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ModBase: Database of Comparative Protein Structure Models

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Sequence Information

Primary Database Link P77622
Original Database ID ref NP_416000.1
Organism Escherichia coli, Shigella boydii, etc.
Annotation recname: full=probable d,d-dipeptide
transport atp-binding protein
ddpf;
Sequence Length 308

Dataset Information:

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Model Information

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Target Region5-306
Protein Length308
Template PDB Code4fwiB
Template Region4-318
Sequence Identity31%
E-Value0
GA3411
MPQS1.24552
z-DOPE-0.33
TSVMod MethodMSALL
TSVMod RMSD4.772
TSVMod NO350.748
DatasetMW-e_coli_D1
ModPipe VersionSVN.r1602
Model Date2016-11-09

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Cross-references

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Template Structure
PDB4fwi
DBALI4fwiB 
JenaImageLibrary4fwi 
Target Sequence
UniProtKBM8Z170SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8Z170 
PFAMM8Z170 
ProdomM8Z170 
UniProtKBB1IRX5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATPase subunit;
InterProB1IRX5 
PFAMB1IRX5 
ProdomB1IRX5 
UniProtKBL3QV10SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3QV10 
PFAML3QV10 
ProdomL3QV10 
UniProtKBB2NDR3SubName: Full=Putative ABC transport system ATP-binding protein;
InterProB2NDR3 
PFAMB2NDR3 
ProdomB2NDR3 
UniProtKBA0A070TTH8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDX33597.1};
InterProA0A070TTH8 
PFAMA0A070TTH8 
ProdomA0A070TTH8 
UniProtKBA0A070YCQ8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDX84783.1};
InterProA0A070YCQ8 
PFAMA0A070YCQ8 
ProdomA0A070YCQ8 
UniProtKBA0A071AN20SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY63342.1};
InterProA0A071AN20 
PFAMA0A071AN20 
ProdomA0A071AN20 
UniProtKBA0A071C5B1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY85445.1};
InterProA0A071C5B1 
PFAMA0A071C5B1 
ProdomA0A071C5B1 
UniProtKBA0A071CM74SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDZ14342.1};
InterProA0A071CM74 
PFAMA0A071CM74 
ProdomA0A071CM74 
UniProtKBA0A071DB84SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDZ38258.1};
InterProA0A071DB84 
PFAMA0A071DB84 
ProdomA0A071DB84 
UniProtKBA0A074HXT9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEN99353.1};
InterProA0A074HXT9 
PFAMA0A074HXT9 
ProdomA0A074HXT9 
UniProtKBK5CHQ5SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpF {ECO:0000313|EMBL:EKJ80543.1};
InterProK5CHQ5 
PFAMK5CHQ5 
ProdomK5CHQ5 
UniProtKBA8A040SubName: Full=Putative ABC transport system ATP-binding protein;
InterProA8A040 
PFAMA8A040 
ProdomA8A040 
UniProtKBK3UGC9SubName: Full=Oligopeptide ABC transporter;EC=3.6.3.-;
InterProK3UGC9 
PFAMK3UGC9 
ProdomK3UGC9 
UniProtKBI0ZRR5SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpF;
InterProI0ZRR5 
PFAMI0ZRR5 
ProdomI0ZRR5 
UniProtKBI2HZ63SubName: Full=D-ala-D-ala transporter subunit;
InterProI2HZ63 
PFAMI2HZ63 
ProdomI2HZ63 
UniProtKBM9AXL2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9AXL2 
PFAMM9AXL2 
ProdomM9AXL2 
UniProtKBM9BD89SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9BD89 
PFAMM9BD89 
ProdomM9BD89 
UniProtKBI2XDB6SubName: Full=Oligopeptide/dipeptide transporter, C-terminal domain protein {ECO:0000313|EMBL:EII46986.1};
InterProI2XDB6 
PFAMI2XDB6 
ProdomI2XDB6 
UniProtKBI2YDL6SubName: Full=Oligopeptide/dipeptide transporter, C-terminal domain protein;
InterProI2YDL6 
PFAMI2YDL6 
ProdomI2YDL6 
UniProtKBM9CYJ1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9CYJ1 
PFAMM9CYJ1 
ProdomM9CYJ1 
UniProtKBI4J9Z5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EIF86054.1};
InterProI4J9Z5 
PFAMI4J9Z5 
ProdomI4J9Z5 
UniProtKBK3ITH5SubName: Full=Oligopeptide ABC transporter;EC=3.6.3.-;
InterProK3ITH5 
PFAMK3ITH5 
ProdomK3ITH5 
UniProtKBK3JS87SubName: Full=Oligopeptide ABC transporter;EC=3.6.3.-;
InterProK3JS87 
PFAMK3JS87 
ProdomK3JS87 
UniProtKBA0A079CZ59SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY15104.1};
InterProA0A079CZ59 
PFAMA0A079CZ59 
ProdomA0A079CZ59 
UniProtKBA0A079FHJ5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY54229.1};
InterProA0A079FHJ5 
PFAMA0A079FHJ5 
ProdomA0A079FHJ5 
UniProtKBM8MZR2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8MZR2 
PFAMM8MZR2 
ProdomM8MZR2 
UniProtKBM8PIE8SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8PIE8 
PFAMM8PIE8 
ProdomM8PIE8 
UniProtKBM8PVB2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8PVB2 
PFAMM8PVB2 
ProdomM8PVB2 
UniProtKBM8QDU2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8QDU2 
PFAMM8QDU2 
ProdomM8QDU2 
UniProtKBM8R4Q7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8R4Q7 
PFAMM8R4Q7 
ProdomM8R4Q7 
UniProtKBM8U547SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8U547 
PFAMM8U547 
ProdomM8U547 
UniProtKBM8UXU1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8UXU1 
PFAMM8UXU1 
ProdomM8UXU1 
UniProtKBM8V1A6SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8V1A6 
PFAMM8V1A6 
ProdomM8V1A6 
UniProtKBM8V1Y9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8V1Y9 
PFAMM8V1Y9 
ProdomM8V1Y9 
UniProtKBM8VAN5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8VAN5 
PFAMM8VAN5 
ProdomM8VAN5 
UniProtKBM8MZE9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8MZE9 
PFAMM8MZE9 
ProdomM8MZE9 
UniProtKBM8MBP3SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8MBP3 
PFAMM8MBP3 
ProdomM8MBP3 
UniProtKBM7UWV1SubName: Full=D-ala-D-ala transporter subunit;
InterProM7UWV1 
PFAMM7UWV1 
ProdomM7UWV1 
UniProtKBA0A079FHX9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY59799.1};
InterProA0A079FHX9 
PFAMA0A079FHX9 
ProdomA0A079FHX9 
UniProtKBA0A079H4N7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KDY98413.1};
InterProA0A079H4N7 
PFAMA0A079H4N7 
ProdomA0A079H4N7 
UniProtKBA0A080GTC4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEN91017.1};
InterProA0A080GTC4 
PFAMA0A080GTC4 
ProdomA0A080GTC4 
UniProtKBA0A080I5P3SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEO25309.1};
InterProA0A080I5P3 
PFAMA0A080I5P3 
ProdomA0A080I5P3 
UniProtKBA0A0A0FGJ6SubName: Full=Putative D,D-dipeptide transport ATP-binding protein DdpF {ECO:0000313|EMBL:KGM61483.1};
InterProA0A0A0FGJ6 
PFAMA0A0A0FGJ6 
ProdomA0A0A0FGJ6 
UniProtKBA0A0E1LX04SubName: Full=D,D-dipeptide permease system, ATP-binding component {ECO:0000313|EMBL:AJF56316.1};
InterProA0A0E1LX04 
PFAMA0A0E1LX04 
ProdomA0A0E1LX04 
UniProtKBA0A0E1SVN6SubName: Full=Putative ABC transport system ATP-binding protein {ECO:0000313|EMBL:EDU63635.1};
InterProA0A0E1SVN6 
PFAMA0A0E1SVN6 
ProdomA0A0E1SVN6 
UniProtKBA0A0G3HHL8SubName: Full=D,D-dipeptide permease system, ATP-binding component protein {ECO:0000313|EMBL:AKK12804.1};
InterProA0A0G3HHL8 
PFAMA0A0G3HHL8 
ProdomA0A0G3HHL8 
UniProtKBA0A0H3X4Y2SubName: Full=Putative ABC transport system ATP-binding protein {ECO:0000313|EMBL:AKM34992.1};
InterProA0A0H3X4Y2 
PFAMA0A0H3X4Y2 
ProdomA0A0H3X4Y2 
UniProtKBL8BZX8SubName: Full=Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2);
InterProL8BZX8 
PFAML8BZX8 
ProdomL8BZX8 
UniProtKBM8WHK5SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8WHK5 
PFAMM8WHK5 
ProdomM8WHK5 
UniProtKBH4V0B7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein {ECO:0000313|EMBL:EHV60720.1};
InterProH4V0B7 
PFAMH4V0B7 
ProdomH4V0B7 
UniProtKBL2V3R0SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ELC09045.1};
InterProL2V3R0 
PFAML2V3R0 
ProdomL2V3R0 
UniProtKBI2YIV1SubName: Full=Oligopeptide/dipeptide transporter, C-terminal domain protein;
InterProI2YIV1 
PFAMI2YIV1 
ProdomI2YIV1 
UniProtKBL3LJP3SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3LJP3 
PFAML3LJP3 
ProdomL3LJP3 
UniProtKBB1XE74SubName: Full=D-ala-D-ala transporter subunit; ATP-binding component of ABC superfamily;
InterProB1XE74 
PFAMB1XE74 
ProdomB1XE74 
UniProtKBL3VEY1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3VEY1 
PFAML3VEY1 
ProdomL3VEY1 
UniProtKBK5FZS4SubName: Full=Oligopeptide ABC transporter;EC=3.6.3.-;
InterProK5FZS4 
PFAMK5FZS4 
ProdomK5FZS4 
UniProtKBE2WUH3SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpF;
InterProE2WUH3 
PFAME2WUH3 
ProdomE2WUH3 
UniProtKBM2PNX2SubName: Full=D-ala-D-ala transporter subunit;
InterProM2PNX2 
PFAMM2PNX2 
ProdomM2PNX2 
UniProtKBF9R5T9SubName: Full=D-ala-D-ala transporter subunit;
InterProF9R5T9 
PFAMF9R5T9 
ProdomF9R5T9 
UniProtKBL3VU95SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3VU95 
PFAML3VU95 
ProdomL3VU95 
UniProtKBM8WXC4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8WXC4 
PFAMM8WXC4 
ProdomM8WXC4 
UniProtKBM9CDX0SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9CDX0 
PFAMM9CDX0 
ProdomM9CDX0 
UniProtKBM8ZAY9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8ZAY9 
PFAMM8ZAY9 
ProdomM8ZAY9 
UniProtKBG2F8B7SubName: Full=D-ala-D-ala transporter subunit;
InterProG2F8B7 
PFAMG2F8B7 
ProdomG2F8B7 
UniProtKBL2ZBU2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL2ZBU2 
PFAML2ZBU2 
ProdomL2ZBU2 
UniProtKBG2CM09SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpF;
InterProG2CM09 
PFAMG2CM09 
ProdomG2CM09 
UniProtKBK5H5Y9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProK5H5Y9 
PFAMK5H5Y9 
ProdomK5H5Y9 
UniProtKBE1HL65SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK91338.1};
InterProE1HL65 
PFAME1HL65 
ProdomE1HL65 
UniProtKBM8T6A1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8T6A1 
PFAMM8T6A1 
ProdomM8T6A1 
UniProtKBI2R3N1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProI2R3N1 
PFAMI2R3N1 
ProdomI2R3N1 
UniProtKBL3KR07SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ELE00837.1};
InterProL3KR07 
PFAML3KR07 
ProdomL3KR07 
UniProtKBC4ZWQ2SubName: Full=D-ala-D-ala transporter subunit;
InterProC4ZWQ2 
PFAMC4ZWQ2 
ProdomC4ZWQ2 
UniProtKBL4P0T2SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL4P0T2 
PFAML4P0T2 
ProdomL4P0T2 
UniProtKBM8P754SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8P754 
PFAMM8P754 
ProdomM8P754 
UniProtKBH4UIX7SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein {ECO:0000313|EMBL:EHV59527.1};
InterProH4UIX7 
PFAMH4UIX7 
ProdomH4UIX7 
UniProtKBH4VFK1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein;
InterProH4VFK1 
PFAMH4VFK1 
ProdomH4VFK1 
UniProtKBL4AZG6SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL4AZG6 
PFAML4AZG6 
ProdomL4AZG6 
UniProtKBE3PLY3SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBJ01057.1};
InterProE3PLY3 
PFAME3PLY3 
ProdomE3PLY3 
UniProtKBM8MR84SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8MR84 
PFAMM8MR84 
ProdomM8MR84 
UniProtKBF4SIS2SubName: Full=D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:EGI11083.1};
InterProF4SIS2 
PFAMF4SIS2 
ProdomF4SIS2 
UniProtKBM8NY15SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8NY15 
PFAMM8NY15 
ProdomM8NY15 
UniProtKBG0FFN4SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpF {ECO:0000313|EMBL:AEJ56531.1};
InterProG0FFN4 
PFAMG0FFN4 
ProdomG0FFN4 
UniProtKBG2AUI7SubName: Full=Putative D,D-dipeptide transport ATP-binding protein ddpF;
InterProG2AUI7 
PFAMG2AUI7 
ProdomG2AUI7 
UniProtKBM8TA90SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8TA90 
PFAMM8TA90 
ProdomM8TA90 
UniProtKBH0QCS7SubName: Full=D-Ala-D-Ala transporter subunit;
InterProH0QCS7 
PFAMH0QCS7 
ProdomH0QCS7 
UniProtKBM8SY46SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:EMV61998.1};
InterProM8SY46 
PFAMM8SY46 
ProdomM8SY46 
UniProtKBL3WYT4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3WYT4 
PFAML3WYT4 
ProdomL3WYT4 
UniProtKBD8BRI5SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFI90744.1};
InterProD8BRI5 
PFAMD8BRI5 
ProdomD8BRI5 
UniProtKBD7Y0D2SubName: Full=ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFJ98899.1};
InterProD7Y0D2 
PFAMD7Y0D2 
ProdomD7Y0D2 
UniProtKBM8R699SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8R699 
PFAMM8R699 
ProdomM8R699 
UniProtKBI2SST0SubName: Full=Oligopeptide/dipeptide transporter, C-terminal domain protein {ECO:0000313|EMBL:EIH23851.1};
InterProI2SST0 
PFAMI2SST0 
ProdomI2SST0 
UniProtKBM9DEN4SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM9DEN4 
PFAMM9DEN4 
ProdomM9DEN4 
UniProtKBK3IVH8SubName: Full=Oligopeptide ABC transporter;EC=3.6.3.-;
InterProK3IVH8 
PFAMK3IVH8 
ProdomK3IVH8 
UniProtKBL3HQN0SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3HQN0 
PFAML3HQN0 
ProdomL3HQN0 
UniProtKBL3RIQ9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3RIQ9 
PFAML3RIQ9 
ProdomL3RIQ9 
UniProtKBL3ULM1SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3ULM1 
PFAML3ULM1 
ProdomL3ULM1 
UniProtKBL3TT85SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain;
InterProL3TT85 
PFAML3TT85 
ProdomL3TT85 
UniProtKBC9QVY5SubName: Full=D-ala-D-ala transporter subunit;SubName: Full=Oligopeptide/dipeptide ABC transporter, ATPase subunit;
InterProC9QVY5 
PFAMC9QVY5 
ProdomC9QVY5 
UniProtKBM8WYN9SubName: Full=Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein;
InterProM8WYN9 
PFAMM8WYN9 
ProdomM8WYN9