
PFAMS1C9Y6 
ProdomS1C9Y6 
UniProtKBI2I7E9SubName: Full=Hydrogenase 4 subunit D;
InterProI2I7E9 
PFAMI2I7E9 
ProdomI2I7E9 
UniProtKBI4UH77SubName: Full=Hydrogenase 4 subunit D;
InterProI4UH77 
PFAMI4UH77 
ProdomI4UH77 
UniProtKBL3RF79SubName: Full=Hydrogenase-4 component D;
InterProL3RF79 
PFAML3RF79 
ProdomL3RF79 
UniProtKBL4K1E1SubName: Full=Hydrogenase-4 component D;
InterProL4K1E1 
PFAML4K1E1 
ProdomL4K1E1 
UniProtKBG0FFU8SubName: Full=Hydrogenase-4 component D {ECO:0000313|EMBL:AEJ57700.1};
InterProG0FFU8 
PFAMG0FFU8 
ProdomG0FFU8 
UniProtKBL5EZH6SubName: Full=Hydrogenase-4 component D;
InterProL5EZH6 
PFAML5EZH6 
ProdomL5EZH6 
UniProtKBI2R1A1SubName: Full=Hydrogenase-4 component D;
InterProI2R1A1 
PFAMI2R1A1 
ProdomI2R1A1 
UniProtKBI2Y7N2SubName: Full=Hydrogenase 4 subunit D;
InterProI2Y7N2 
PFAMI2Y7N2 
ProdomI2Y7N2 
UniProtKBS1KPE7SubName: Full=Hydrogenase-4 component D;
InterProS1KPE7 
PFAMS1KPE7 
ProdomS1KPE7 
UniProtKBG1YSY6SubName: Full=Hydrogenase-4 component D;EC=1.-.-.-;
InterProG1YSY6 
PFAMG1YSY6 
ProdomG1YSY6 
UniProtKBL5GV33SubName: Full=Hydrogenase-4 component D;
InterProL5GV33 
PFAML5GV33 
ProdomL5GV33 
UniProtKBS0V0Q6SubName: Full=Hydrogenase-4 component D {ECO:0000313|EMBL:EOU57571.1};
InterProS0V0Q6 
PFAMS0V0Q6 
ProdomS0V0Q6 
UniProtKBG2CNA0SubName: Full=Hydrogenase-4 component D;EC=1.-.-.-;
InterProG2CNA0 
PFAMG2CNA0 
ProdomG2CNA0 
UniProtKBS1KCX0SubName: Full=Hydrogenase-4 component D;
InterProS1KCX0 
PFAMS1KCX0 
ProdomS1KCX0 
UniProtKBH0Q8X6SubName: Full=Hydrogenase 4, membrane subunit;
InterProH0Q8X6 
PFAMH0Q8X6 
ProdomH0Q8X6 
UniProtKBH4VZH3SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProH4VZH3 
PFAMH4VZH3 
ProdomH4VZH3 
UniProtKBH4WDY9SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProH4WDY9 
PFAMH4WDY9 
ProdomH4WDY9 
UniProtKBI0ZTU0SubName: Full=Hydrogenase 4 subunit D;
InterProI0ZTU0 
PFAMI0ZTU0 
ProdomI0ZTU0 
UniProtKBS1LG07SubName: Full=Hydrogenase-4 component D;
InterProS1LG07 
PFAMS1LG07 
ProdomS1LG07 
UniProtKBF9QVP2SubName: Full=Hydrogenase 4 subunit D;
InterProF9QVP2 
PFAMF9QVP2 
ProdomF9QVP2 
UniProtKBM2MRL4SubName: Full=Hydrogenase 4 subunit D;
InterProM2MRL4 
PFAMM2MRL4 
ProdomM2MRL4 
UniProtKBK5FU26SubName: Full=NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein;
InterProK5FU26 
PFAMK5FU26 
ProdomK5FU26 
UniProtKBL2Y3J3SubName: Full=Hydrogenase-4 component D;
InterProL2Y3J3 
PFAML2Y3J3 
ProdomL2Y3J3 
UniProtKBL3HFQ1SubName: Full=Hydrogenase-4 component D;
InterProL3HFQ1 
PFAML3HFQ1 
ProdomL3HFQ1 
UniProtKBL3IRJ5SubName: Full=Hydrogenase-4 component D;
InterProL3IRJ5 
PFAML3IRJ5 
ProdomL3IRJ5 
UniProtKBL3RE03SubName: Full=Hydrogenase-4 component D;
InterProL3RE03 
PFAML3RE03 
ProdomL3RE03 
UniProtKBD7JRQ0SubName: Full=Hydrogenase 4 subunit D;
InterProD7JRQ0 
PFAMD7JRQ0 
ProdomD7JRQ0 
UniProtKBL3ZQC3SubName: Full=Hydrogenase-4 component D;
InterProL3ZQC3 
PFAML3ZQC3 
ProdomL3ZQC3 
UniProtKBE6B8Y2SubName: Full=Hydrogenase-4 component D {ECO:0000313|EMBL:EFU96359.1};EC=1.-.-.- {ECO:0000313|EMBL:EFU96359.1};
InterProE6B8Y2 
PFAME6B8Y2 
ProdomE6B8Y2 
UniProtKBF4M6S9SubName: Full=Hydrogenase-4, subunit D;
InterProF4M6S9 
PFAMF4M6S9 
ProdomF4M6S9 
UniProtKBL3TN33SubName: Full=Hydrogenase-4 component D;
InterProL3TN33 
PFAML3TN33 
ProdomL3TN33 
UniProtKBT5QGR4SubName: Full=Hydrogenase-4 component D;
InterProT5QGR4 
PFAMT5QGR4 
ProdomT5QGR4