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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link P77463.1
Original Database ID ref NP_416002.1
Organism Escherichia coli, Escherichia coli K-12, etc.
Annotation ddpc_ecoli recname: full=probable
d,d-dipeptide transport system
permease protei n ddpc
Sequence Length 298

Dataset Information:

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Model Information

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Target Region31-281
Protein Length298
Template PDB Code3d31C
Template Region13-256
Sequence Identity18%
E-Value0
GA3410.17
MPQS0.694082
z-DOPE1.42
TSVMod MethodMTALL
TSVMod RMSD7.35
TSVMod NO350.55
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

Show obsolete/secondary identifiers
Template Structure
PDB3d31modbc from methanosarcina acetivorans
DBALI3d31C 
CATH1.10.3720.10 Domain: 3d31C00 MetI-like domain (98%)
JenaImageLibrary3d31 
Target Sequence
UniProtKBI2ZS82SubName: Full=Putative D,D-dipeptide transport system permease protein DdpC;
InterProI2ZS82 
PFAMI2ZS82 
ProdomI2ZS82 
UniProtKBA0A070Y1E6SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDX84785.1};
InterProA0A070Y1E6 
PFAMA0A070Y1E6 
ProdomA0A070Y1E6 
UniProtKBA0A071BSU9SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDY85447.1};
InterProA0A071BSU9 
PFAMA0A071BSU9 
ProdomA0A071BSU9 
UniProtKBA0A071C9S5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDZ14344.1};
InterProA0A071C9S5 
PFAMA0A071C9S5 
ProdomA0A071C9S5 
UniProtKBA0A071DNZ5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDZ38260.1};
InterProA0A071DNZ5 
PFAMA0A071DNZ5 
ProdomA0A071DNZ5 
UniProtKBA0A073GW81SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KEJ69181.1};
InterProA0A073GW81 
PFAMA0A073GW81 
ProdomA0A073GW81 
UniProtKBA0A073TQ66SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KEL22202.1};
InterProA0A073TQ66 
PFAMA0A073TQ66 
ProdomA0A073TQ66 
UniProtKBA0A074IFQ5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KEN99355.1};
InterProA0A074IFQ5 
PFAMA0A074IFQ5 
ProdomA0A074IFQ5 
UniProtKBA0A079D3U2SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDY15102.1};
InterProA0A079D3U2 
PFAMA0A079D3U2 
ProdomA0A079D3U2 
UniProtKBA0A079H747SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDY98411.1};
InterProA0A079H747 
PFAMA0A079H747 
ProdomA0A079H747 
UniProtKBA0A080GNA8SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KEN91019.1};
InterProA0A080GNA8 
PFAMA0A080GNA8 
ProdomA0A080GNA8 
UniProtKBA0A069YRY7SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDU49867.1};
InterProA0A069YRY7 
PFAMA0A069YRY7 
ProdomA0A069YRY7 
UniProtKBA0A069XKZ3SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:KDU28157.1};
InterProA0A069XKZ3 
PFAMA0A069XKZ3 
ProdomA0A069XKZ3 
UniProtKBL5GD23SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL5GD23 
PFAML5GD23 
ProdomL5GD23 
UniProtKBS0YKD7SubName: Full=D-Ala-D-Ala transporter subunit;
InterProS0YKD7 
PFAMS0YKD7 
ProdomS0YKD7 
UniProtKBK3I3M6SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProK3I3M6 
PFAMK3I3M6 
ProdomK3I3M6 
UniProtKBK3IZB5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProK3IZB5 
PFAMK3IZB5 
ProdomK3IZB5 
UniProtKBL3EXZ1SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3EXZ1 
PFAML3EXZ1 
ProdomL3EXZ1 
UniProtKBL3KRF0SubName: Full=D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:ELE00839.1};
InterProL3KRF0 
PFAML3KRF0 
ProdomL3KRF0 
UniProtKBL3RIZ6SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3RIZ6 
PFAML3RIZ6 
ProdomL3RIZ6 
UniProtKBL3TSH5SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3TSH5 
PFAML3TSH5 
ProdomL3TSH5 
UniProtKBL3WZP8SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3WZP8 
PFAML3WZP8 
ProdomL3WZP8 
UniProtKBL3ZWD1SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3ZWD1 
PFAML3ZWD1 
ProdomL3ZWD1 
UniProtKBL4WNV7SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL4WNV7 
PFAML4WNV7 
ProdomL4WNV7 
UniProtKBA0A0A0FE87SubName: Full=Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:KGM61481.1};
InterProA0A0A0FE87 
PFAMA0A0A0FE87 
ProdomA0A0A0FE87 
UniProtKBA0A0E1LYZ8SubName: Full=D-ala-D-ala transporter subunit {ECO:0000313|EMBL:AJF56318.1};
InterProA0A0E1LYZ8 
PFAMA0A0E1LYZ8 
ProdomA0A0E1LYZ8 
UniProtKBD8AU04SubName: Full=ABC transporter, permease protein {ECO:0000313|EMBL:EFK13374.1};
InterProD8AU04 
PFAMD8AU04 
ProdomD8AU04 
UniProtKBN2FJ60SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2FJ60 
PFAMN2FJ60 
ProdomN2FJ60 
UniProtKBD8B248SubName: Full=ABC transporter, permease protein {ECO:0000313|EMBL:EFJ66819.1};
InterProD8B248 
PFAMD8B248 
ProdomD8B248 
UniProtKBM7VMN1SubName: Full=D-ala-D-ala transporter subunit;
InterProM7VMN1 
PFAMM7VMN1 
ProdomM7VMN1 
UniProtKBL8BYQ3SubName: Full=Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) Putative hemine transporter ATP-binding subunit;
InterProL8BYQ3 
PFAML8BYQ3 
ProdomL8BYQ3 
UniProtKBN4H3G3SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4H3G3 
PFAMN4H3G3 
ProdomN4H3G3 
UniProtKBB1XE76SubName: Full=D-ala-D-ala transporter subunit; membrane component of ABC superfamily;
InterProB1XE76 
PFAMB1XE76 
ProdomB1XE76 
UniProtKBN4HWM5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4HWM5 
PFAMN4HWM5 
ProdomN4HWM5 
UniProtKBC4ZWQ4SubName: Full=D-ala-D-ala transporter subunit;
InterProC4ZWQ4 
PFAMC4ZWQ4 
ProdomC4ZWQ4 
UniProtKBS0VJT5SubName: Full=D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:EOU67848.1};
InterProS0VJT5 
PFAMS0VJT5 
ProdomS0VJT5 
UniProtKBN4E1A5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4E1A5 
PFAMN4E1A5 
ProdomN4E1A5 
UniProtKBN3P3J1SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN3P3J1 
PFAMN3P3J1 
ProdomN3P3J1 
UniProtKBN3L2S4SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN3L2S4 
PFAMN3L2S4 
ProdomN3L2S4 
UniProtKBA0A0E3H2Z5SubName: Full=Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:AKA90526.1};
InterProA0A0E3H2Z5 
PFAMA0A0E3H2Z5 
ProdomA0A0E3H2Z5 
UniProtKBA0A0G3I0B0SubName: Full=D-ala-D-ala transporter subunit protein {ECO:0000313|EMBL:AKK17603.1};
InterProA0A0G3I0B0 
PFAMA0A0G3I0B0 
ProdomA0A0G3I0B0 
UniProtKBN2FSW9SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2FSW9 
PFAMN2FSW9 
ProdomN2FSW9 
UniProtKBN2J3K6SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:ENA30516.1};
InterProN2J3K6 
PFAMN2J3K6 
ProdomN2J3K6 
UniProtKBN2L189SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2L189 
PFAMN2L189 
ProdomN2L189 
UniProtKBN2N6H2SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2N6H2 
PFAMN2N6H2 
ProdomN2N6H2 
UniProtKBN2N9V9SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2N9V9 
PFAMN2N9V9 
ProdomN2N9V9 
UniProtKBN2RHZ5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2RHZ5 
PFAMN2RHZ5 
ProdomN2RHZ5 
UniProtKBN2SP81SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2SP81 
PFAMN2SP81 
ProdomN2SP81 
UniProtKBN3A3K8SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN3A3K8 
PFAMN3A3K8 
ProdomN3A3K8 
UniProtKBC9QVY3SubName: Full=ATP-dependent peptide transporter membrane subunit;SubName: Full=Binding-protein-dependent transport systems inner membrane component;
InterProC9QVY3 
PFAMC9QVY3 
ProdomC9QVY3 
UniProtKBS0ZQE0SubName: Full=D-Ala-D-Ala transporter subunit;
InterProS0ZQE0 
PFAMS0ZQE0 
ProdomS0ZQE0 
UniProtKBN4G5U2SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4G5U2 
PFAMN4G5U2 
ProdomN4G5U2 
UniProtKBL3VG00SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3VG00 
PFAML3VG00 
ProdomL3VG00 
UniProtKBE1HL67SubName: Full=ABC transporter, permease protein {ECO:0000313|EMBL:EFK91340.1};
InterProE1HL67 
PFAME1HL67 
ProdomE1HL67 
UniProtKBE9WEL8SubName: Full=Inner membrane transport system;
InterProE9WEL8 
PFAME9WEL8 
ProdomE9WEL8 
UniProtKBF9R5T7SubName: Full=D-ala-D-ala transporter subunit;
InterProF9R5T7 
PFAMF9R5T7 
ProdomF9R5T7 
UniProtKBM2N160SubName: Full=D-ala-D-ala transporter subunit;
InterProM2N160 
PFAMM2N160 
ProdomM2N160 
UniProtKBN2RQ84SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:ENB25304.1};
InterProN2RQ84 
PFAMN2RQ84 
ProdomN2RQ84 
UniProtKBH0QCS9SubName: Full=D-Ala-D-Ala transporter subunit;
InterProH0QCS9 
PFAMH0QCS9 
ProdomH0QCS9 
UniProtKBN4F2E5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4F2E5 
PFAMN4F2E5 
ProdomN4F2E5 
UniProtKBI0ZRR3SubName: Full=Putative dipeptide ABC transporter, permease protein DppC;
InterProI0ZRR3 
PFAMI0ZRR3 
ProdomI0ZRR3 
UniProtKBI2R3N3SubName: Full=Uncharacterized protein;
InterProI2R3N3 
PFAMI2R3N3 
ProdomI2R3N3 
UniProtKBK5HWY5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProK5HWY5 
PFAMK5HWY5 
ProdomK5HWY5 
UniProtKBI2YHX3SubName: Full=Putative D,D-dipeptide transport system permease protein DdpC;
InterProI2YHX3 
PFAMI2YHX3 
ProdomI2YHX3 
UniProtKBS0UVU3SubName: Full=D-Ala-D-Ala transporter subunit;
InterProS0UVU3 
PFAMS0UVU3 
ProdomS0UVU3 
UniProtKBM9E6I7SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:EMX05470.1};
InterProM9E6I7 
PFAMM9E6I7 
ProdomM9E6I7 
UniProtKBN4HBC3SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4HBC3 
PFAMN4HBC3 
ProdomN4HBC3 
UniProtKBD8BRI7SubName: Full=ABC transporter, permease protein {ECO:0000313|EMBL:EFI90746.1};
InterProD8BRI7 
PFAMD8BRI7 
ProdomD8BRI7 
UniProtKBH9USK9SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:AFG40502.1};
InterProH9USK9 
PFAMH9USK9 
ProdomH9USK9 
UniProtKBI2P7Q0SubName: Full=Uncharacterized protein;
InterProI2P7Q0 
PFAMI2P7Q0 
ProdomI2P7Q0 
UniProtKBK5GSJ3SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProK5GSJ3 
PFAMK5GSJ3 
ProdomK5GSJ3 
UniProtKBM8T7V8SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProM8T7V8 
PFAMM8T7V8 
ProdomM8T7V8 
UniProtKBM9D9C6SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProM9D9C6 
PFAMM9D9C6 
ProdomM9D9C6 
UniProtKBG2B970SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProG2B970 
PFAMG2B970 
ProdomG2B970 
UniProtKBN4FMW0SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4FMW0 
PFAMN4FMW0 
ProdomN4FMW0 
UniProtKBS1AIU8SubName: Full=D-Ala-D-Ala transporter subunit;
InterProS1AIU8 
PFAMS1AIU8 
ProdomS1AIU8 
UniProtKBI2YDN1SubName: Full=Putative D,D-dipeptide transport system permease protein DdpC;
InterProI2YDN1 
PFAMI2YDN1 
ProdomI2YDN1 
UniProtKBG2CM11SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProG2CM11 
PFAMG2CM11 
ProdomG2CM11 
UniProtKBM9G0F6SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProM9G0F6 
PFAMM9G0F6 
ProdomM9G0F6 
UniProtKBN3PRT4SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN3PRT4 
PFAMN3PRT4 
ProdomN3PRT4 
UniProtKBH4UIX9SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:EHV59529.1};
InterProH4UIX9 
PFAMH4UIX9 
ProdomH4UIX9 
UniProtKBH4V0B9SubName: Full=YddQ {ECO:0000313|EMBL:EHV60745.1};
InterProH4V0B9 
PFAMH4V0B9 
ProdomH4V0B9 
UniProtKBH4VFK3SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProH4VFK3 
PFAMH4VFK3 
ProdomH4VFK3 
UniProtKBN4EQH5SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN4EQH5 
PFAMN4EQH5 
ProdomN4EQH5 
UniProtKBI2HZ65SubName: Full=D-ala-D-ala transporter subunit;
InterProI2HZ65 
PFAMI2HZ65 
ProdomI2HZ65 
UniProtKBP77463RecName: Full=Probable D,D-dipeptide transport system permease protein DdpC;
InterProP77463 
PFAMP77463 
ProdomP77463 
UniProtKBI2XCU8SubName: Full=Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:EII46818.1};
InterProI2XCU8 
PFAMI2XCU8 
ProdomI2XCU8 
UniProtKBN2EBE2SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProN2EBE2 
PFAMN2EBE2 
ProdomN2EBE2 
UniProtKBG2AUI9SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProG2AUI9 
PFAMG2AUI9 
ProdomG2AUI9 
UniProtKBG0FFN6SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:AEJ56533.1};
InterProG0FFN6 
PFAMG0FFN6 
ProdomG0FFN6 
UniProtKBI4J9Z7SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EIF86056.1};
InterProI4J9Z7 
PFAMI4J9Z7 
ProdomI4J9Z7 
UniProtKBL2ZAT7SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL2ZAT7 
PFAML2ZAT7 
ProdomL2ZAT7 
UniProtKBL3LKB1SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3LKB1 
PFAML3LKB1 
ProdomL3LKB1 
UniProtKBL3VTK5SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL3VTK5 
PFAML3VTK5 
ProdomL3VTK5 
UniProtKBL4P0C3SubName: Full=D-Ala-D-Ala transporter subunit;
InterProL4P0C3 
PFAML4P0C3 
ProdomL4P0C3 
UniProtKBM8RCJ8SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProM8RCJ8 
PFAMM8RCJ8 
ProdomM8RCJ8 
UniProtKBM7U6S1SubName: Full=D-ala-D-ala transporter subunit;
InterProM7U6S1 
PFAMM7U6S1 
ProdomM7U6S1 
UniProtKBM8TZG7SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC {ECO:0000313|EMBL:EMV62000.1};
InterProM8TZG7 
PFAMM8TZG7 
ProdomM8TZG7 
UniProtKBE9WST3SubName: Full=Inner membrane transport system;
InterProE9WST3 
PFAME9WST3 
ProdomE9WST3 
UniProtKBM9AZY6SubName: Full=Putative D,D-dipeptide transport system permease protein ddpC;
InterProM9AZY6 
PFAMM9AZY6 
ProdomM9AZY6